Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_M18
(799 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 30 0.33
SPBC1709.03 |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.77
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 28 1.8
SPAC2E1P3.05c |||fungal cellulose binding domain protein|Schizos... 28 1.8
SPAC1071.02 |||TFIIH regulator |Schizosaccharomyces pombe|chr 1|... 27 3.1
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 27 3.1
SPBP35G2.05c |cki2||serine/threonine protein kinase Cki2|Schizos... 27 3.1
SPAC869.10c |||proline specific permease |Schizosaccharomyces po... 27 3.1
SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc... 27 4.1
SPAC23A1.09 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 27 4.1
SPBC2G5.06c |hmt2|cad1|sulfide-quinone oxidoreductase|Schizosacc... 26 5.4
SPBC2F12.02c |mrpl7||mitochondrial ribosomal protein subunit L7|... 26 5.4
SPCPB16A4.05c |||urease accessory protein UREG |Schizosaccharomy... 26 5.4
SPCC736.03c |||phenylalanyl-tRNA synthetase|Schizosaccharomyces ... 26 5.4
SPBC18H10.20c |||conserved fungal protein|Schizosaccharomyces po... 26 7.2
SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|... 26 7.2
SPAC5D6.07c |||PXA domain protein|Schizosaccharomyces pombe|chr ... 26 7.2
SPBC2D10.08c |||mitochondrial ribosomal protein subunit Yml6|Sch... 26 7.2
SPAC6F12.13c |fps1||geranyltranstransferase Fps1|Schizosaccharom... 25 9.5
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 9.5
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 9.5
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 30.3 bits (65), Expect = 0.33
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Frame = -2
Query: 462 TPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAITNITAPT 283
+PS+ LS + + + T++ S K T A P+N T IT+PT
Sbjct: 320 SPSVALSTSSTTTITNASTPAANTIISRSSKPTDTTNS---ISFANTTPENTSTQITSPT 376
Query: 282 TMKIHGP-TARWVFSKS--LTMVQFIRNATPIPTSSRPRSAT 166
+ P T+ V + S +T + +TPI +SS S+T
Sbjct: 377 AVNSSTPITSSSVLNSSTPITSSSILNTSTPITSSSVLNSST 418
>SPBC1709.03 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 398
Score = 29.1 bits (62), Expect = 0.77
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +2
Query: 545 ECCGNTGAINYGQFTLPESCCVKKSILSTFAGNNCTVDAANPGC 676
+C G+ YGQ C S++S AG N T+ A C
Sbjct: 302 DCSGHGRCSKYGQLDSCYVCQCSNSVVSNAAGQNKTIRWAGESC 345
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 27.9 bits (59), Expect = 1.8
Identities = 21/68 (30%), Positives = 27/68 (39%)
Frame = +3
Query: 480 RDPTLTQTRPPRLSSLNCNDSSNAAVTLALSTTXSSRCPSPVASRKASSLPSPATTARST 659
R TLT SS+ SSN +T L++ S S S+LPS AR
Sbjct: 290 RPSTLTSLFNAFFSSMPDRPSSNEPMTSNLTSNSGSMTNSTSTDLPTSNLPSQNAPARPV 349
Query: 660 PRIPAAVP 683
P+ P
Sbjct: 350 EPSPSIQP 357
>SPAC2E1P3.05c |||fungal cellulose binding domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 197
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +3
Query: 471 YSKRDPTLTQTRPPRLSSLNCNDSSNAAVTLALSTTXSSRCPSPVASRKASSLPSPATTA 650
YS+ P S+ + S+ ++ +L STT +S PS V+S +S+PS ++T
