Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_O02
(829 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0582 - 4318837-4318967,4319219-4319399,4319504-4319701,431... 220 1e-57
07_03_1272 - 25360180-25360286,25360454-25360658,25360748-253609... 217 1e-56
07_03_1136 + 24218601-24218734,24218769-24219906 31 1.1
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 29 3.4
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 29 3.4
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 3.4
11_06_0458 + 23808402-23808469,23808800-23809684,23810011-238119... 29 6.0
09_06_0103 + 20873310-20873382,20873530-20873735 29 6.0
03_02_0792 + 11236785-11237337,11237711-11238261,11238446-112386... 29 6.0
07_01_0080 + 587674-588510 28 7.9
01_06_0902 + 32853708-32853739,32854787-32855596,32856094-328561... 28 7.9
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 28 7.9
>03_01_0582 -
4318837-4318967,4319219-4319399,4319504-4319701,
4319791-4320053,4320453-4320597
Length = 305
Score = 220 bits (537), Expect = 1e-57
Identities = 102/166 (61%), Positives = 125/166 (75%)
Frame = +1
Query: 52 ISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWE 231
++A G L+ E+DV MLAA HLG +N +FQME YVYKRR+DG ++INL +TWE
Sbjct: 1 MAAVAGGAARALSQAEQDVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIYIINLGKTWE 60
Query: 232 KLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAF 411
KL LAAR +VAIENP D+ V S+RP+GQRAVLKFA +TGA IAGR TPG FTNQ+Q +F
Sbjct: 61 KLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF 120
Query: 412 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLXFVDIAFP 549
EPRLLI+ DP DHQPI E++ NIP IA C+TDSP+ +VDI P
Sbjct: 121 SEPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIP 166
>07_03_1272 -
25360180-25360286,25360454-25360658,25360748-25360945,
25361034-25361296,25361865-25362009
Length = 305
Score = 217 bits (529), Expect = 1e-56
Identities = 99/155 (63%), Positives = 120/155 (77%)
Frame = +1
Query: 85 LALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVA 264
L+ E+D+ MLAA HLG +N +FQME YVYKRR DG ++INL +TWEKL LAAR +VA
Sbjct: 12 LSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVIVA 71
Query: 265 IENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDP 444
IENP D+ V S+RP+GQRAVLKFA +TGA IAGR TPG FTNQ+Q +F EPRLLI+ DP
Sbjct: 72 IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDP 131
Query: 445 AQDHQPITEASYVNIPVIALCNTDSPLXFVDIAFP 549
DHQPI E++ NIP IA C+TDSP+ +VDI P
Sbjct: 132 RTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIP 166
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 588 GVXGXLXXXGXRGGXPPXPPXGXXGGXXXXPPXPPXXXXXGXXXXXXXXGG 740
G G G GG PP P G GG PP P G GG
Sbjct: 102 GGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGG 152
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +2
Query: 623 GXXPPGXPPGXXXGXXXXPPXPPXXXXXGGXXXPXXXGGG 742
G PP PPG G PP P G GGG
Sbjct: 114 GGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGG 153
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 624 GGXPPXPPXGXXGGXXXXPPXP 689
G PP PP G GG PP P
Sbjct: 622 GAPPPPPPPGKPGGPPPPPPRP 643
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 624 GGXPPXPPXGXXGGXXXXPPXP 689
G PP PP G GG PP P
Sbjct: 927 GAPPPPPPPGKPGGPPPPPPPP 948
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 624 GGXPPXPPXGXXGGXXXXPP 683
GG PP PP G GG PP
Sbjct: 1146 GGVPPPPPVGGLGGPPAPPP 1165
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +2
Query: 623 GXXPPGXPPGXXXGXXXXPPXPPXXXXXGGXXXPXXXGG-GXP 748
G PP PP G PP PP GG P GG G P
Sbjct: 1120 GVPPP--PPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGP 1160
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 6/48 (12%)
Frame = -2
Query: 747 GXPPPXXXG--XXXPPXXXXXGGXGGXXXXP----XXXPGGXPGGXXP 622
G PPP G PP GG GG P P G PGG P
Sbjct: 1172 GTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPP 1219
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -1
Query: 739 PPXXXXXXXXPXXXXXGGXGGXXXXPPXXPXGGSGGXPP 623
PP P GG GG PP P G GG PP
Sbjct: 1139 PPLPEGIGGVPPPPPVGGLGGPPAPPP--PAGFRGGTPP 1175
>11_06_0458 + 23808402-23808469,23808800-23809684,23810011-23811961,
23812210-23812285,23813064-23813072,23813243-23813335,
23813578-23813581,23813780-23814703,23814926-23815909,
23816073-23816118,23816376-23816951,23817253-23817798,
23817820-23818416
Length = 2252
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 152 TFSAPRWVVAASILVTSSSLRASTSNP 72
TF A RWV+AA V + L AS S+P
Sbjct: 2100 TFHAHRWVLAARSPVLKAKLSASPSSP 2126
>09_06_0103 + 20873310-20873382,20873530-20873735
Length = 92
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +3
Query: 330 VCRAHRCYAYC---GTFHTRCFY*PDPSCIP*TSSLDCI 437
+CR+ RC YC G RC + DPS ++ +C+
Sbjct: 45 LCRSTRCNQYCVSEGATRGRCGFSSDPSATALKNATECL 83
>03_02_0792 +
11236785-11237337,11237711-11238261,11238446-11238628,
11238768-11238966,11239055-11239761
Length = 730
Score = 28.7 bits (61), Expect = 6.0
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = +1
Query: 340 HTGATPIAGRFTPGAFTNQIQAAFREPRLLI--VLDPAQDHQPITEASYVNIPVIALCNT 513
HT +T R TP AF + AA E R+ + + ++ EA Y +I V + +
Sbjct: 270 HTLSTGETVRVTPAAFDSVTPAAIDETRVAVAAIRQKSEFSDVRVEAQYRHIEVFDMRSP 329
Query: 514 DSPLXFVDIAFPCXTXFXP 570
+ P+ P F P
Sbjct: 330 EQPMQITRNTRPKADHFNP 348
>07_01_0080 + 587674-588510
Length = 278
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -1
Query: 691 GGXGGXXXXPPXXPXGGSGGXPPRXPXXFKXPXTPXXNPM 572
GG G PP P S G PP P P P P+
Sbjct: 83 GGDGMFRRPPPPPPPPPSSGSPPPPPPPPPPPPPPPPPPL 122
>01_06_0902 +
32853708-32853739,32854787-32855596,32856094-32856157,
32856375-32856446
Length = 325
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +3
Query: 159 PDGDLCLQTTC*WYPCDQLASYLGKTCSGCSCCRSH 266
P +C+ T C C K CS CSC + H
Sbjct: 265 PQNSVCMVTLCTSEICSGRRYAAKKLCSACSCHKRH 300
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 28.3 bits (60), Expect = 7.9
Identities = 22/78 (28%), Positives = 27/78 (34%)
Frame = +3
Query: 105 CHQNACCNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASYLGKTCSGCSCCRSHREPR*C 284
CH C P GR+ P G + CD A+ G TC C H+ P C
Sbjct: 324 CHAGKCGGCPLQGRRT-CPCGKKDYPSL----DCDAEAATCGSTCEKVLGCGRHKCPERC 378
Query: 285 VRHLLTALRSACCTEVCR 338
R T+ CR
Sbjct: 379 HRGSCVETCRLVITKSCR 396
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,532,195
Number of Sequences: 37544
Number of extensions: 554751
Number of successful extensions: 1629
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1492
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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