Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_P21
(773 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.40
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.40
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.40
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 26 1.9
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 28 6.4
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.40
Identities = 23/79 (29%), Positives = 23/79 (29%)
Frame = -3
Query: 759 PXPPPGXXGXXXAXXXXTPPPPPGGXXXKIXFFFXXXXXRXFFFFXTPPPXXXXXXXXXR 580
P PPP G PPPPPGG PPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPP---------------ISGGPPPPPPPPGGCPP 770
Query: 579 XXPXFXXXXXXGGXPPPPP 523
P GG PPPPP
Sbjct: 771 PPPPPPPGGFKGGPPPPPP 789
Score = 28.3 bits (60), Expect = 6.4
Identities = 24/84 (28%), Positives = 24/84 (28%)
Frame = -3
Query: 759 PXPPPGXXGXXXAXXXXTPPPPPGGXXXKIXFFFXXXXXRXFFFFXTPPPXXXXXXXXXR 580
P PPPG PPPPPGG PPP
Sbjct: 713 PPPPPGLPPITGGPP---PPPPPGGLPPITG--------------GPPPPPPPGGLPPIS 755
Query: 579 XXPXFXXXXXXGGXPPPPPXXXGG 508
P G PPPPP GG
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGG 779
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.40
Identities = 23/79 (29%), Positives = 23/79 (29%)
Frame = -3
Query: 759 PXPPPGXXGXXXAXXXXTPPPPPGGXXXKIXFFFXXXXXRXFFFFXTPPPXXXXXXXXXR 580
P PPP G PPPPPGG PPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPP---------------ISGGPPPPPPPPGGCPP 770
Query: 579 XXPXFXXXXXXGGXPPPPP 523
P GG PPPPP
Sbjct: 771 PPPPPPPGGFKGGPPPPPP 789
Score = 28.3 bits (60), Expect = 6.4
Identities = 24/84 (28%), Positives = 24/84 (28%)
Frame = -3
Query: 759 PXPPPGXXGXXXAXXXXTPPPPPGGXXXKIXFFFXXXXXRXFFFFXTPPPXXXXXXXXXR 580
P PPPG PPPPPGG PPP
Sbjct: 713 PPPPPGLPPITGGPP---PPPPPGGLPPITG--------------GPPPPPPPGGLPPIS 755
Query: 579 XXPXFXXXXXXGGXPPPPPXXXGG 508
P G PPPPP GG
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGG 779
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.40
Identities = 23/79 (29%), Positives = 23/79 (29%)
Frame = -3
Query: 759 PXPPPGXXGXXXAXXXXTPPPPPGGXXXKIXFFFXXXXXRXFFFFXTPPPXXXXXXXXXR 580
P PPP G PPPPPGG PPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPP---------------ISGGPPPPPPPPGGCPP 353
Query: 579 XXPXFXXXXXXGGXPPPPP 523
P GG PPPPP
Sbjct: 354 PPPPPPPGGFKGGPPPPPP 372
Score = 28.3 bits (60), Expect = 6.4
Identities = 24/84 (28%), Positives = 24/84 (28%)
Frame = -3
Query: 759 PXPPPGXXGXXXAXXXXTPPPPPGGXXXKIXFFFXXXXXRXFFFFXTPPPXXXXXXXXXR 580
P PPPG PPPPPGG PPP
Sbjct: 296 PPPPPGLPPITGGPP---PPPPPGGLPPITG--------------GPPPPPPPGGLPPIS 338
Query: 579 XXPXFXXXXXXGGXPPPPPXXXGG 508
P G PPPPP GG
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGG 362
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 26.2 bits (55), Expect(2) = 1.9
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = -3
Query: 618 PPPXXXXXXXXXRXXPXFXXXXXXGGXPPPPPXXXGGXG 502
PPP P GG PPPPP G G
Sbjct: 563 PPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGGLMG 601
Score = 22.2 bits (45), Expect(2) = 1.9
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = -3
Query: 753 PPPGXXGXXXAXXXXTPPPPP 691
PPP G A P PPP
Sbjct: 543 PPPPIAGLLAANGTNVPIPPP 563
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 759 PXPPPGXXGXXXAXXXXTPPPPPGG 685
P PPP PPPPPGG
Sbjct: 794 PPPPPPLPPISSGAPPPPPPPPPGG 818
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 759 PXPPPGXXGXXXAXXXXTPPPPPGG 685
P PPP PPPPPGG
Sbjct: 794 PPPPPPLPPISSGAPPPPPPPPPGG 818
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.148 0.491
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,349,196
Number of Sequences: 27780
Number of extensions: 235801
Number of successful extensions: 1011
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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