Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_N03
(784 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1310 + 29238644-29240260 33 0.34
09_04_0506 - 18188785-18190599 32 0.59
07_01_0373 + 2783596-2784933 31 0.78
11_08_0048 - 28022335-28022520,28022607-28022699,28022804-280228... 29 3.2
02_01_0219 - 1437685-1437723,1437932-1438091,1438385-1438514,143... 29 3.2
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 29 4.2
02_05_0084 - 25690346-25691206 29 4.2
04_01_0041 - 464695-464850,467485-469029 29 5.5
01_05_0227 - 19512866-19514983 29 5.5
02_05_0788 + 31758119-31758384,31758482-31758634,31759385-317595... 28 7.3
01_06_1743 + 39601644-39602023,39602301-39602734,39602828-396030... 28 7.3
12_02_0985 + 25052753-25053691 28 9.6
11_06_0202 - 21184217-21184503,21184622-21184982 28 9.6
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 28 9.6
>06_03_1310 + 29238644-29240260
Length = 538
Score = 32.7 bits (71), Expect = 0.34
Identities = 27/95 (28%), Positives = 38/95 (40%), Gaps = 2/95 (2%)
Frame = +3
Query: 474 AGHPFILSHYYWRSRPYASSHPPLAISGYINPII--KSPNSIHQPPQT*HPFPSIPWTPY 647
A HPF S ++ P + P G P+ +SP H PP+ P P P +P
Sbjct: 351 AAHPFDCSKAQCQATPPTTRRP-----GGRTPLAPHRSPLPHHMPPRRTPPTPPPPSSPT 405
Query: 648 *KEFAPGLKPPLSSEAPSAYLTPLVTGHG*RGFXP 752
P PP SE+P + + P + G P
Sbjct: 406 PSHLPP--PPPTYSESPKSSMPPSTSPPSSHGASP 438
Score = 32.7 bits (71), Expect = 0.34
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = +3
Query: 513 SRPYASSHPPLAISGYINPIIKSPNSIHQPPQT*HPFPSIPWTPY*KEFAP----GLKPP 680
S P +SS PP GY+ P + P PP P P P +P ++P G K P
Sbjct: 437 SPPSSSSSPPTEHPGYVLPPLTPPPPTTTPPGHHAPVPGTPSSPPSSSWSPPQGGGGKLP 496
Query: 681 LSSEAPSAYLTP 716
AY +P
Sbjct: 497 FPPVHGVAYSSP 508
>09_04_0506 - 18188785-18190599
Length = 604
Score = 31.9 bits (69), Expect = 0.59
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Frame = +3
Query: 567 PIIKSPNSIHQPPQT*HPFPSIPWTPY*KEFAPGLKPPLSSEAPSAY-LTPLVTGHG*RG 743
P+ PN +H PPQ P + P P + PG + Y P+V G+G G
Sbjct: 120 PVPDRPNPVHLPPQPQPPVAAAPPPPPHNQIQPGGGDGFHRQGGGNYGGGPIVVGNGGGG 179
Query: 744 FXP----LFIGQ 767
P LF+G+
Sbjct: 180 DGPGGTTLFVGE 191
>07_01_0373 + 2783596-2784933
Length = 445
Score = 31.5 bits (68), Expect = 0.78
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = -3
Query: 92 EEEKALTKEGMAEAAETXKGTISSMNRS 9
E+++ LTK G + +ET KG++ S++RS
Sbjct: 151 EQQQQLTKSGCSSTSETSKGSVLSLSRS 178
>11_08_0048 -
28022335-28022520,28022607-28022699,28022804-28022882,
28022951-28023061,28023133-28023390,28023468-28023970,
28024094-28024729,28024778-28025116
Length = 734
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/66 (30%), Positives = 24/66 (36%)
Frame = +3
Query: 519 PYASSHPPLAISGYINPIIKSPNSIHQPPQT*HPFPSIPWTPY*KEFAPGLKPPLSSEAP 698
P + S PP+ S NPI P +PP P P P P PP +A
Sbjct: 265 PVSLSRPPVVASPRDNPIASPPRP--EPPVASPPRPEPPVASPPGSEPPVASPPTEKDAE 322
Query: 699 SAYLTP 716
L P
Sbjct: 323 EQSLVP 328
>02_01_0219 -
1437685-1437723,1437932-1438091,1438385-1438514,
1438627-1438696,1439264-1439407,1439771-1439837,
1439970-1440019,1440386-1440559,1440881-1440934,
1441008-1441112
Length = 330
Score = 29.5 bits (63), Expect = 3.2
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +1
Query: 283 TETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSL--KIPVTVDLCWTTADVT 456
TE +N V V L SS GY D + ++ V + K+ V +D TAD++
Sbjct: 167 TEAGANRVLVCDLH--SSQAMGYFDIPVDHVYGQVMNLIGDVRGKVAVMMDDMIDTADIS 224
Query: 457 VEGVNVLATPSSSRITIGGLALMHQ 531
+ +N+L P G L+HQ
Sbjct: 225 LPNINILMKPIKLGTIAKGAELLHQ 249
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 525 ASSHPPLAISGYINPIIKSPNSIHQP-PQT*HPFPSIPWTPY*KEFAPGLKPPLSSEAPS 701
A+ PPLA+ P PN P P T +P PS P P + PP+ S APS
Sbjct: 22 AAGTPPLAVPATNTP----PNPATTPTPLTPNPNPSPTLPPPPMSTPPVVAPPMHSFAPS 77
>02_05_0084 - 25690346-25691206
Length = 286
Score = 29.1 bits (62), Expect = 4.2
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +1
Query: 427 DLCWTTADVTVEGVNVL-ATPSSSRITIGGLALMHQATLPWRSR----ATSTRSSNPRIP 591
D+ + V GV + +T +++ +GG+AL A LPW SR AT+ S+ P
Sbjct: 194 DVVYPPPPAAVGGVGMFHSTTTTTGGMLGGMAL---AVLPWVSRGQSPATAAASAYYTSP 250
Query: 592 YTNHPRL 612
Y PRL
Sbjct: 251 YHMSPRL 257
>04_01_0041 - 464695-464850,467485-469029
Length = 566
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 244 IIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPS-APSLKIPV 420
+I R + D++ T +SN + V +LP VSS + Y D ++ + P P ++ V
Sbjct: 40 LISVFRPFTDVSLTLCRSNYIGVTNLPIVSSECEAYYDDFVSGADFTARPQVVPPWRLAV 99
Query: 421 TVD 429
+D
Sbjct: 100 PLD 102
>01_05_0227 - 19512866-19514983
Length = 705
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 461 STVTSAVVQQRSTVTGILRLGAEGKTTASRL 369
S +T + +QQ + ++ LG GKTT ++L
Sbjct: 18 SKLTESSIQQNIKIVSVIGLGGSGKTTLAKL 48
>02_05_0788 +
31758119-31758384,31758482-31758634,31759385-31759509,
31759650-31759678,31760943-31761008,31761059-31761125,
31761226-31761370,31761404-31761451,31762014-31762182,
31762645-31762779,31762858-31763064,31763608-31763735,
31763815-31763866,31764046-31764060,31764502-31764609
Length = 570
Score = 28.3 bits (60), Expect = 7.3
Identities = 21/86 (24%), Positives = 36/86 (41%)
Frame = +1
Query: 235 QRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
Q I + ++ L N TV + N + GY+ +N+ + PSLK
Sbjct: 198 QVFCIVLEMFFYQLLQLLKVPNEKTVNVIENAIQTLPGYQPPKHINIGEYISSHVPSLK- 256
Query: 415 PVTVDLCWTTADVTVEGVNVLATPSS 492
D C T ++ +EG++ L S+
Sbjct: 257 ----DFCEPTVEM-LEGMSALKALST 277
>01_06_1743 +
39601644-39602023,39602301-39602734,39602828-39603006,
39603636-39603716,39603828-39603914,39604000-39604006,
39604241-39604312,39604712-39604792,39605156-39605262
Length = 475
Score = 28.3 bits (60), Expect = 7.3
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
Frame = +2
Query: 539 SPGDLGLHQPDHQIPEFHTPTTPDL-TSISINPLDAVLKGVR-----AGVKASVVIRGSI 700
SPG G+ P Q+P F S S++ D + + R G+ ++ R SI
Sbjct: 85 SPGRKGVGSPSRQVPRFAAAAAAGTEPSPSLDRRDPMSRSARRHRQPGGIGDEILQRASI 144
Query: 701 SVSHPPRHWAWLKGVRPPFH 760
S S PPR + P H
Sbjct: 145 S-SSPPRADPFASAPASPAH 163
>12_02_0985 + 25052753-25053691
Length = 312
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -3
Query: 524 IRARPPIVMREDEGVASTLTPSTVTSAVVQQRSTVTGILRLGAEGKTTASRLTRYASR*P 345
+ +R + +R D S+ + +T S + S + GAEG TTAS LT S P
Sbjct: 127 VSSRTGLFLRGDCHRNSSASNATNCSIPAETMSRMVPTASCGAEGNTTASALTCVTSTSP 186
>11_06_0202 - 21184217-21184503,21184622-21184982
Length = 215
Score = 27.9 bits (59), Expect = 9.6
Identities = 24/75 (32%), Positives = 31/75 (41%)
Frame = +3
Query: 519 PYASSHPPLAISGYINPIIKSPNSIHQPPQT*HPFPSIPWTPY*KEFAPGLKPPLSSEAP 698
PY S P S + +SP + P Q+ PS+P P P PP +S +P
Sbjct: 128 PYEPSSPQQPPSA--GKLAESPAAT--PAQSPTAAPSLPQAP-----KPSSPPPFTSPSP 178
Query: 699 SAYLTPLVTGHG*RG 743
P T HG RG
Sbjct: 179 LPPPPPPPTSHGARG 193
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 27.9 bits (59), Expect = 9.6
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 9/70 (12%)
Frame = +3
Query: 519 PYASSHPPLAISGYINPIIKSPNSIHQPPQT*H------PFP---SIPWTPY*KEFAPGL 671
PYAS PP S NP +P PP P P + P T + + PG+
Sbjct: 441 PYASYPPPPPGSSMYNPPPPAPGQATPPPYGVQYAPPPAPIPPPGTAPSTDGAQNYPPGV 500
Query: 672 KPPLSSEAPS 701
PP SS AP+
Sbjct: 501 TPP-SSGAPT 509
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,411,632
Number of Sequences: 37544
Number of extensions: 507483
Number of successful extensions: 1487
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1485
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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