Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_O02
(829 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 235 4e-62
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 36 0.035
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 36 0.047
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 36 0.047
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 36 0.047
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 36 0.047
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 35 0.062
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 34 0.11
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 34 0.11
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.76
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.76
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.76
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 31 1.3
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 31 1.3
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 31 1.3
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 31 1.3
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 30 1.8
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 30 1.8
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 30 1.8
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 5.4
U64852-3|ABH03525.1| 740|Caenorhabditis elegans Uncoordinated p... 29 5.4
U64852-2|ABH03524.1| 975|Caenorhabditis elegans Uncoordinated p... 29 5.4
U64852-1|AAB04966.2| 1041|Caenorhabditis elegans Uncoordinated p... 29 5.4
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 5.4
AF338767-1|AAL15621.1| 1041|Caenorhabditis elegans UNC-83 protein. 29 5.4
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 28 9.4
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 28 9.4
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 28 9.4
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 235 bits (574), Expect = 4e-62
Identities = 105/163 (64%), Positives = 130/163 (79%)
Frame = +1
Query: 64 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVL 243
MSGG AL EEDV K+LA HLG+ N+NFQM+ YVYKRR DG ++IN+++TWEKL+L
Sbjct: 1 MSGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLL 60
Query: 244 AARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 423
AARA+ A+ENPADV V+S+RP+ QRA+LKFAAHTGAT I GRF+PG TNQIQ F+EPR
Sbjct: 61 AARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPR 120
Query: 424 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLXFVDIAFPC 552
LL++ DP DHQ +TEASYV +PVI+ NT+SPL +DI PC
Sbjct: 121 LLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPC 163
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 35.9 bits (79), Expect = 0.035
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +3
Query: 243 GCSCCRSHREPR*CVRHLLTALRSACCTEVCRAHR-CYAYCG 365
GC CC + C R T R+ CCT C R C CG
Sbjct: 82 GCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 35.5 bits (78), Expect = 0.047
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +3
Query: 243 GCSCCRSHREPR*CVRHLLTALRSACCTEVCRAHR-CYAYCG 365
GC CC C R T R+ CCT C R C CG
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 35.5 bits (78), Expect = 0.047
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +3
Query: 243 GCSCCRSHREPR*CVRHLLTALRSACCTEVCRAHR-CYAYCG 365
GC CC C R T R+ CCT C R C CG
Sbjct: 81 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 122
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 35.5 bits (78), Expect = 0.047
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +3
Query: 243 GCSCCRSHREPR*CVRHLLTALRSACCTEVCRAHR-CYAYCG 365
GC CC C R T R+ CCT C R C CG
Sbjct: 82 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 35.5 bits (78), Expect = 0.047
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +3
Query: 243 GCSCCRSHREPR*CVRHLLTALRSACCTEVCRAHR-CYAYCG 365
GC CC C R T R+ CCT C R C CG
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 35.1 bits (77), Expect = 0.062
Identities = 21/73 (28%), Positives = 30/73 (41%)
Frame = +3
Query: 240 SGCSCCRSHREPR*CVRHLLTALRSACCTEVCRAHRCYAYCGTFHTRCFY*PDPSCIP*T 419
S SCC S C+ + +S+C T +C+ +C C T PSC
Sbjct: 38 SSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQ-QQCSNQCNQQCTSITISSGPSCSSCQ 96
Query: 420 SSLDCIGPCTRPS 458
S+ C CT P+
Sbjct: 97 SA--CSSACTTPT 107
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = -1
Query: 691 GGXGGXXXXPPXXPXGGSGGXPPRXPXXFKXPXTPXXNP 575
GG GG PP P GG GG P P K P P P
Sbjct: 619 GGPGGGGG-PPRGPGGGGGGGPTGPPAPPKPPAKPRGRP 656
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 624 GGXPPXPPXGXXGGXXXXPPXPP 692
GG PP P G GG PP PP
Sbjct: 624 GGGPPRGPGGGGGGGPTGPPAPP 646
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = -1
Query: 691 GGXGGXXXXPPXXPXGGSGGXPPRXPXXFKXPXTPXXNP 575
GG GG PP P GG GG P P K P P P
Sbjct: 619 GGPGGGGG-PPRGPGGGGGGGPTGPPAPPKPPAKPRGRP 656
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 624 GGXPPXPPXGXXGGXXXXPPXPP 692
GG PP P G GG PP PP
Sbjct: 624 GGGPPRGPGGGGGGGPTGPPAPP 646
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 0.76
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 624 GGXPPXPPXGXXGGXXXXPPXPP 692
GG PP PP GG PP PP
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPP 788
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +2
Query: 623 GXXPPGXPPGXXXGXXXXPPXPPXXXXXGGXXXPXXXG 736
G PP PPG G PP PP GG P G
Sbjct: 757 GPPPPPPPPG---GCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = -1
Query: 682 GGXXXXPPXXPXGG-SGGXPPRXPXXFKXPXTP 587
GG PP P GG GG PP P P P
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 624 GGXPPXPPXGXXGGXXXXPPXPP 692
GG PP PP G PP PP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPP 746
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 624 GGXPPXPPXGXXGGXXXXPPXPP 692
GG PP PP G PP PP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPP 762
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 628 GSPRXPPXXXXGXXXXPPXXPPXXXXGGXXXP 723
