Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_O04
         (821 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0373 + 2783596-2784933                                           31   0.84 
12_02_0299 - 17051570-17052474,17053542-17053755                       31   1.1  
08_01_0083 - 604175-605776                                             30   2.6  
02_05_0686 - 30900748-30902167,30903442-30904742                       30   2.6  
10_08_0931 - 21647562-21649037                                         29   3.4  

>07_01_0373 + 2783596-2784933
          Length = 445

 Score = 31.5 bits (68), Expect = 0.84
 Identities = 12/28 (42%), Positives = 21/28 (75%)
 Frame = -1

Query: 92  EEEKALTKEGMAEAAETXKGTISSMNRS 9
           E+++ LTK G +  +ET KG++ S++RS
Sbjct: 151 EQQQQLTKSGCSSTSETSKGSVLSLSRS 178


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 22/80 (27%), Positives = 27/80 (33%), Gaps = 3/80 (3%)
 Frame = +2

Query: 533 PXLPWEXRLNXPDHQIPDFLNPT---PPKLXSLFXXSPEXRXXKEFPPRG*NPXFFXKGP 703
           P  PW      P   +P   +P    PP   +     P+      FPP    P F+   P
Sbjct: 265 PPWPWAPPPAFPFPHLPPIFSPPSPPPPPPPAFPFPFPQLPPLPHFPPL---PSFYPSPP 321

Query: 704 XXXFPPPPXXGWVKXGXPPL 763
               PPPP         PPL
Sbjct: 322 PPPPPPPPPPPSFPWPFPPL 341


>08_01_0083 - 604175-605776
          Length = 533

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 17/44 (38%), Positives = 20/44 (45%)
 Frame = +2

Query: 476 LXXPSSSRIILGGSPXCIKPXLPWEXRLNXPDHQIPDFLNPTPP 607
           L  PSSS    G +P C     PW+ RL   D+     L P PP
Sbjct: 23  LVRPSSSLSSSGHAPPCDIHLTPWDLRLLSIDYIQKGVLLPKPP 66


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
 Frame = +2

Query: 596 PTPPKLXSLFXXSPEXRXXKEFPP-RG*NPXFFXKGPXXXFPPPPXXGWVKXGXPP 760
           P PP         P  +     PP +G  P    KGP    PPPP  G  K G PP
Sbjct: 326 PPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSP--PPPPPPGGKKGGPPP 379


>10_08_0931 - 21647562-21649037
          Length = 491

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
 Frame = +2

Query: 509 GGSPXCIKPXLPWEXRLNXPDHQIPDFLNPTPPKLXSLFXXSPE--XRXXKEFPPRG*NP 682
           GG    +   +PW  R    D   P   +P+P +L      S E   +  +++  R  +P
Sbjct: 208 GGHETVLPSPIPWRSRSGRFDASAPSPPSPSPKRLSPASSLSKETLAKASEDYSSRRRSP 267

Query: 683 XFFXKGPXXXFPPPP 727
             +   P    PPPP
Sbjct: 268 --YKSSPPAPPPPPP 280


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,540,038
Number of Sequences: 37544
Number of extensions: 381515
Number of successful extensions: 682
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)