Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_P05
         (822 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49967-7|CAA90257.1|  740|Caenorhabditis elegans Hypothetical pr...    46   3e-05
Z50872-7|CAJ55249.1| 1001|Caenorhabditis elegans Hypothetical pr...    30   2.3  
Z50872-6|CAH10768.1| 1039|Caenorhabditis elegans Hypothetical pr...    30   2.3  
Z82067-2|CAB63319.1|  167|Caenorhabditis elegans Hypothetical pr...    29   4.0  
U13072-3|AAK31396.4|  326|Caenorhabditis elegans Serpentine rece...    29   4.0  
U41034-2|AAA82379.1|  915|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    28   9.3  

>Z49967-7|CAA90257.1|  740|Caenorhabditis elegans Hypothetical
           protein F54C9.9 protein.
          Length = 740

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 32/101 (31%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
 Frame = +3

Query: 99  KQKLFDEDSADE----VTFKTENEYAKKYDSWREKEELHKLEQKYGDKVLXXXXXXXXXX 266
           K  LF ED A+E      ++    YA+KYD+WR  EE+ K++ KYGD             
Sbjct: 6   KVSLFGEDDAEEQQNGAGWEINKGYAQKYDNWRRLEEMQKIKDKYGD---------IDDD 56

Query: 267 XXXXXXXXXXXXXMERQFLKTLALLKTKDPRIYNPSFKFFE 389
                         E  FLKTL  LK+ D   +     FF+
Sbjct: 57  DSSSESEPEWTEGHEEAFLKTLGALKSGDSSCFENGKGFFK 97


>Z50872-7|CAJ55249.1| 1001|Caenorhabditis elegans Hypothetical
           protein C05D12.3c protein.
          Length = 1001

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +1

Query: 100 SRSCLMKIQRMRSHLKLKMNTQRSTIRGVRRKNYINWNKNMET 228
           S+  ++ +  M+S +  ++ T RS  +G+      NWNKN E+
Sbjct: 89  SKRSIIIVFNMKSSMAEQLETLRSNFKGMVNSITQNWNKNKES 131


>Z50872-6|CAH10768.1| 1039|Caenorhabditis elegans Hypothetical
           protein C05D12.3a protein.
          Length = 1039

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +1

Query: 100 SRSCLMKIQRMRSHLKLKMNTQRSTIRGVRRKNYINWNKNMET 228
           S+  ++ +  M+S +  ++ T RS  +G+      NWNKN E+
Sbjct: 89  SKRSIIIVFNMKSSMAEQLETLRSNFKGMVNSITQNWNKNKES 131


>Z82067-2|CAB63319.1|  167|Caenorhabditis elegans Hypothetical
           protein W03H9.2 protein.
          Length = 167

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = +3

Query: 114 DEDSADEVTFK---TENEYAKKYDSWREKEELHKLE 212
           +E   +E+TF     +    KKY  WR+K+E  KLE
Sbjct: 116 EERRQNEITFDKWVAKKSTLKKYGKWRKKQEAKKLE 151


>U13072-3|AAK31396.4|  326|Caenorhabditis elegans Serpentine
           receptor, class e (epsilon)protein 3 protein.
          Length = 326

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -3

Query: 151 SVLNVTSSAESSSNNFCFSITIISMNATLIYF 56
           S+ N+ S+  +S +NF FS T +++ ATL  F
Sbjct: 227 SIFNLLSTVSASLDNFNFSQTFLNVAATLFNF 258


>U41034-2|AAA82379.1|  915|Caenorhabditis elegans Hypothetical
           protein M02D8.3 protein.
          Length = 915

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +3

Query: 108 LFDEDSADEVTFKTENEYAKKYDSWREKEELHK-LEQKYGDKVL 236
           L D D  ++   KT+ E  K+ +  R+KEE +K  E+K  +K+L
Sbjct: 371 LVDSDGEEDKEKKTKMEMEKEKEKTRKKEENNKRKEKKEAEKLL 414


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +3

Query: 105 KLFDEDSADEVTFKTENEYAKKYDSWREKEE-LHKLEQKYGD 227
           K+ ++D ++ ++F  + EY    D WRE  E + ++ QKYG+
Sbjct: 240 KMSEQDPSNHISFCRDFEYTFVSD-WRESSERVVEILQKYGE 280


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,796,747
Number of Sequences: 27780
Number of extensions: 232061
Number of successful extensions: 746
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)