Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_P13
(786 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1033 - 27035977-27036144,27036420-27036544,27036695-270367... 146 2e-35
07_01_0747 - 5724586-5724648,5725229-5725309,5725564-5725656,572... 139 3e-33
11_05_0099 - 19044772-19044837,19044896-19045051,19045529-190456... 98 6e-21
11_05_0100 - 19056465-19056470,19057043-19057276,19058391-190585... 91 1e-18
07_03_1329 + 25844335-25845000 29 4.2
10_08_0980 - 22002818-22003008,22003646-22003750,22003859-220039... 29 5.5
04_04_1310 - 32517074-32517193,32517295-32517360,32517468-325175... 29 5.5
06_03_1041 - 27086661-27086981,27087089-27087295,27087398-270876... 28 9.7
>06_03_1033 -
27035977-27036144,27036420-27036544,27036695-27036766,
27036872-27036976,27037513-27037567,27038196-27038276,
27039109-27039159,27039531-27039594,27040783-27040850,
27040993-27041079,27041401-27041655,27041768-27041890,
27042013-27042297,27042948-27043087,27043696-27043759,
27043929-27044048
Length = 620
Score = 146 bits (353), Expect = 2e-35
Identities = 76/206 (36%), Positives = 120/206 (58%)
Frame = +1
Query: 169 LQALRALMSSQRPVLAAYITPTADAHNSEYIDAADARREWISAFTGSAGTAVVTSSQALV 348
L LRALM++ P L A + P+ DAH SEY+ D RR+++S FTGSAG A++T +AL+
Sbjct: 14 LDELRALMAAHSPSLHALVVPSEDAHQSEYVSERDKRRQFVSGFTGSAGLALITMKEALL 73
Query: 349 WTDGRYYTQFEREVDLSAWTLMKQTLPDTPTLEKWLASNLKDGDVVGVDPQTMTRDEWTP 528
WTDGRY+ Q E+++ + W LM+ + + P +E W+A NL D V+G++P ++ D
Sbjct: 74 WTDGRYFLQAEQQL-TNRWKLMR--MGEDPPVEVWIADNLSDEAVIGINPWCISVDTAQR 130
Query: 529 IQTALKKISAQLVPISNNLVDDVRIELGDPAPKRSHNELAPLHVRYTGRTAGEKIAELRR 708
+ A K L +S++LVD E+ P + + V Y G + EK+ ELR
Sbjct: 131 YEHAFSKKHQTLFQLSSDLVD----EIWKDRPPVNALPVFVQPVEYAGCSVTEKLKELRE 186
Query: 709 KMAEXKASALVLTGLXDIAYXLNLXG 786
K+ KA +++ L ++A+ N+ G
Sbjct: 187 KLQHEKARGIIIAALDEVAWLYNIRG 212
>07_01_0747 -
5724586-5724648,5725229-5725309,5725564-5725656,
5725775-5725929,5726023-5726131,5726291-5726481,
5727463-5727614,5728453-5728728,5729415-5729587,
5730023-5730298,5730839-5730958,5731051-5731176,
5731629-5731970
Length = 718
Score = 139 bits (336), Expect = 3e-33
Identities = 75/209 (35%), Positives = 123/209 (58%), Gaps = 1/209 (0%)
Frame = +1
Query: 163 QRLQALRALMSSQRPVLAAYITPTADAHNSEYIDAADARREWISAFTGSAGTAVVTSSQA 342
++L++LR L++ + AYI P+ DAH SE+I RR +++ FTGSAGTAVVT +A
Sbjct: 86 EKLRSLRRLLARPDVAIDAYIVPSQDAHQSEFIAECFMRRAYLTGFTGSAGTAVVTKDKA 145
Query: 343 LVWTDGRYYTQFEREVDLSAWTLMKQTLPDTPTLEKWLASNLKDGDVVGVDPQTMTRDEW 522
+WTDGRY+ Q E+E+ WTLM+ PT +WL L G VG+DP + D
