Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_P04
         (818 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0448 - 3332238-3332330,3332414-3332481,3332570-3332618,333...    32   0.48 
07_01_0373 + 2783596-2784933                                           31   0.83 
08_02_0875 + 22103903-22106293                                         30   2.5  
02_05_0158 - 26362259-26362695,26363732-26363903                       29   4.4  
02_01_0219 - 1437685-1437723,1437932-1438091,1438385-1438514,143...    29   4.4  
01_05_0227 - 19512866-19514983                                         29   4.4  
04_01_0041 - 464695-464850,467485-469029                               29   5.9  

>01_01_0448 -
           3332238-3332330,3332414-3332481,3332570-3332618,
           3332716-3332798,3332900-3333023,3333389-3333486,
           3333555-3333634,3333712-3333782,3333872-3333953,
           3334158-3334237,3334365-3334416,3334843-3334958
          Length = 331

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = +3

Query: 543 LAISATSTRSSNPRFHTPTTP 605
           +A S+T+TR S PR H PTTP
Sbjct: 1   MAASSTATRLSPPRLHAPTTP 21


>07_01_0373 + 2783596-2784933
          Length = 445

 Score = 31.5 bits (68), Expect = 0.83
 Identities = 12/28 (42%), Positives = 21/28 (75%)
 Frame = -1

Query: 92  EEEKALTKEGMAEAAETXKGTISSMNRS 9
           E+++ LTK G +  +ET KG++ S++RS
Sbjct: 151 EQQQQLTKSGCSSTSETSKGSVLSLSRS 178


>08_02_0875 + 22103903-22106293
          Length = 796

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +3

Query: 534 HPPLAISATSTRSSNPRFHTPTTPDLTSISINPLNAVLKGV-RAGVKASG 680
           HP   ++A S R  NP+      PDL +  +N L A   GV  AG+ + G
Sbjct: 505 HPAPVVAAFSARGPNPQSPEILKPDLIAPGLNILAAWPSGVGPAGIPSDG 554


>02_05_0158 - 26362259-26362695,26363732-26363903
          Length = 202

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +3

Query: 519 PYASSHPPLAISATSTRSSNPRFHTP-TTPDLTSISINPLNAVLKGVRAGVKASG 680
           P ASS PP + +  +T SS+P   TP +TPD T+    P     K   +   ASG
Sbjct: 132 PTASSSPP-STATPATPSSDPGMDTPSSTPDATT---TPTTTTTKSTGSTGGASG 182


>02_01_0219 -
           1437685-1437723,1437932-1438091,1438385-1438514,
           1438627-1438696,1439264-1439407,1439771-1439837,
           1439970-1440019,1440386-1440559,1440881-1440934,
           1441008-1441112
          Length = 330

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
 Frame = +1

Query: 283 TETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPXL--KIPVTVDLCWTTADVT 456
           TE  +N V V  L   SS   GY D  + ++   V      +  K+ V +D    TAD++
Sbjct: 167 TEAGANRVLVCDLH--SSQAMGYFDIPVDHVYGQVMNLIGDVRGKVAVMMDDMIDTADIS 224

Query: 457 VEGVNVLATPSSSRITIGGLALMHQ 531
           +  +N+L  P        G  L+HQ
Sbjct: 225 LPNINILMKPIKLGTIAKGAELLHQ 249


>01_05_0227 - 19512866-19514983
          Length = 705

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -1

Query: 461 STVTSAVVQQRSTVTGILXLGAEGKTTASRL 369
           S +T + +QQ   +  ++ LG  GKTT ++L
Sbjct: 18  SKLTESSIQQNIKIVSVIGLGGSGKTTLAKL 48


>04_01_0041 - 464695-464850,467485-469029
          Length = 566

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +1

Query: 244 IIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPS-APXLKIPV 420
           +I   R + D++ T  +SN + V +LP VSS  + Y D ++   +    P   P  ++ V
Sbjct: 40  LISVFRPFTDVSLTLCRSNYIGVTNLPIVSSECEAYYDDFVSGADFTARPQVVPPWRLAV 99

Query: 421 TVD 429
            +D
Sbjct: 100 PLD 102


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,166,257
Number of Sequences: 37544
Number of extensions: 468698
Number of successful extensions: 1205
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)