G P PP G PP PP GG P
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = -2
Query: 747 GXPPPXXXGXXXPPXXXXXGGXGGXXXXPXXXPGGXPGGXXPGXXXXLRXXXPP 586
G PP G PP G P PGG P P + PP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 0.76
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 624 GGXPPXPPXGXXGGXXXXPPXPP 692
GG PP PP GG PP PP
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPP 788
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +2
Query: 623 GXXPPGXPPGXXXGXXXXPPXPPXXXXXGGXXXPXXXG 736
G PP PPG G PP PP GG P G
Sbjct: 757 GPPPPPPPPG---GCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = -1
Query: 682 GGXXXXPPXXPXGG-SGGXPPRXPXXFKXPXTP 587
GG PP P GG GG PP P P P
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 624 GGXPPXPPXGXXGGXXXXPPXPP 692
GG PP PP G PP PP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPP 746
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 624 GGXPPXPPXGXXGGXXXXPPXPP 692
GG PP PP G PP PP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPP 762
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 628 GSPRXPPXXXXGXXXXPPXXPPXXXXGGXXXP 723
G P PP G PP PP GG P
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = -2
Query: 747 GXPPPXXXGXXXPPXXXXXGGXGGXXXXPXXXPGGXPGGXXPGXXXXLRXXXPP 586
G PP G PP G P PGG P P + PP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 0.76
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 624 GGXPPXPPXGXXGGXXXXPPXPP 692
GG PP PP GG PP PP
Sbjct: 349 GGCPPPPPPPPPGGFKGGPPPPP 371
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +2
Query: 623 GXXPPGXPPGXXXGXXXXPPXPPXXXXXGGXXXPXXXG 736
G PP PPG G PP PP GG P G
Sbjct: 340 GPPPPPPPPG---GCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = -1
Query: 682 GGXXXXPPXXPXGG-SGGXPPRXPXXFKXPXTP 587
GG PP P GG GG PP P P P
Sbjct: 349 GGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 624 GGXPPXPPXGXXGGXXXXPPXPP 692
GG PP PP G PP PP
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPP 329
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 624 GGXPPXPPXGXXGGXXXXPPXPP 692
GG PP PP G PP PP
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPP 345
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 628 GSPRXPPXXXXGXXXXPPXXPPXXXXGGXXXP 723
G P PP G PP PP GG P
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = -2
Query: 747 GXPPPXXXGXXXPPXXXXXGGXGGXXXXPXXXPGGXPGGXXPGXXXXLRXXXPP 586
G PP G PP G P PGG P P + PP
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 310 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 471
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3127 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 310 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 471
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 310 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 471
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3025 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 310 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 471
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3026 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 310 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 471
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3108 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 310 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 471
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3127 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 310 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 471
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 310 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 471
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3025 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 310 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 471
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3026 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 310 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 471
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3108 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 310 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 471
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 310 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 471
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 310 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 471
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 371 SHQVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 523
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3338 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3388
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 371 SHQVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 523
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 371 SHQVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 523
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 371 SHQVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 523
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +2
Query: 551 AXPXXPPHWVXXGGXXXLKXXXXPGXXPPGXPPGXXXGXXXXPPXPPXXXXXGGXXXPXX 730
A P PP GG L P P P G PP P GG P
Sbjct: 30 APPPPPPSPCGCGGGGGLALPQLP---PLSLPSLGGGGGCCPPPAPACGGGCGGGVAPAP 86
Query: 731 XGGG 742
GGG
Sbjct: 87 IGGG 90
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/59 (27%), Positives = 17/59 (28%)
Frame = -2
Query: 741 PPPXXXGXXXPPXXXXXGGXGGXXXXPXXXPGGXPGGXXPGXXXXLRXXXPPXXTQXGG 565
PPP G PP G G P P P P + PP GG
Sbjct: 288 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 346
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 624 GGXPPXPPXGXXGGXXXXPPXPPXXXXXG 710
GG PP PP G PP PP G
Sbjct: 331 GGMPPPPPPGMRYPGGMPPPPPPRYPSAG 359
>U64852-3|ABH03525.1| 740|Caenorhabditis elegans Uncoordinated
protein 83, isoform c protein.
