BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_P10
(830 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118590-1|AAM49959.1| 1858|Drosophila melanogaster LD45234p pro... 30 3.4
AE014296-469|AAF47657.3| 2145|Drosophila melanogaster CG16757-PA... 30 3.4
BT029039-1|ABJ16972.1| 1718|Drosophila melanogaster IP03621p pro... 29 7.8
AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ... 29 7.8
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA... 29 7.8
AE014134-1571|AAF52717.1| 1857|Drosophila melanogaster CG9487-PA... 29 7.8
>AY118590-1|AAM49959.1| 1858|Drosophila melanogaster LD45234p protein.
Length = 1858
Score = 30.3 bits (65), Expect = 3.4
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 530 QATLPWRSRLHQPDHQIPEFHTPTTPDLTSISINPLTP 643
Q +PW+ + HQ Q P HT P TS+S +P
Sbjct: 1692 QPKVPWQQQHHQQIQQQPSAHTTGPPSPTSMSSGCSSP 1729
>AE014296-469|AAF47657.3| 2145|Drosophila melanogaster CG16757-PA
protein.
Length = 2145
Score = 30.3 bits (65), Expect = 3.4
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 530 QATLPWRSRLHQPDHQIPEFHTPTTPDLTSISINPLTP 643
Q +PW+ + HQ Q P HT P TS+S +P
Sbjct: 1979 QPKVPWQQQHHQQIQQQPSAHTTGPPSPTSMSSGCSSP 2016
>BT029039-1|ABJ16972.1| 1718|Drosophila melanogaster IP03621p protein.
Length = 1718
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 484 PFILSHYYWRSRPYASSHPPLAISATSTRSSN 579
P + SH Y Y+SS P IS TS SS+
Sbjct: 1140 PMLRSHSYQEEGSYSSSRRPSTISTTSITSSD 1171
>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
initiation factoreIF4G protein.
Length = 1666
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +1
Query: 232 SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 357
S TF F PVL+ Y N+ Q C T + L+H PR
Sbjct: 1572 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1612
>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
protein.
Length = 1345
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +1
Query: 232 SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 357
S TF F PVL+ Y N+ Q C T + L+H PR
Sbjct: 1251 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1291
>AE014134-1571|AAF52717.1| 1857|Drosophila melanogaster CG9487-PA
protein.
Length = 1857
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 484 PFILSHYYWRSRPYASSHPPLAISATSTRSSN 579
P + SH Y Y+SS P IS TS SS+
Sbjct: 979 PMLRSHSYQEEGSYSSSRRPSTISTTSITSSD 1010
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,143,162
Number of Sequences: 53049
Number of extensions: 725769
Number of successful extensions: 2101
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2101
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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