Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_N11
(850 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 55 1e-09
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 53 4e-09
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 51 1e-08
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 50 4e-08
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 50 4e-08
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 50 4e-08
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 49 5e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 49 5e-08
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 49 6e-08
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 48 8e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 48 8e-08
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 48 8e-08
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 47 2e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 47 2e-07
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 47 2e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 47 2e-07
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 47 3e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 46 3e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 46 4e-07
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 45 1e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 44 1e-06
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 44 2e-06
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 42 5e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 42 7e-06
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 35 8e-04
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 24 1.5
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 23 4.7
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 23 4.7
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 23 4.7
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 8.2
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 54.8 bits (126), Expect = 1e-09
Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 11/158 (6%)
Frame = +3
Query: 96 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 254
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 255 --VWILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLXNAGATTAGDYAL-R 422
VW L+ W D + W+ E+G T L V SE +W PD+VL N G + +
Sbjct: 69 TNVW----LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTK 124
Query: 423 ARVSNNGSGSWIKRLDISTPVSMQLGNWPKDMQTCTCK 536
A + G W + + + +P D QTC K
Sbjct: 125 AILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMK 162
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 52.8 bits (121), Expect = 4e-09
Identities = 40/161 (24%), Positives = 70/161 (43%), Gaps = 10/161 (6%)
Frame = +3
Query: 120 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVWILADLQMNW 287
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 288 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLXNAGAT---TAGDYALRARVSNNGSGSWI 458
+D+RL++ G+ + + R+W+PD N + T R+ +G +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 459 KRLDISTPVSMQLGNWPKDMQTCTCKVRXXDCT---IVXKW 572
RL I M L N+P D Q C + T ++ KW
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGSFGYTKRDVIYKW 162
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 51.2 bits (117), Expect = 1e-08
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 11/152 (7%)
Frame = +3
Query: 114 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESEST--VWIL 266
C + D LL+ Y++ P + LT+ ++ N++ T +W+
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLWV- 77
Query: 267 ADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL-XNAGATTAGDYALRARVSNN 440
+ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++
Sbjct: 78 ---EQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYT 134
Query: 441 GSGSWIKRLDISTPVSMQLGNWPKDMQTCTCK 536
G W + + + +P D QTC K
Sbjct: 135 GRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMK 166
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 49.6 bits (113), Expect = 4e-08
Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 7/140 (5%)
Frame = +3
Query: 141 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVWILAD---LQMNWIDKRLS 305
+ D LL+ Y++ P ++ V+ + + L+ + + + I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 306 WNAGEWGCSTWL-VSSERLWRPDVVL-XNAGATTAGDYALRARVSNNGSGSWIKRLDIST 479
W E+G L V S+ +WRPD+VL NA +A V +G W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNYEVTLMTKATVYYSGLVVWQPPAVYKS 151
Query: 480 PVSMQLGNWPKDMQTCTCKV 539
S+ + +P D+QTC K+
Sbjct: 152 SCSIDVEFFPYDVQTCVLKL 171
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 49.6 bits (113), Expect = 4e-08
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 7/139 (5%)
Frame = +3
Query: 141 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVWILAD---LQMNWIDKRLS 305
+ D LL+ Y++ P ++ V+ + + L+ + + + I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 306 WNAGEWGCSTWL-VSSERLWRPDVVL-XNAGATTAGDYALRARVSNNGSGSWIKRLDIST 479
W E+G L V S+ +WRPD+VL NA A +A + + G W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 480 PVSMQLGNWPKDMQTCTCK 536
+ + +P D QTC K
Sbjct: 152 SCEIDVEYFPFDEQTCVLK 170
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 49.6 bits (113), Expect = 4e-08
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 11/162 (6%)
Frame = +3
Query: 84 LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRE 242
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 243 SEST--VWILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVL-XNAGATTAGD 410
T VW+ + W D +L WN ++G T V SE +W PD+VL NA
Sbjct: 65 QIMTTNVWV----EQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVT 120
Query: 411 YALRARVSNNGSGSWIKRLDISTPVSMQLGNWPKDMQTCTCK 536
+A + + G W + + + +P D QTC K
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMK 162
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 49.2 bits (112), Expect = 5e-08
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 7/139 (5%)
Frame = +3
Query: 141 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVWILADLQMNWIDKRLS 305
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 306 WNAGEW-GCSTWLVSSERLWRPDVVLXN-AGATTAGDYALRARVSNNGSGSWIKRLDIST 479
WN E+ G ++ +LW+PD+++ N A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 480 PVSMQLGNWPKDMQTCTCK 536
+ + +P D Q C K
Sbjct: 178 TCKIDITWFPFDDQHCDMK 196
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 49.2 bits (112), Expect = 5e-08
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 7/139 (5%)
Frame = +3
Query: 141 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVWILADLQMNWIDKRLS 305
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 306 WNAGEW-GCSTWLVSSERLWRPDVVLXN-AGATTAGDYALRARVSNNGSGSWIKRLDIST 479
WN E+ G ++ +LW+PD+++ N A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 480 PVSMQLGNWPKDMQTCTCK 536
+ + +P D Q C K
Sbjct: 178 TCKIDITWFPFDDQHCDMK 196
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 48.8 bits (111), Expect = 6e-08
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Frame = +3
Query: 231 NIRESESTVWILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLXN-AGATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSGSWIKRLDISTPVSMQLGNWPKDMQTCTCK 536
G Y V+++GS ++ + M + +P D Q C K
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMK 128
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 48.4 bits (110), Expect = 8e-08
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Frame = +3
Query: 231 NIRESESTVWILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLXN-AGATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSGSWIKRLDISTPVSMQLGNWPKDMQTCTCK 536
G Y V+++GS ++ + M + +P D Q C K
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMK 128
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 48.4 bits (110), Expect = 8e-08
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Frame = +3
Query: 231 NIRESESTVWILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLXN-AGATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSGSWIKRLDISTPVSMQLGNWPKDMQTCTCK 536
G Y V++NGS ++ + + + +P D Q C K
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMK 128
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 48.4 bits (110), Expect = 8e-08
Identities = 40/143 (27%), Positives = 59/143 (41%), Gaps = 11/143 (7%)
Frame = +3
Query: 141 MIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESEST--VWILADLQMNWID 293
+ D LL+ Y+R P LT+ L N++ T VW+ + W D
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWV----EQRWND 92
Query: 294 KRLSWNAGEWGCSTWL-VSSERLWRPDVVL-XNAGATTAGDYALRARVSNNGSGSWIKRL 467
+L WN E+G L V SE +W PD+VL NA +A + G SW
Sbjct: 93 YKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNADGNYEVTLMTKATLKYTGDVSWKPPA 152
Query: 468 DISTPVSMQLGNWPKDMQTCTCK 536
+ + + +P D Q+C K
Sbjct: 153 IYKSSCEINVEYFPFDEQSCIMK 175
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 47.2 bits (107), Expect = 2e-07
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Frame = +3
Query: 231 NIRESESTVWILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLXN-AGATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSGSWIKRLDISTPVSMQLGNWPKDMQTCTCK 536
G Y V+++GS ++ + + + +P D Q C K
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMK 128
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 47.2 bits (107), Expect = 2e-07
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Frame = +3
Query: 231 NIRESESTVWILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLXN-AGATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSGSWIKRLDISTPVSMQLGNWPKDMQTCTCK 536
G Y V+++GS ++ + + + +P D Q C K
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMK 128
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 47.2 bits (107), Expect = 2e-07
Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 8/153 (5%)
Frame = +3
Query: 129 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVWILADLQMNWID 293
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 294 KRLSWNAGEWGCSTWLVSSERLWRPDVVLXNAGATTAGDYALR---ARVSNNGSGSWIKR 464
RLS+ S + ER+WRPD N + + R+S +G + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 465 LDISTPVSMQLGNWPKDMQTCTCKVRXXDCTIV 563
L I M+L N+P D Q+C + C V
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGSCKCIYV 188
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 47.2 bits (107), Expect = 2e-07
Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 7/162 (4%)
Frame = +3
Query: 72 YXFLLTCAIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NI 236
+ + A+A++ + +++ LL TY+ E P ++ +V++ L L ++
Sbjct: 4 WTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDV 63
Query: 237 RESESTVWILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLXN-AGATTAGD 410
E + L++ W D + WN ++G L + RLW+PDV++ N A G
Sbjct: 64 DEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGT 123
Query: 411 YALRARVSNNGSGSWIKRLDISTPVSMQLGNWPKDMQTCTCK 536
Y V NNG+ ++ + + + +P D Q C K
Sbjct: 124 YPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMK 165
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 46.8 bits (106), Expect = 3e-07
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 3/118 (2%)
Frame = +3
Query: 192 KIVVNLTL-HLRHANIRESESTVWILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 365
K+ VN L ++ N+ E + L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 366 PDVVLXN-AGATTAGDYALRARVSNNGSGSWIKRLDISTPVSMQLGNWPKDMQTCTCK 536
PD+VL N A Y + NG W+ + ++ + +P D QTC K
Sbjct: 111 PDIVLFNNADGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIMK 168
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 46.4 bits (105), Expect = 3e-07
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Frame = +3
Query: 231 NIRESESTVWILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLXN-AGATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSGSWIKRLDISTPVSMQLGNWPKDMQTCTCK 536
G Y V+++GS ++ + + + +P D Q C K
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMK 128
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 46.0 bits (104), Expect = 4e-07
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 10/152 (6%)
Frame = +3
Query: 114 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVWILADLQ 278
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 279 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLXNAGATTAG-DY---ALRARVSNNG 443