Sbjct: 146 ALWTDGRYFLQAEKELS-HDWTLMRSGNQGVPTTSEWLNEVLPSGCRVGIDPFLFSFDAA 204
Query: 523 TPIQTALKKISAQLVPISN-NLVDDVRIELGDPAPKRSHNELAPLHVRYTGRTAGEKIAE 699
++ A+ + + +LV I + NLVD++ G+ P+ + ++Y G K++
Sbjct: 205 EELKDAISEKNHELVLIKDLNLVDEI---WGESRPEPPKEQTRVHGIKYAGVDVPSKLSF 261
Query: 700 LRRKMAEXKASALVLTGLXDIAYXLNLXG 786
+R ++AE +A+V++ L ++A+ LN+ G
Sbjct: 262 VRSQLAENGCNAVVISLLDEVAWLLNMRG 290
>11_05_0099 -
19044772-19044837,19044896-19045051,19045529-19045653,
19045773-19045844,19045947-19046051,19046509-19046563,
19047334-19047414,19047499-19047633,19048279-19048342,
19048844-19048911,19049082-19049168,19050247-19050501,
19050616-19050738,19050866-19051150,19051712-19051851,
19052385-19052445,19052537-19052637,19052807-19052870,
19053020-19053127
Length = 716
Score = 98.3 bits (234), Expect = 6e-21
Identities = 53/158 (33%), Positives = 85/158 (53%)
Frame = +1
Query: 313 GTAVVTSSQALVWTDGRYYTQFEREVDLSAWTLMKQTLPDTPTLEKWLASNLKDGDVVGV 492
G A++T +AL+WTDGRY+ Q E+++ W LM+ + + P +E W+A NL D VVG+
Sbjct: 112 GLALITMKEALLWTDGRYFLQAEQQLS-DRWKLMR--MGEDPPVEVWIADNLSDEAVVGI 168
Query: 493 DPQTMTRDEWTPIQTALKKISAQLVPISNNLVDDVRIELGDPAPKRSHNELAPLHVRYTG 672
+P ++ D + A K L +S++L+D E+ P + V Y G
Sbjct: 169 NPWCISVDTAQRYEHAFSKKHQTLFQLSSDLID----EIWKDRPSAEALPVFVQPVEYAG 224
Query: 673 RTAGEKIAELRRKMAEXKASALVLTGLXDIAYXLNLXG 786
RT EK+ ELR K KA +++ L ++A+ N+ G
Sbjct: 225 RTVTEKLKELREKFLHEKARGIIIAALDEVAWLYNIRG 262
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +1
Query: 169 LQALRALMSSQRPVLAAYITPTADAHNSEYIDAADARREWISAFTGSAGTAV--VTSSQA 342
L LRALM++ P L A + P+ DAH SEY+ D RR+++S FTGSA + V ++
Sbjct: 10 LDELRALMAAHSPPLHALVVPSEDAHQSEYVSERDKRRQFVSGFTGSADGTIGWVRVAEV 69
Query: 343 LVWTDGRYYTQFEREV 390
W Y + V
Sbjct: 70 GRWNGRHVYAMLAKVV 85
>11_05_0100 -
19056465-19056470,19057043-19057276,19058391-19058546,
19059639-19059763,19059912-19059983,19060080-19060184,
19060691-19060745,19061576-19061656,19062806-19062869,
19064715-19064782,19064947-19065033,19066121-19066285,
19066310-19066429,19066485-19066607,19066738-19067019,
19067936-19068075,19068234-19068335,19068802-19068874,
19069061-19069171
Length = 722
Score = 90.6 bits (215), Expect = 1e-18
Identities = 52/165 (31%), Positives = 89/165 (53%)
Frame = +1
Query: 292 SAFTGSAGTAVVTSSQALVWTDGRYYTQFEREVDLSAWTLMKQTLPDTPTLEKWLASNLK 471
+ FT G A++T +AL+WTDGRY+ Q E+++ W LM + + P +E W+A NL
Sbjct: 89 TTFTIWGGLALITMKEALLWTDGRYFLQAEKQLS-DHWELM--CMGEDPPVEVWIADNLS 145
Query: 472 DGDVVGVDPQTMTRDEWTPIQTALKKISAQLVPISNNLVDDVRIELGDPAPKRSHNELAP 651