Length = 740
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 287 SSSPHGPSVSVLY*SLPRTPVLRLLRDVSHQV 382
SS P G ++ S P TPV RLLR + Q+
Sbjct: 281 SSKPEGMMTPMIRVSPPSTPVRRLLRKLDEQI 312
>U64852-2|ABH03524.1| 975|Caenorhabditis elegans Uncoordinated
protein 83, isoform b protein.
Length = 975
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 287 SSSPHGPSVSVLY*SLPRTPVLRLLRDVSHQV 382
SS P G ++ S P TPV RLLR + Q+
Sbjct: 516 SSKPEGMMTPMIRVSPPSTPVRRLLRKLDEQI 547
>U64852-1|AAB04966.2| 1041|Caenorhabditis elegans Uncoordinated
protein 83, isoform a protein.
Length = 1041
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 287 SSSPHGPSVSVLY*SLPRTPVLRLLRDVSHQV 382
SS P G ++ S P TPV RLLR + Q+
Sbjct: 582 SSKPEGMMTPMIRVSPPSTPVRRLLRKLDEQI 613
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/59 (27%), Positives = 17/59 (28%)
Frame = -2
Query: 741 PPPXXXGXXXPPXXXXXGGXGGXXXXPXXXPGGXPGGXXPGXXXXLRXXXPPXXTQXGG 565
PPP G PP G G P P P P + PP GG
Sbjct: 298 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 356
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 624 GGXPPXPPXGXXGGXXXXPPXPPXXXXXG 710
GG PP PP G PP PP G
Sbjct: 341 GGMPPPPPPGMRYPGGMPPPPPPRYPSAG 369
>AF338767-1|AAL15621.1| 1041|Caenorhabditis elegans UNC-83 protein.
Length = 1041
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 287 SSSPHGPSVSVLY*SLPRTPVLRLLRDVSHQV 382
SS P G ++ S P TPV RLLR + Q+
Sbjct: 582 SSKPEGMMTPMIRVSPPSTPVRRLLRKLDEQI 613
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +3
Query: 123 CNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASYLGKTCSGCSC-CRSHREPR*CVRHLL 299
C GR+C TC PC++ S TC G SC C+++ E C R
Sbjct: 453 CKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDRCKA 512
Query: 300 TALRSACCTEV-CRAHRCYAYCGT 368
+ + + C+ C+ + T
Sbjct: 513 GTIHLSASNPLGCQPCFCFGHSST 536
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +3
Query: 123 CNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASYLGKTCSGCSC-CRSHREPR*CVRHLL 299
C GR+C TC PC++ S TC G SC C+++ E C R
Sbjct: 453 CKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDRCKA 512
Query: 300 TALRSACCTEV-CRAHRCYAYCGT 368
+ + + C+ C+ + T
Sbjct: 513 GTIHLSASNPLGCQPCFCFGHSST 536
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +3
Query: 123 CNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASYLGKTCSGCSC-CRSHREPR*CVRHLL 299
C GR+C TC PC++ S TC G SC C+++ E C R
Sbjct: 453 CKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDRCKA 512
Query: 300 TALRSACCTEV-CRAHRCYAYCGT 368
+ + + C+ C+ + T
Sbjct: 513 GTIHLSASNPLGCQPCFCFGHSST 536
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,046,000
Number of Sequences: 27780
Number of extensions: 431706
Number of successful extensions: 1436
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1301
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -