Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_N02
         (818 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY258142-1|AAP45947.1|  737|Homo sapiens small-conductance calci...    30   8.8  
AY049734-1|AAL10706.1|  737|Homo sapiens small-conductance calci...    30   8.8  
AL954342-3|CAH72739.1|  731|Homo sapiens potassium intermediate/...    30   8.8  
AL606500-5|CAH71911.1|  731|Homo sapiens potassium intermediate/...    30   8.8  
AL390204-3|CAH71151.1|  731|Homo sapiens potassium intermediate/...    30   8.8  
AJ251016-1|CAB61331.1|  736|Homo sapiens SK3 protein protein.          30   8.8  
AF336797-1|AAK15345.1|  736|Homo sapiens small-conductance calci...    30   8.8  
AF031815-1|AAC26099.1|  731|Homo sapiens calcium-activated potas...    30   8.8  

>AY258142-1|AAP45947.1|  737|Homo sapiens small-conductance
           calcium-activated potassium channel SK3 protein.
          Length = 737

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +1

Query: 160 ESREPAPPHDLSQLESRKALSSHPSYLAYSLTIFPGSPPTH 282
           + ++  PPH LSQL   ++   HP  L  S T F   P ++
Sbjct: 81  QQQQQQPPHPLSQLAQLQSQPVHPGLLHSSPTAFRAPPSSN 121


>AY049734-1|AAL10706.1|  737|Homo sapiens small-conductance
           calcium-activated potassium channel SK3 protein.
          Length = 737

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +1

Query: 160 ESREPAPPHDLSQLESRKALSSHPSYLAYSLTIFPGSPPTH 282
           + ++  PPH LSQL   ++   HP  L  S T F   P ++
Sbjct: 81  QQQQQQPPHPLSQLAQLQSQPVHPGLLHSSPTAFRAPPSSN 121


>AL954342-3|CAH72739.1|  731|Homo sapiens potassium
           intermediate/small conductance calcium-activated
           channel, subfamily N protein.
          Length = 731

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +1

Query: 160 ESREPAPPHDLSQLESRKALSSHPSYLAYSLTIFPGSPPTH 282
           + ++  PPH LSQL   ++   HP  L  S T F   P ++
Sbjct: 75  QQQQQQPPHPLSQLAQLQSQPVHPGLLHSSPTAFRAPPSSN 115


>AL606500-5|CAH71911.1|  731|Homo sapiens potassium
           intermediate/small conductance calcium-activated
           channel, subfamily N protein.
          Length = 731

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +1

Query: 160 ESREPAPPHDLSQLESRKALSSHPSYLAYSLTIFPGSPPTH 282
           + ++  PPH LSQL   ++   HP  L  S T F   P ++
Sbjct: 75  QQQQQQPPHPLSQLAQLQSQPVHPGLLHSSPTAFRAPPSSN 115


>AL390204-3|CAH71151.1|  731|Homo sapiens potassium
           intermediate/small conductance calcium-activated
           channel, subfamily N protein.
          Length = 731

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +1

Query: 160 ESREPAPPHDLSQLESRKALSSHPSYLAYSLTIFPGSPPTH 282
           + ++  PPH LSQL   ++   HP  L  S T F   P ++
Sbjct: 75  QQQQQQPPHPLSQLAQLQSQPVHPGLLHSSPTAFRAPPSSN 115


>AJ251016-1|CAB61331.1|  736|Homo sapiens SK3 protein protein.
          Length = 736

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +1

Query: 160 ESREPAPPHDLSQLESRKALSSHPSYLAYSLTIFPGSPPTH 282
           + ++  PPH LSQL   ++   HP  L  S T F   P ++
Sbjct: 80  QQQQQQPPHPLSQLAQLQSQPVHPGLLHSSPTAFRAPPSSN 120


>AF336797-1|AAK15345.1|  736|Homo sapiens small-conductance
           calcium-activated potassium channel protein.
          Length = 736

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +1

Query: 160 ESREPAPPHDLSQLESRKALSSHPSYLAYSLTIFPGSPPTH 282
           + ++  PPH LSQL   ++   HP  L  S T F   P ++
Sbjct: 80  QQQQQQPPHPLSQLAQLQSQPVHPGLLHSSPTAFRAPPSSN 120


>AF031815-1|AAC26099.1|  731|Homo sapiens calcium-activated
           potassium channel protein.
          Length = 731

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +1

Query: 160 ESREPAPPHDLSQLESRKALSSHPSYLAYSLTIFPGSPPTH 282
           + ++  PPH LSQL   ++   HP  L  S T F   P ++
Sbjct: 75  QQQQQQPPHPLSQLAQLQSQPVHPGLLHSSPTAFRAPPSSN 115


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,230,984
Number of Sequences: 237096
Number of extensions: 2992988
Number of successful extensions: 11749
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11737
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10203625794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)