Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_P10
(830 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak k... 31 1.3
U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak k... 31 1.3
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical... 29 3.1
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein. 29 3.1
L23648-5|AAN63385.1| 381|Caenorhabditis elegans Cyclin t protei... 29 5.4
L23648-4|AAA28033.2| 555|Caenorhabditis elegans Cyclin t protei... 29 5.4
AL117206-4|CAB60447.1| 447|Caenorhabditis elegans Hypothetical ... 29 5.4
U42841-14|AAC48172.3| 469|Caenorhabditis elegans Hypothetical p... 28 9.4
>U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform b protein.
Length = 422
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 223 GTVSSTFDHPFSTPVLRSYWHRNQ 294
G +++ F H S+P LR +WHR Q
Sbjct: 306 GHLNNGFHHTTSSPQLRGFWHRKQ 329
>U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform a protein.
Length = 516
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 223 GTVSSTFDHPFSTPVLRSYWHRNQ 294
G +++ F H S+P LR +WHR Q
Sbjct: 400 GHLNNGFHHTTSSPQLRGFWHRKQ 423
>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical protein
K04G2.8b protein.
Length = 1188
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +1
Query: 226 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 390
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 807 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 866
Query: 391 SFRP*PQNTSHS 426
P P+ SHS
Sbjct: 867 YLEPEPERRSHS 878
>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical protein
K04G2.8a protein.
Length = 1186
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +1
Query: 226 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 390
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 391 SFRP*PQNTSHS 426
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
>AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical
protein Y73F8A.16 protein.
Length = 396
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD 358
F L F++TG E KS V + S+ +I GYR+
Sbjct: 37 FPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRN 71
>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
Length = 1186
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +1
Query: 226 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 390
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 391 SFRP*PQNTSHS 426
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
>L23648-5|AAN63385.1| 381|Caenorhabditis elegans Cyclin t protein
1.2, isoform b protein.
Length = 381
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 517 RPYASSHPPLAISATSTRSSNPRIPYTNHPRLNIHFHQSP 636
RP +SSHP S +S+ S+N + L+ H HQ P
Sbjct: 195 RPSSSSHPLHHHSTSSSASNNSNHQNRSSSGLSAHQHQKP 234
>L23648-4|AAA28033.2| 555|Caenorhabditis elegans Cyclin t protein
1.2, isoform a protein.
Length = 555
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 517 RPYASSHPPLAISATSTRSSNPRIPYTNHPRLNIHFHQSP 636
RP +SSHP S +S+ S+N + L+ H HQ P
Sbjct: 369 RPSSSSHPLHHHSTSSSASNNSNHQNRSSSGLSAHQHQKP 408
>AL117206-4|CAB60447.1| 447|Caenorhabditis elegans Hypothetical
protein Y67A10A.6 protein.
Length = 447
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -3
Query: 738 FSHAPVTRG*DTADGAFDDNGGFNPGANSX*YGVRGLMEMDVKSGV 601
F HA ++RG ++ A +GG G+NS YG+ M K+GV
Sbjct: 194 FPHADLSRGYASSSTAMVRHGGSGSGSNS--YGIGTPMHFMSKTGV 237
>U42841-14|AAC48172.3| 469|Caenorhabditis elegans Hypothetical
protein T17H7.7 protein.
Length = 469
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = +2
Query: 572 HQIPEFHTPTTPDLTSISINPLTPYXKEFAP 664
H +P H P P + +++ P P F P
Sbjct: 70 HPLPPLHIPANPAIQELNLPPAPPLFNPFIP 100
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,383,236
Number of Sequences: 27780
Number of extensions: 343089
Number of successful extensions: 1032
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -