Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_N02
(818 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 58 1e-08
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 58 1e-08
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 57 3e-08
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 57 3e-08
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 52 1e-06
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 51 2e-06
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 50 5e-06
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 49 7e-06
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 49 9e-06
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 49 9e-06
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 49 9e-06
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 49 9e-06
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 49 9e-06
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 48 1e-05
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 48 1e-05
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 48 1e-05
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 48 1e-05
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 48 1e-05
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 46 5e-05
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 46 5e-05
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 40 0.003
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 35 0.12
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 34 0.20
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 58.4 bits (135), Expect = 1e-08
Identities = 39/141 (27%), Positives = 60/141 (42%)
Frame = +1
Query: 16 GALFFDVAKAFDKVWHNGLIFKLFNMGVPG*SRCSSYGTSCRTALFDIESREPAPPHDLS 195
G + D+ AFD VWH+GL+ KL +G P F + +
Sbjct: 604 GLVTLDIEAAFDTVWHDGLLHKLKMIGTPI-YLIKIVQNFLTHRYFSVNLNSSQSARRIL 662
Query: 196 QLESRKALSSHPSYLAYSLTIFPGSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALAL 375
+ P+ P + L+LFADD VY + + S I + +QS L
Sbjct: 663 NAGVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNEL 722
Query: 376 GQWFRKWRIDINPAKSTAVLF 438
+++KW+I INP K+ A+ F
Sbjct: 723 DIYYKKWKIKINPNKTNAIFF 743
Score = 35.9 bits (79), Expect = 0.067
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +3
Query: 120 IIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPR 266
I+++FL++R F + ++S+ R L AGVPQG +DIP+
Sbjct: 638 IVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQ 686
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 58.4 bits (135), Expect = 1e-08
Identities = 39/141 (27%), Positives = 60/141 (42%)
Frame = +1
Query: 16 GALFFDVAKAFDKVWHNGLIFKLFNMGVPG*SRCSSYGTSCRTALFDIESREPAPPHDLS 195
G + D+ AFD VWH+GL+ KL +G P F + +
Sbjct: 552 GLVTLDIEAAFDTVWHDGLLHKLKMIGTPI-YLIKIVQNFLTHRYFSVNLNSSQSARRIL 610
Query: 196 QLESRKALSSHPSYLAYSLTIFPGSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALAL 375
+ P+ P + L+LFADD VY + + S I + +QS L
Sbjct: 611 NAGVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNEL 670
Query: 376 GQWFRKWRIDINPAKSTAVLF 438
+++KW+I INP K+ A+ F
Sbjct: 671 DIYYKKWKIKINPNKTNAIFF 691
Score = 35.9 bits (79), Expect = 0.067
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +3
Query: 120 IIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPR 266
I+++FL++R F + ++S+ R L AGVPQG +DIP+
Sbjct: 586 IVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQ 634
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 57.2 bits (132), Expect = 3e-08
Identities = 45/148 (30%), Positives = 67/148 (45%), Gaps = 5/148 (3%)
Frame = +1
Query: 10 YTGALFFDVAKAFDKVWHNGLIFKLFN-MGVPG*SRCSSYGTSCRTALFDIESREPAPPH 186
Y +LF D+ +AFD+VWH GL K+ + P SY R A+ + + H
Sbjct: 577 YCNSLFLDIREAFDRVWHIGLQLKIKQTLPAPYFGLLKSYLEGRRFAVRFHSAI--STEH 634
Query: 187 DLSQLESRKALSSHPSYLAYSLTIFPGSPPTH----LALFADDTTVYYSSRNKSLIAKKL 354
+++ + ++ Y YS + + LA FADD V Y SR + A +
Sbjct: 635 NVAAGVPQGSVLGPLLYCLYSHDMPQPDVSLYGKSMLATFADDVCVTYRSRCEHDAADGI 694
Query: 355 QSAALALGQWFRKWRIDINPAKSTAVLF 438
Q A +W R+W I IN +KS V F
Sbjct: 695 QDFAYRFSEWARRWNIGINSSKSNNVCF 722
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 56.8 bits (131), Expect = 3e-08
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
Frame = +1
Query: 1 YWLYTGALFFDVAKAFDKVWHNGLIFKLFNMGVPG*SR--CSSY------GTSCRTALFD 156
Y Y A+F DV++AFDKVW +GL+FK+ + +P + SY C TA
Sbjct: 572 YREYCTAVFLDVSQAFDKVWLDGLMFKI-KISLPESTHKLLKSYLYDRKFAVRCNTATST 630
Query: 157 IESREPAPPHDLSQLESRKALSSHPSYLAYSLTIFPGSPPTHLALFADDTTVYYSSRNKS 336
+ + E P + ++ YL Y+ I P + ++ FADDT + SR+
Sbjct: 631 VHTIEAGVP--------QGSVLGPTLYLIYTADI-PTNSRLTVSTFADDTAILSRSRSPI 681
Query: 337 LIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 438
+L + + +W WRI +N K V F
Sbjct: 682 QATAQLALYLIDIKKWLSDWRIKVNEQKCKHVTF 715
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 51.6 bits (118), Expect = 1e-06
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Frame = +1
Query: 10 YTGALFFDVAKAFDKVWHNGLIFKL-----FNMGVPG*SRCSSYGTSCRTALFDIESREP 174
Y A+F D+++AFD+VWH GL+ KL +N+ + SY T+ RT F+++ +
Sbjct: 622 YCSAVFLDISEAFDRVWHEGLLLKLAKILPYNLYI----ILESYLTN-RT--FEVKD-QA 673
Query: 175 APPHDLSQLESRKALSSHPSYLAYSL--------TIFPGSPPTHLAL--FADDTTVYYSS 324
Q+ + S+ L YS+ I+ SP + L +ADDT V S
Sbjct: 674 GETSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYIYRPSPTERIMLSTYADDTIVLSSD 733
Query: 325 RNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 438
+ + ++ + W KW I +N AK+ V+F
Sbjct: 734 TLATAATRNNENYLKSFSDWADKWGISVNAAKTGHVIF 771
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 51.2 bits (117), Expect = 2e-06
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 15/158 (9%)
Frame = +1
Query: 10 YTGALFFDVAKAFDKVWHNGLIFKL-----FNMGVPG*SRCSSYGTSCRTALFDIESREP 174
Y A+F D+++AFD+VWH GL+ KL +N+ + SY T+ RT F+++ +
Sbjct: 634 YCSAVFLDISEAFDRVWHEGLLLKLAKILPYNLYI----ILESYLTN-RT--FEVKD-QA 685
Query: 175 APPHDLSQLESRKALSSHPSYLAYSL--------TIFPGSPPTHLAL--FADDTTVYYSS 324
Q+ + S+ L YS+ I+ SP + L +ADDT V S
Sbjct: 686 GETSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTIVLSSD 745
Query: 325 RNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 438
+ + ++ W KW I +N AK+ V+F
Sbjct: 746 TLATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIF 783
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 49.6 bits (113), Expect = 5e-06
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 2/145 (1%)
Frame = +1
Query: 10 YTGALFFDVAKAFDKVWHNGLIFKLFNMGVPG*SRCSSYGTSCRTALFDIESREPAPPHD 189
Y A+F DVA+AFD+VW +GL+FK+ + +P + + +F I + + D
Sbjct: 573 YCTAIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTH-KLLKSYLYNTVFAIRC-DTSTSRD 629
Query: 190 LSQLESRKALSSHPSYLAYSLTI--FPGSPPTHLALFADDTTVYYSSRNKSLIAKKLQSA 363
+ +E+ S + Y+L FP + FADDT + S+ L
Sbjct: 630 CA-IEAGVPQGSVLGPILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRH 688
Query: 364 ALALGQWFRKWRIDINPAKSTAVLF 438
++ +W WRI IN K V F
Sbjct: 689 LTSVERWLADWRISINVQKCKQVTF 713
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 49.2 bits (112), Expect = 7e-06
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 2/145 (1%)
Frame = +1
Query: 10 YTGALFFDVAKAFDKVWHNGLIFKLFNMGVPG*SRCSSYGTSCRTALFDIESREPAPPHD 189
Y A+F DVA+AFD+VW +GL+FK+ + +P + + +F I + + D
Sbjct: 573 YCTAIFLDVAQAFDRVWLDGLLFKIIKL-LPQ-NTHKLLKSYLYNRVFAIRC-DTSTSRD 629
Query: 190 LSQLESRKALSSHPSYLAYSL--TIFPGSPPTHLALFADDTTVYYSSRNKSLIAKKLQSA 363
+ +E+ S + Y+L FP + FADDT + S+ L
Sbjct: 630 CA-IEAGVPQGSVLGPILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRH 688
Query: 364 ALALGQWFRKWRIDINPAKSTAVLF 438
++ +W WRI IN K V F
Sbjct: 689 LTSVERWLADWRISINVQKCKQVTF 713
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 48.8 bits (111), Expect = 9e-06
Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 9/147 (6%)
Frame = +1
Query: 10 YTGALFFDVAKAFDKVWHNGLIFKLFNM-GVPG*SRCSSYGTSCRTALFDIESREPAPPH 186
Y A+F D+ +AFD+VWH+GLI K+ + P SY R + + + P
Sbjct: 578 YCNAVFIDMQQAFDRVWHDGLISKVKKLFPAPYYGVLKSY-LEDRRFMVRVRNSYSIPRV 636
Query: 187 DLSQLESRKALSSHPSYLAYSLTIFPGSPPTH--------LALFADDTTVYYSSRNKSLI 342
+ + L P + P H LA +ADD + YSS +
Sbjct: 637 MRAGVPQGSVLG--PLLYSVFTADLPCPNAYHMADPRKALLATYADDIALLYSSNCCNEA 694
Query: 343 AKKLQSAALALGQWFRKWRIDINPAKS 423
A+ LQ L W ++W + +NP K+
Sbjct: 695 ARGLQEYLTTLAAWCKRWILKVNPQKT 721
Score = 35.1 bits (77), Expect = 0.12
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 120 IIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP 263
+++ +L +R F RV + S PR + AGVPQG D+P
Sbjct: 613 VLKSYLEDRRFMVRVRNSYSIPRVMRAGVPQGSVLGPLLYSVFTADLP 660
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 48.8 bits (111), Expect = 9e-06
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Frame = +1
Query: 19 ALFFDVAKAFDKVWHNGLIFKLFNMGVPG--*SRCSSYGTSCRTALFDIESREPAPPHDL 192
A F D+ +AFD+VWH+GL++KL + +P +Y S RT I+ + ++
Sbjct: 181 ATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENY-LSNRTFSVRIDGETTSRIGNI 238
Query: 193 SQLESRKALSSHPSYLAYSLTI-------------FPGSPPTH--LALFADDTTVYYSSR 327
+ ++ Y YS + FP PT+ LA +ADDT + S+
Sbjct: 239 RAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSK 298
Query: 328 NKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 438
L Q+ +W +KW I IN K+ +LF
Sbjct: 299 YTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILF 335
Score = 33.5 bits (73), Expect = 0.36
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 120 IIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP 263
++ ++LSNR+F R++G T S + AGVPQG +D+P
Sbjct: 213 LLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMP 261
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 48.8 bits (111), Expect = 9e-06
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Frame = +1
Query: 19 ALFFDVAKAFDKVWHNGLIFKLFNMGVPG--*SRCSSYGTSCRTALFDIESREPAPPHDL 192
A F D+ +AFD+VWH+GL++KL + +P +Y S RT I+ + ++
Sbjct: 628 ATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENY-LSNRTFSVRIDGETTSRIGNI 685
Query: 193 SQLESRKALSSHPSYLAYSLTI-------------FPGSPPTH--LALFADDTTVYYSSR 327
+ ++ Y YS + FP PT+ LA +ADDT + S+
Sbjct: 686 RAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSK 745
Query: 328 NKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 438
L Q+ +W +KW I IN K+ +LF
Sbjct: 746 YTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILF 782
Score = 33.5 bits (73), Expect = 0.36
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 120 IIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP 263
++ ++LSNR+F R++G T S + AGVPQG +D+P
Sbjct: 660 LLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMP 708
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 48.8 bits (111), Expect = 9e-06
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Frame = +1
Query: 19 ALFFDVAKAFDKVWHNGLIFKLFNMGVPG--*SRCSSYGTSCRTALFDIESREPAPPHDL 192
A F D+ +AFD+VWH+GL++KL + +P +Y S RT I+ + ++
Sbjct: 628 ATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENY-LSNRTFSVRIDGETTSRIGNI 685
Query: 193 SQLESRKALSSHPSYLAYSLTI-------------FPGSPPTH--LALFADDTTVYYSSR 327
+ ++ Y YS + FP PT+ LA +ADDT + S+
Sbjct: 686 RAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSK 745
Query: 328 NKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 438
L Q+ +W +KW I IN K+ +LF
Sbjct: 746 YTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILF 782
Score = 33.5 bits (73), Expect = 0.36
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 120 IIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP 263
++ ++LSNR+F R++G T S + AGVPQG +D+P
Sbjct: 660 LLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMP 708
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 48.8 bits (111), Expect = 9e-06
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Frame = +1
Query: 19 ALFFDVAKAFDKVWHNGLIFKLFNMGVPG--*SRCSSYGTSCRTALFDIESREPAPPHDL 192
A F D+ +AFD+VWH+GL++KL + +P +Y S RT I+ + ++
