Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_P18
(783 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0373 + 2783596-2784933 31 0.78
01_06_1411 + 37127098-37128279 31 1.0
02_04_0452 + 23044190-23045227 30 1.8
06_03_0372 - 20013078-20013533,20013969-20014062,20014247-20014422 29 3.2
02_01_0219 - 1437685-1437723,1437932-1438091,1438385-1438514,143... 29 3.2
04_01_0041 - 464695-464850,467485-469029 29 5.5
01_05_0227 - 19512866-19514983 29 5.5
01_03_0259 - 14312197-14312259,14312384-14312456,14312651-143127... 29 5.5
02_05_0788 + 31758119-31758384,31758482-31758634,31759385-317595... 28 7.3
12_02_0985 + 25052753-25053691 28 9.6
09_02_0602 - 11118788-11119178,11119262-11119451,11119590-111196... 28 9.6
05_03_0637 - 16465433-16466242 28 9.6
>07_01_0373 + 2783596-2784933
Length = 445
Score = 31.5 bits (68), Expect = 0.78
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = -2
Query: 161 EEEKALTKEGMAEAAETXKGTISSMNRS 78
E+++ LTK G + +ET KG++ S++RS
Sbjct: 151 EQQQQLTKSGCSSTSETSKGSVLSLSRS 178
>01_06_1411 + 37127098-37128279
Length = 393
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 609 PLRSRLHQPDHQXPXSIHQPPRLNIHFHQSLNAVLK 716
P+ R H PDH +H PR +H SL L+
Sbjct: 104 PVYRRGHHPDHDHDPLLHPLPRQELHLDPSLRRALR 139
>02_04_0452 + 23044190-23045227
Length = 345
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 549 HPFILSHYYWRSRPYASSHPPLRSRLHQPDHQXPXSIHQPP 671
H +L H+ +A SH SR H P + P S PP
Sbjct: 166 HGCLLLHHAGHGHGHAHSHSHSHSRAHNPSTRPPTSAPPPP 206
>06_03_0372 - 20013078-20013533,20013969-20014062,20014247-20014422
Length = 241
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -3
Query: 211 VAYPWNAQTGYQFEGVWKKRKH*PRREWPKRQKRXKAQFLP*IGHQKSSCKTPS 50
+A P+ QTG + E K+ K+ P++ +R K +L GH + + PS
Sbjct: 105 IATPYRPQTGGKVETYNKQIKNIPQKAVNERGKHGSISYLMLFGHVEPHTRRPS 158
>02_01_0219 -
1437685-1437723,1437932-1438091,1438385-1438514,
1438627-1438696,1439264-1439407,1439771-1439837,
1439970-1440019,1440386-1440559,1440881-1440934,
1441008-1441112
Length = 330
Score = 29.5 bits (63), Expect = 3.2
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +1
Query: 352 TETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSL--KIPVTVDLCWTTADVT 525
TE +N V V L SS GY D + ++ V + K+ V +D TAD++
Sbjct: 167 TEAGANRVLVCDLH--SSQAMGYFDIPVDHVYGQVMNLIGDVRGKVAVMMDDMIDTADIS 224
Query: 526 VEGVNVLATPSSSRITIGGLALMHQ 600
+ +N+L P G L+HQ
Sbjct: 225 LPNINILMKPIKLGTIAKGAELLHQ 249
>04_01_0041 - 464695-464850,467485-469029
Length = 566
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 313 IIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPS-APSLKIPV 489
+I R + D++ T +SN + V +LP VSS + Y D ++ + P P ++ V
Sbjct: 40 LISVFRPFTDVSLTLCRSNYIGVTNLPIVSSECEAYYDDFVSGADFTARPQVVPPWRLAV 99
Query: 490 TVD 498
+D
Sbjct: 100 PLD 102
>01_05_0227 - 19512866-19514983
Length = 705
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -2
Query: 530 STVTSAVVQQRSTVTGILRLGAEGKTTASRL 438
S +T + +QQ + ++ LG GKTT ++L
Sbjct: 18 SKLTESSIQQNIKIVSVIGLGGSGKTTLAKL 48
>01_03_0259 -
14312197-14312259,14312384-14312456,14312651-14312754,
14313073-14313192,14313278-14313364,14313925-14314023,
14314110-14314203,14314298-14314368,14315258-14316040
Length = 497
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +3
Query: 582 SRPYASSHPPLRSRLHQPDHQXPXSIHQPPRL 677
S YASS PP R R P P IH P R+
Sbjct: 84 STSYASSLPPSRLRRLPPPPPHPRPIHGPQRV 115
>02_05_0788 +
31758119-31758384,31758482-31758634,31759385-31759509,
31759650-31759678,31760943-31761008,31761059-31761125,
31761226-31761370,31761404-31761451,31762014-31762182,
31762645-31762779,31762858-31763064,31763608-31763735,
31763815-31763866,31764046-31764060,31764502-31764609
Length = 570
Score = 28.3 bits (60), Expect = 7.3
Identities = 21/86 (24%), Positives = 36/86 (41%)
Frame = +1
Query: 304 QRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 483
Q I + ++ L N TV + N + GY+ +N+ + PSLK
Sbjct: 198 QVFCIVLEMFFYQLLQLLKVPNEKTVNVIENAIQTLPGYQPPKHINIGEYISSHVPSLK- 256
Query: 484 PVTVDLCWTTADVTVEGVNVLATPSS 561
D C T ++ +EG++ L S+
Sbjct: 257 ----DFCEPTVEM-LEGMSALKALST 277
>12_02_0985 + 25052753-25053691
Length = 312
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -2
Query: 593 IRARPPIVMREDEGVASTLTPSTVTSAVVQQRSTVTGILRLGAEGKTTASRLTRYASR*P 414
+ +R + +R D S+ + +T S + S + GAEG TTAS LT S P
Sbjct: 127 VSSRTGLFLRGDCHRNSSASNATNCSIPAETMSRMVPTASCGAEGNTTASALTCVTSTSP 186
>09_02_0602 -
11118788-11119178,11119262-11119451,11119590-11119658,
11119890-11120016,11120134-11120399,11120760-11120872,
11121693-11121764,11121860-11121998,11124277-11124360,
11125278-11125771,11127604-11128187
Length = 842
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 64 NWISDDLFMEEIVPLXVSAASAIPSLVNAFSSSKPPQTDNPSARSMD 204
+WIS + + + L + +S +P +VNAF DNPS D
Sbjct: 313 DWISAETSGKYNITLAATDSSQLPPIVNAFEVYGRIPLDNPSTFPTD 359
>05_03_0637 - 16465433-16466242
Length = 269
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 594 ASSHPPLRSRLHQPDHQXPXSIHQP 668
++S PPLR L +P H P HQP
Sbjct: 132 STSAPPLRPLLPRPPHLHPAFHHQP 156
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,469,310
Number of Sequences: 37544
Number of extensions: 402882
Number of successful extensions: 1055
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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