Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_M19
         (778 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0894 + 7047273-7048277,7049124-7049549                           34   0.14 
07_03_1231 + 25047067-25047262,25047876-25048045,25048897-250490...    28   7.2  
11_01_0489 + 3776563-3776692,3776995-3777073,3777532-3777840,377...    28   9.5  
03_05_1022 - 29756127-29756198,29756335-29756421,29756783-297569...    28   9.5  
01_06_1087 - 34430521-34430899,34432336-34432806,34432926-344331...    28   9.5  

>01_01_0894 + 7047273-7048277,7049124-7049549
          Length = 476

 Score = 33.9 bits (74), Expect = 0.14
 Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
 Frame = -3

Query: 635 GFRXPXPPSCCHERPTPFMVSHERFLGALTXRLVHPTA----PVLLTKIGPLGTVIRSPA 468
           G+R P PPS    R  PF+  H   LG+L  R +   A    PV+L   G + TV+ S A
Sbjct: 43  GWRLPLPPS---PRGVPFL-GHLPLLGSLPHRKLRSMAEAHGPVMLLWFGRVPTVVASSA 98

Query: 467 SSFE*AGVLTHLKFENRLR 411
           +S + A       F +R R
Sbjct: 99  ASAQEAMRARDAAFASRAR 117


>07_03_1231 +
           25047067-25047262,25047876-25048045,25048897-25049030,
           25049122-25049369,25049799-25049904,25049992-25050130,
           25050258-25050385,25050472-25050733
          Length = 460

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = -1

Query: 511 LPKLAHLAPSSDLRLHRSSKPEFSPI 434
           L  L +LAP  DLR+  SSKP F  I
Sbjct: 259 LETLVNLAPVLDLRIFSSSKPSFIKI 284


>11_01_0489 +
           3776563-3776692,3776995-3777073,3777532-3777840,
           3778828-3778898,3778975-3779213,3779306-3779383,
           3779734-3780156,3780416-3780661,3780886-3780978,
           3781480-3781527
          Length = 571

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 250 KSIVGTGYRGERLIEPSSSWFRPKFPSG 333
           + + GTG      + PSS+WF P+  SG
Sbjct: 12  RCVFGTGPLPPASLSPSSAWFDPELSSG 39


>03_05_1022 -
           29756127-29756198,29756335-29756421,29756783-29756968,
           29757088-29757188,29757379-29757484,29757564-29757638,
           29757772-29757903,29771476-29771655,29772032-29772234,
           29773296-29773602
          Length = 482

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -2

Query: 267 SSDDRFARQNRYGPPSGFXPDFDLTR 190
           S+ ++F ++ RY    GF PD DL R
Sbjct: 292 STKEKFLKKFRYAVSPGFDPDIDLER 317


>01_06_1087 -
           34430521-34430899,34432336-34432806,34432926-34433112,
           34433470-34433599,34433794-34434125,34434566-34435050,
           34435185-34435752,34436579-34436640,34437569-34437636
          Length = 893

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = -3

Query: 431 KFENRLRSFRPQCL*SFALPDETVLKFYIDASYPEGNF-GRNQLLDGSISLSPLY 270
           K E  LRSF       + LP     K+ I A++  GN+ GRN    GS  L  L+
Sbjct: 93  KQEETLRSFPDGQRNCYTLPTNRSKKYLIRATFTYGNYDGRNSSESGSPFLFGLH 147


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,257,625
Number of Sequences: 37544
Number of extensions: 439284
Number of successful extensions: 840
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)