Sbjct: 628 ATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENY-LSNRTFSVRIDGETTSRIGNI 685
Query: 193 SQLESRKALSSHPSYLAYSLTI-------------FPGSPPTH--LALFADDTTVYYSSR 327
+ ++ Y YS + FP PT+ LA +ADDT + S+
Sbjct: 686 RAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSK 745
Query: 328 NKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 438
L Q+ +W +KW I IN K+ +LF
Sbjct: 746 YTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILF 782
Score = 33.5 bits (73), Expect = 0.36
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 120 IIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP 263
++ ++LSNR+F R++G T S + AGVPQG +D+P
Sbjct: 660 LLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMP 708
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 48.4 bits (110), Expect = 1e-05
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 15/158 (9%)
Frame = +1
Query: 10 YTGALFFDVAKAFDKVWHNGLIFKL-----FNMGVPG*SRCSSYGTSCRTALFDIESREP 174
Y A+F D+++AFD+VWH GL+ KL +N+ + SY T+ RT F+++ +
Sbjct: 506 YCSAVFLDISEAFDRVWHEGLLLKLAKILPYNLYI----ILESYLTN-RT--FEVKD-QA 557
Query: 175 APPHDLSQLESRKALSSHPSYLAYSL--------TIFPGSPPTHLAL--FADDTTVYYSS 324
Q+ + S+ + YS+ I+ SP + L +ADDT V S
Sbjct: 558 GETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSD 617
Query: 325 RNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 438
+ + ++ W KW I +N AK+ V++
Sbjct: 618 ILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIY 655
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 48.4 bits (110), Expect = 1e-05
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 15/158 (9%)
Frame = +1
Query: 10 YTGALFFDVAKAFDKVWHNGLIFKL-----FNMGVPG*SRCSSYGTSCRTALFDIESREP 174
Y A+F D+++AFD+VWH GL+ KL +N+ + SY T+ RT F+++ +
Sbjct: 622 YCSAVFLDISEAFDRVWHEGLLLKLAKILPYNLYI----ILESYLTN-RT--FEVKD-QA 673
Query: 175 APPHDLSQLESRKALSSHPSYLAYSL--------TIFPGSPPTHLAL--FADDTTVYYSS 324
Q+ + S+ + YS+ I+ SP + L +ADDT V S
Sbjct: 674 GETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSD 733
Query: 325 RNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 438
+ + ++ W KW I +N AK+ V++
Sbjct: 734 ILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIY 771
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 48.4 bits (110), Expect = 1e-05
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 15/158 (9%)
Frame = +1
Query: 10 YTGALFFDVAKAFDKVWHNGLIFKL-----FNMGVPG*SRCSSYGTSCRTALFDIESREP 174
Y A+F D+++AFD+VWH GL+ KL +N+ + SY T+ RT F+++ +
Sbjct: 622 YCSAVFLDISEAFDRVWHEGLLLKLAKILPYNLYI----ILESYLTN-RT--FEVKD-QA 673
Query: 175 APPHDLSQLESRKALSSHPSYLAYSL--------TIFPGSPPTHLAL--FADDTTVYYSS 324
Q+ + S+ + YS+ I+ SP + L +ADDT V S
Sbjct: 674 GETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSD 733
Query: 325 RNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 438
+ + ++ W KW I +N AK+ V++
Sbjct: 734 ILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIY 771
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 48.4 bits (110), Expect = 1e-05
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 15/158 (9%)
Frame = +1
Query: 10 YTGALFFDVAKAFDKVWHNGLIFKL-----FNMGVPG*SRCSSYGTSCRTALFDIESREP 174
Y A+F D+++AFD+VWH GL+ KL +N+ + SY T+ RT F+++ +
Sbjct: 584 YCSAVFLDISEAFDRVWHEGLLLKLAKILPYNLYI----ILESYLTN-RT--FEVKD-QA 635
Query: 175 APPHDLSQLESRKALSSHPSYLAYSL--------TIFPGSPPTHLAL--FADDTTVYYSS 324
Q+ + S+ + YS+ I+ SP + L +ADDT V S
Sbjct: 636 GETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSD 695
Query: 325 RNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 438
+ + ++ W KW I +N AK+ V++
Sbjct: 696 ILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIY 733
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 48.4 bits (110), Expect = 1e-05
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 15/158 (9%)
Frame = +1
Query: 10 YTGALFFDVAKAFDKVWHNGLIFKL-----FNMGVPG*SRCSSYGTSCRTALFDIESREP 174
Y A+F D+++AFD+VWH GL+ KL +N+ + SY T+ RT F+++ +
