Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_O08
         (800 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342...   125   4e-29
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327...   124   8e-29
02_05_0686 - 30900748-30902167,30903442-30904742                       33   0.20 
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753...    31   1.1  
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647     30   2.5  
07_01_0893 + 7484598-7484744,7484837-7484902,7494387-7494530,749...    29   4.3  
03_05_0576 + 25765137-25766420                                         28   7.5  

>12_01_0435 +
           3428552-3428636,3429242-3429352,3429434-3429738,
           3429821-3430230,3430323-3430556,3430934-3431378,
           3432300-3432390,3433292-3433518,3433786-3433861,
           3434009-3434134,3434221-3434384
          Length = 757

 Score =  125 bits (302), Expect = 4e-29
 Identities = 54/78 (69%), Positives = 64/78 (82%)
 Frame = +3

Query: 36  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMXHVVREP 215
           MSHRKF  PRHGS+GF P+KRS RHRGKVK+FPKDD SKP HLT+F+GYKAGM H+VRE 
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREV 60

Query: 216 DRPGSKXNKKXIVEXVXL 269
           ++PGSK +KK   E V +
Sbjct: 61  EKPGSKLHKKETCEAVTI 78


>11_01_0427 +
           3274817-3274901,3275587-3275697,3275979-3276283,
           3276406-3276815,3276942-3277200
          Length = 389

 Score =  124 bits (299), Expect = 8e-29
 Identities = 53/78 (67%), Positives = 64/78 (82%)
 Frame = +3

Query: 36  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMXHVVREP 215
           MSHRKF  PRHGS+GF P+KRS RHRGKVK+FPKDD +KP HLT+F+GYKAGM H+VRE 
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVNKPCHLTSFVGYKAGMTHIVREV 60

Query: 216 DRPGSKXNKKXIVEXVXL 269
           ++PGSK +KK   E V +
Sbjct: 61  EKPGSKLHKKETCEAVTI 78


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 33.5 bits (73), Expect = 0.20
 Identities = 15/39 (38%), Positives = 16/39 (41%)
 Frame = +3

Query: 417 KGXPXXPXKRGGGXGPPXXKKXXXXXPPXXGXKXXPPPP 533
           KG P  P  +G    PP         PP  G K  PPPP
Sbjct: 342 KGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPP 380


>07_03_0481 -
           18572206-18574314,18574591-18575185,18575304-18575371,
           18577344-18577458,18578179-18578333,18578673-18580621,
           18580691-18581372,18581550-18581621,18582558-18583199,
           18583301-18583402,18585011-18585100
          Length = 2192

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +3

Query: 15  SLRLSSSMSHRKFSAPRHGSM-GFYPKKRSRRHRGKVKAFPKDDPSKPVHLT 167
           S+  S+S+ H +   P+  S+ G  P   +++ + KVK   K  P   VH+T
Sbjct: 233 SMEPSTSLEHSESPPPKRKSLDGRTPASSTKKGKKKVKFVDKKHPENAVHIT 284


>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
          Length = 252

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 17/55 (30%), Positives = 17/55 (30%)
 Frame = +3

Query: 369 KKXXXPXXKXGXXXQKKGXPXXPXKRGGGXGPPXXKKXXXXXPPXXGXKXXPPPP 533
           K    P  K      K G    P K G    PP         PP  G K  P PP
Sbjct: 158 KPGPKPKPKPSPPKPKPGPKPKPPKPGPKPKPPKPGPKPKPKPPKPGPKPKPKPP 212


>07_01_0893 +
           7484598-7484744,7484837-7484902,7494387-7494530,
           7494860-7495235,7495904-7496017,7496282-7496454,
           7496562-7496669,7497311-7497377,7497791-7497904,
           7498121-7498257,7498727-7498813,7498962-7498986,
           7499044-7499266,7499770-7499947,7500039-7500152,
           7500249-7500380,7500488-7500588,7500720-7500933
          Length = 839

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +1

Query: 292 FRFFGYXEXPLGKPPLFNFWGGXXFLKKXXXPXXKXGXXXKK 417
           F+ FG+   P+G PP  + W G    +       K G   K+
Sbjct: 77  FKDFGFRNIPIGPPPRISVWKGGMIKEYSKMDECKTGDFGKR 118


>03_05_0576 + 25765137-25766420
          Length = 427

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 12/31 (38%), Positives = 12/31 (38%)
 Frame = +3

Query: 441 KRGGGXGPPXXKKXXXXXPPXXGXKXXPPPP 533
           KRGG   PP         PP       PPPP
Sbjct: 61  KRGGPEAPPSPSPSPSPSPPPQPSSPPPPPP 91


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,629,011
Number of Sequences: 37544
Number of extensions: 339941
Number of successful extensions: 494
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 465
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)