D V+G++P ++ D + A K L +S++LVD+V D + + P
Sbjct: 146 DEAVIGINPWCISVDTAQRYEHAFSKKHQTLFQLSSDLVDEV---WKDRPLANTQPVVHP 202
Query: 652 LHVRYTGRTAGEKIAELRRKMAEXKASALVLTGLXDIAYXLNLXG 786
V + G + K+ ELR+K+ KA +++ L ++A+ N+ G
Sbjct: 203 --VEFAGCSVTGKLKELRKKLLHEKARGIIIAALDEVAWLYNIRG 245
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/53 (49%), Positives = 35/53 (66%)
Frame = +1
Query: 169 LQALRALMSSQRPVLAAYITPTADAHNSEYIDAADARREWISAFTGSAGTAVV 327
L LRALM++ P L A + P+ DAH SEY+ D R ++IS FTG A +AV+
Sbjct: 11 LDELRALMAAHSPPLHALVVPSDDAHQSEYVAERDKRLQFISGFTGIARSAVL 63
>07_03_1329 + 25844335-25845000
Length = 221
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/82 (26%), Positives = 38/82 (46%)
Frame = +1
Query: 445 EKWLASNLKDGDVVGVDPQTMTRDEWTPIQTALKKISAQLVPISNNLVDDVRIELGDPAP 624
EK L+ +L+ + + +T + +K+ SA+L N++DD R + P P
Sbjct: 81 EKALSDDLEKVSLEAESARMITLESSDGEVVKVKEASARLSKTIGNIIDDGRGDEAIPLP 140
Query: 625 KRSHNELAPLHVRYTGRTAGEK 690
S+ L + V Y + A EK
Sbjct: 141 DVSYKTLKKV-VEYCDKHADEK 161
>10_08_0980 -
22002818-22003008,22003646-22003750,22003859-22003987,
22004076-22004268,22004270-22004473,22004931-22005071,
22005325-22005486,22005664-22005666
Length = 375
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +1
Query: 133 RKDRNREMSLQRLQALRALMSSQRPVLAAYITP--TADAHNSEYIDAADARREWISAFTG 306
RK R E+ L QA A+ +Q A I +A EY++AAD+++ +
Sbjct: 128 RKKRKEELRLHAAQARAAVSVAQLAAAIAGIRVGVRTEAGQPEYVEAADSKKMGTVLASA 187
Query: 307 SAGTAVVTSSQA 342
+A A V + A
Sbjct: 188 AALVATVCAEAA 199
>04_04_1310 -
32517074-32517193,32517295-32517360,32517468-32517558,
32517741-32517870,32517944-32518032,32518300-32518376,
32518539-32518607,32518800-32518874,32519040-32519135,
32519232-32519396
Length = 325
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 208 VLAAYITPTADAHNSEYIDAADARREWISAFTGSAGTA 321
++AA + PTA+ HN + AA R+W ++ +A
Sbjct: 3 IVAALVAPTANPHNPLRLIAAAPHRQWRRVAAAASSSA 40
>06_03_1041 -
27086661-27086981,27087089-27087295,27087398-27087675,
27088360-27088471
Length = 305
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 382 REVDLSAWTLMKQT-LPDTPTLEKWLASNLKDGDV 483
+ D +W T LPD ++WL+ NLKD V
Sbjct: 265 KTADAESWRKSGATVLPDLVAAQEWLSKNLKDEPV 299
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,708,780
Number of Sequences: 37544
Number of extensions: 481923
Number of successful extensions: 1334
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1327
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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