+ W L+W + E+ ++ V S +W PD+V+ + T+ G D ++ V N+G
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHS--VTSVGIDLEMPSVECIVFNSG 145
Query: 444 SGSWIKRLDISTPVSMQLGNWPKDMQTCTCKV 539
+ + + WP D+ CT +
Sbjct: 146 TILCVPFTTYTPVCEYDHTWWPYDILNCTIHI 177
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 44.8 bits (101), Expect = 1e-06
Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 15/163 (9%)
Frame = +3
Query: 141 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVWILADLQMNWIDKR 299
++D++L YD E+ D +V + L +R A I + + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 300 LSWN--AGEWGCSTWLVSSERLWRPDVVLXNAGATTAGDYALR---ARVSNNGSGSWIKR 464
L +N G T L + R+W PD+ N + + R+ NGS + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 465 LDISTPVSMQLGNWPKDMQTCTCKVRXXDCT---IVXKWXXGD 584
+ ++ M L +P D Q C+ ++ T +V W GD
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFLWKEGD 196
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 44.4 bits (100), Expect = 1e-06
Identities = 30/117 (25%), Positives = 46/117 (39%), Gaps = 3/117 (2%)
Frame = +3
Query: 195 IVVNLTLHLRHANIRESESTVWILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 371
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 372 VVLXNAGATTAGDYALRAR--VSNNGSGSWIKRLDISTPVSMQLGNWPKDMQTCTCK 536
+L N + VS+ G W+ + + + +P D Q C K
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLK 148
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 43.6 bits (98), Expect = 2e-06
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 16/170 (9%)
Frame = +3
Query: 120 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVWILADLQMNW 287
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 288 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLXNAG------ATTAGDYALRARVSNN 440
D RL++ G T V SE +W PD N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 441 GSGSWIKRLDISTPVSMQLGNWPKDMQTCTCKVRXXDCT---IVXKWXXG 581
GS + RL I+ M L +P D Q C ++ T I KW G
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 173
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 43.6 bits (98), Expect = 2e-06
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 8/145 (5%)
Frame = +3
Query: 117 ENATSLSLMIDSLLATYDRESPPDS--KIVVNLTLHL--RHANIRESESTVWILADLQMN 284
++ T+L + L YD P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 285 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLXNAGATT---AGDYALRARVSNNGSGS 452
W D LSW ++ G + V S+ +W PD+ + N+G T G V ++GS S
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 453 WIKRLDISTPVSMQLGNWPKDMQTC 527
+ + + +WP D C
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRC 183
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 42.3 bits (95), Expect = 5e-06
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 16/170 (9%)
Frame = +3
Query: 120 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVWILADLQMNW 287
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 288 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLXNAG------ATTAGDYALRARVSNN 440
D RL++ G T V SE +W PD N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 441 GSGSWIKRLDISTPVSMQLGNWPKDMQTCTCKVRXXDCT---IVXKWXXG 581
GS + RL I+ M L +P D Q C ++ T I KW G
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNAG 173
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.9 bits (94), Expect = 7e-06
Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 15/163 (9%)
Frame = +3
Query: 141 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVWILADLQMNWIDKR 299
++D++L YD E+ D VV + + +R + I + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 300 LSWN--AGEWGCSTWLVSSERLWRPDVVLXNAGATTAGDYALR---ARVSNNGSGSWIKR 464
L +N G T L + R+W PD+ N + + R+ NGS + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 465 LDISTPVSMQLGNWPKDMQTCTCKVRXXDCT---IVXKWXXGD 584
+ ++ M L +P D Q C+ ++ T +V W GD
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFLWKEGD 196
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 35.1 bits (77), Expect = 8e-04
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 12/111 (10%)
Frame = +3
Query: 285 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLXNAG------ATTAGDYALRARVSN 437
W D RL++ G T V SE +W PD N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 438 NGSGSWIKRLDISTPVSMQLGNWPKDMQTCTCKVRXXDCT---IVXKWXXG 581
+GS + RL I+ M L +P D Q C ++ T I KW G
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 112
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 24.2 bits (50), Expect = 1.5
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = -2
Query: 813 PRXXPPNPQGEXXAQTPAPGRQSXCTPXXXYPXXNPEQIPP 691
P P PQ AP R S P P P PP
Sbjct: 16 PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56
Score = 21.8 bits (44), Expect = 8.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 338 PSAAAPFPCVPTQS 297
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 22.6 bits (46), Expect = 4.7
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 426 RVSNNGSGSWIKRLDISTPVSMQLGNWPKDMQTCT 530
RV +G WI IS+P +WP++++ T
Sbjct: 152 RVLATIAGVWILSGAISSPPLAGWNDWPEELEPGT 186
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 22.6 bits (46), Expect = 4.7
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 426 RVSNNGSGSWIKRLDISTPVSMQLGNWPKDMQTCT 530
RV +G WI IS+P +WP++++ T
Sbjct: 152 RVLATIAGVWILSGAISSPPLAGWNDWPEELEPGT 186
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 22.6 bits (46), Expect = 4.7
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 426 RVSNNGSGSWIKRLDISTPVSMQLGNWPKDMQTCT 530
RV +G WI IS+P +WP++++ T
Sbjct: 152 RVLATIAGVWILSGAISSPPLAGWNDWPEELEPGT 186
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.8 bits (44), Expect = 8.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 137 GQ*CCVFAFCRTSYSTSEEKXVTR 66
G+ CC F T Y + K VT+
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQ 625
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,625
Number of Sequences: 438
Number of extensions: 4813
Number of successful extensions: 66
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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