Sbjct: 622 YCSAVFLDISEAFDRVWHEGLLLKLAKILPYNLYI----ILESYLTN-RT--FEVKD-QA 673
Query: 175 APPHDLSQLESRKALSSHPSYLAYSL--------TIFPGSPPTHLAL--FADDTTVYYSS 324
Q+ + S+ + YS+ I+ SP + L +ADDT V S
Sbjct: 674 GETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSD 733
Query: 325 RNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 438
+ + ++ W KW I +N AK+ V++
Sbjct: 734 ILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIY 771
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 46.4 bits (105), Expect = 5e-05
Identities = 42/156 (26%), Positives = 61/156 (39%), Gaps = 13/156 (8%)
Frame = +1
Query: 10 YTGALFFDVAKAFDKVWHNGLIFKLFNMGVPG*SRCSSYGTSCRTALFDIESREPAPPHD 189
Y F D+ +AFD+VWH GL++K + P RT ++ +
Sbjct: 579 YAVGAFLDIQQAFDRVWHPGLLYKAKRLFPPQLYLVVKSFLEERTFHVSVDGYK------ 632
Query: 190 LSQLESRKALSSHPSYLAYSL-TIFPGSPPTH------------LALFADDTTVYYSSRN 330
S ++ A S L +L ++F PTH +A +ADDT V S++
Sbjct: 633 -SSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKS 691
Query: 331 KSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 438
LQ A QW W + IN K V F
Sbjct: 692 ILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTF 727
Score = 42.3 bits (95), Expect = 8e-04
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +3
Query: 117 LIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP 263
L+++ FL R+F V+G +SS +P+ AGVPQG +D+P
Sbjct: 613 LVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMP 661
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 46.4 bits (105), Expect = 5e-05
Identities = 42/156 (26%), Positives = 61/156 (39%), Gaps = 13/156 (8%)
Frame = +1
Query: 10 YTGALFFDVAKAFDKVWHNGLIFKLFNMGVPG*SRCSSYGTSCRTALFDIESREPAPPHD 189
Y F D+ +AFD+VWH GL++K + P RT ++ +
Sbjct: 381 YAVGAFLDIQQAFDRVWHPGLLYKAKRLFPPQLYLVVKSFLEERTFHVSVDGYK------ 434
Query: 190 LSQLESRKALSSHPSYLAYSL-TIFPGSPPTH------------LALFADDTTVYYSSRN 330
S ++ A S L +L ++F PTH +A +ADDT V S++
Sbjct: 435 -SSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKS 493
Query: 331 KSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 438
LQ A QW W + IN K V F
Sbjct: 494 ILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTF 529
Score = 42.3 bits (95), Expect = 8e-04
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +3
Query: 117 LIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP 263
L+++ FL R+F V+G +SS +P+ AGVPQG +D+P
Sbjct: 415 LVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMP 463
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 40.3 bits (90), Expect = 0.003
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +1
Query: 10 YTGALFFDVAKAFDKVWHNGLIFKLFNM 93
Y ALF DVA+AFD+VW +GL+FK+ +
Sbjct: 114 YCTALFLDVAQAFDRVWLDGLMFKIIQL 141
Score = 29.5 bits (63), Expect = 5.8
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +3
Query: 120 IIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP 263
+++ +L R F R + SS + AGVPQG DIP
Sbjct: 149 LLKSYLDKRVFAVRCSSSTSSDFTIEAGVPQGSVLGPILYTLYTADIP 196
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 35.1 bits (77), Expect = 0.12
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +3
Query: 123 IRDFLSNRSFRYRVEGTRSSPRPLTAGVPQG 215
I++F+SNR RV SSP PL G+PQG
Sbjct: 606 IKNFMSNRKITVRVGPHTSSPLPLFNGIPQG 636
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 34.3 bits (75), Expect = 0.20
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 120 IIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQG 215
+I+ F++NRSFR R+ S+ L G+PQG
Sbjct: 613 LIKAFMTNRSFRVRINNVTSNSHILHNGIPQG 644
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,336,030
Number of Sequences: 53049
Number of extensions: 817862
Number of successful extensions: 2163
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2162
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3860063376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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