Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_P23
         (833 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69337-1|CAA93269.1|  401|Caenorhabditis elegans ribosomal prote...   257   8e-69
Z69336-1|CAA93268.1|  401|Caenorhabditis elegans ribosomal prote...   257   8e-69
Z66495-12|CAA91277.1|  401|Caenorhabditis elegans Hypothetical p...   257   8e-69
Z49936-6|CAA90183.1|  401|Caenorhabditis elegans Hypothetical pr...   257   8e-69
Z66495-14|CAH04729.1|  353|Caenorhabditis elegans Hypothetical p...   246   2e-65
Z49936-7|CAH10799.1|  353|Caenorhabditis elegans Hypothetical pr...   246   2e-65
Z66495-15|CAH04728.1|  303|Caenorhabditis elegans Hypothetical p...    63   2e-10
Z49936-8|CAH10798.1|  303|Caenorhabditis elegans Hypothetical pr...    63   2e-10
AF003146-5|AAB54199.1|  299|Caenorhabditis elegans Hypothetical ...    30   1.8  
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne...    29   4.1  

>Z69337-1|CAA93269.1|  401|Caenorhabditis elegans ribosomal protein
           L3 protein.
          Length = 401

 Score =  257 bits (629), Expect = 8e-69
 Identities = 111/174 (63%), Positives = 136/174 (78%)
 Frame = +1

Query: 49  FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
           F  P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6   FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65

Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 408
           K+NKKE+VEAVTI+ETPPMV  GV GY++TP G RAL T+WAEH+SE+ RRRFY NW   
Sbjct: 66  KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125

Query: 409 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQRSPY 570
                      WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQ+  +
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAH 179


>Z69336-1|CAA93268.1|  401|Caenorhabditis elegans ribosomal protein
           L3 protein.
          Length = 401

 Score =  257 bits (629), Expect = 8e-69
 Identities = 111/174 (63%), Positives = 136/174 (78%)
 Frame = +1

Query: 49  FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
           F  P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6   FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65

Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 408
           K+NKKE+VEAVTI+ETPPMV  GV GY++TP G RAL T+WAEH+SE+ RRRFY NW   
Sbjct: 66  KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125

Query: 409 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQRSPY 570
                      WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQ+  +
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAH 179


>Z66495-12|CAA91277.1|  401|Caenorhabditis elegans Hypothetical
           protein F13B10.2a protein.
          Length = 401

 Score =  257 bits (629), Expect = 8e-69
 Identities = 111/174 (63%), Positives = 136/174 (78%)
 Frame = +1

Query: 49  FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
           F  P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6   FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65

Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 408
           K+NKKE+VEAVTI+ETPPMV  GV GY++TP G RAL T+WAEH+SE+ RRRFY NW   
Sbjct: 66  KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125

Query: 409 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQRSPY 570
                      WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQ+  +
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAH 179


>Z49936-6|CAA90183.1|  401|Caenorhabditis elegans Hypothetical
           protein F13B10.2a protein.
          Length = 401

 Score =  257 bits (629), Expect = 8e-69
 Identities = 111/174 (63%), Positives = 136/174 (78%)
 Frame = +1

Query: 49  FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
           F  P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6   FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65

Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 408
           K+NKKE+VEAVTI+ETPPMV  GV GY++TP G RAL T+WAEH+SE+ RRRFY NW   
Sbjct: 66  KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125

Query: 409 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQRSPY 570
                      WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQ+  +
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAH 179


>Z66495-14|CAH04729.1|  353|Caenorhabditis elegans Hypothetical
           protein F13B10.2c protein.
          Length = 353

 Score =  246 bits (602), Expect = 2e-65
 Identities = 107/163 (65%), Positives = 127/163 (77%)
 Frame = +1

Query: 49  FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
           F  P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6   FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65

Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 408
           K+NKKE+VEAVTI+ETPPMV  GV GY++TP G RAL T+WAEH+SE+ RRRFY NW   
Sbjct: 66  KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125

Query: 409 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 537
                      WQDE G+K IE DF K+ +YCS +RVIAHTQM
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168


>Z49936-7|CAH10799.1|  353|Caenorhabditis elegans Hypothetical
           protein F13B10.2c protein.
          Length = 353

 Score =  246 bits (602), Expect = 2e-65
 Identities = 107/163 (65%), Positives = 127/163 (77%)
 Frame = +1

Query: 49  FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
           F  P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6   FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65

Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 408
           K+NKKE+VEAVTI+ETPPMV  GV GY++TP G RAL T+WAEH+SE+ RRRFY NW   
Sbjct: 66  KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125

Query: 409 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 537
                      WQDE G+K IE DF K+ +YCS +RVIAHTQM
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168


>Z66495-15|CAH04728.1|  303|Caenorhabditis elegans Hypothetical
           protein F13B10.2d protein.
          Length = 303

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 26/43 (60%), Positives = 35/43 (81%)
 Frame = +1

Query: 442 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQRSPY 570
           WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQ+  +
Sbjct: 39  WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAH 81



 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 19/29 (65%), Positives = 22/29 (75%)
 Frame = +1

Query: 49  FQHPXHGSMGFYPKKRSRRHRGKVKAFPK 135
           F  P HG MGF PKKRSR +RG++KAF K
Sbjct: 6   FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34


>Z49936-8|CAH10798.1|  303|Caenorhabditis elegans Hypothetical
           protein F13B10.2d protein.
          Length = 303

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 26/43 (60%), Positives = 35/43 (81%)
 Frame = +1

Query: 442 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQRSPY 570
           WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQ+  +
Sbjct: 39  WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAH 81



 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 19/29 (65%), Positives = 22/29 (75%)
 Frame = +1

Query: 49  FQHPXHGSMGFYPKKRSRRHRGKVKAFPK 135
           F  P HG MGF PKKRSR +RG++KAF K
Sbjct: 6   FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34


>AF003146-5|AAB54199.1|  299|Caenorhabditis elegans Hypothetical
           protein F56F4.2 protein.
          Length = 299

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +1

Query: 274 TPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 402
           T P     + GY++   G+R    VW E  S+   +   KNW+
Sbjct: 201 TDPNGYFDIAGYVDQSSGVRGRFWVWHECFSQKYHKDPCKNWF 243


>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
            neurexin-like protein 1 protein.
          Length = 1655

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +3

Query: 255  GCHHHRDSSDGLCRCCWIH*DPSWTTRSVDCLGGAYV*RLSTSLLQKLVQMQEEGF 422
            GC      + G C   W + DPS  T + DC   +Y    ++  L + V M+  GF
Sbjct: 1160 GCSSITCLNGGHCSVAWANTDPSAATTTCDCSRTSYT--GASCSLDEGVHMERSGF 1213


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,975,560
Number of Sequences: 27780
Number of extensions: 331486
Number of successful extensions: 721
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)