Sbjct: 100 YSQCIPVDIDPSSSSSSAASSTTSTTSSSSLVSSTTLTSSSPSAVSS--TTSIPSISSTI 157
Query: 651 RST 659
S+
Sbjct: 158 SSS 160
>SPAC1071.02 |||TFIIH regulator |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1018
Score = 27.1 bits (57), Expect = 3.1
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 443 ESIMDGVGVLFKKRSDANADEAAEAVFSELQRQ-FECC 553
ESI+ + V FK+R+D N E F EL +Q F C
Sbjct: 588 ESIVQSLSVAFKERNDRNEQE-IPFFFEELLKQLFTLC 624
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 27.1 bits (57), Expect = 3.1
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +3
Query: 474 SKRDPTLTQTRPPR--LSSLNCNDS-SNAAVTLALSTTXSSRCPSPVASRKASSLPSPAT 644
+K + + T T+ PR S+ N N S +N A T ST ++ P+ ++ ++S SPA
Sbjct: 219 AKPEASSTATKGPRPTTSASNTNTSPANGAPTNKPSTDINTTDPATQTTQVSAS-NSPAL 277
Query: 645 TARSTP 662
+ STP
Sbjct: 278 SGSSTP 283
>SPBP35G2.05c |cki2||serine/threonine protein kinase
Cki2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 27.1 bits (57), Expect = 3.1
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 7/97 (7%)
Frame = -2
Query: 408 LITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAITNITAPTTMKIHGPTAR---WVFSK 238
L C + K +A +T Q LSR+ H KN + P I P++R V+
Sbjct: 95 LFEWCGRRFSVKTVA-MTAKQMLSRVQTIHEKNLVYRDIKPDNFLIGRPSSRNANMVYMV 153
Query: 237 SLTMVQFIRNATP---IPTSSRPR-SATTRLKKNSTY 139
M ++ R+ IP S R S T R +T+
Sbjct: 154 DFGMAKYYRDPKTKQHIPYSERKSLSGTARYMSINTH 190
>SPAC869.10c |||proline specific permease |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 552
Score = 27.1 bits (57), Expect = 3.1
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 590 LPESCCVKKSILSTFAGNNCTVDAANPGCGPKIGELYXKWNKPIXGVALXV--ACV 751
L +C S L FAG+ A PKI + +W P+ VA+ V AC+
Sbjct: 342 LTSACSSGNSFL--FAGSRSIYSLAKEHQAPKIFKYCNRWGVPVISVAVTVLFACL 395
>SPAC6B12.05c |||chromatin remodeling complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 295
Score = 26.6 bits (56), Expect = 4.1
Identities = 18/82 (21%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = -1
Query: 496 VSVGSLFE*HADAIHNALLDALAVGEEEDADHHLHNDD-HQQEDCVRDDHAVTLAYRSTA 320
+SV + E DA+ A + +V +E++ + L DD + +ED + D+ + +
Sbjct: 26 LSVSTKEELGDDAL--AAEEGQSVLDEQEIEEALEEDDTNYEEDIIDDEESAQVDEEELE 83
Query: 319 SQERDHEHYSPDDYEDPRTDSK 254
+E + E +P+ + +S+
Sbjct: 84 EEEEEEEDATPEPVVTSKKNSR 105
>SPAC23A1.09 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 121
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 124 NEFCEICAILLQPGRRAPRPAASGDWSSVPDELDHGQR 237
+E E+ L+P RAPRP+ S S E+ H R
Sbjct: 77 DEKLEVDFAFLEPPERAPRPSISTRSRSQSPEVQHRDR 114
>SPBC2G5.06c |hmt2|cad1|sulfide-quinone
oxidoreductase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 459
Score = 26.2 bits (55), Expect = 5.4
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 555 VTLALSTTXSSRCPSPVASRKASSLPSPATTARSTPRIPAAV 680
V + STT S++ P+ A S LP+ T A T + P V
Sbjct: 320 VAVDQSTTQSTKFPNVFAIGDCSGLPTSKTYAAITAQAPVMV 361
>SPBC2F12.02c |mrpl7||mitochondrial ribosomal protein subunit
L7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 287
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -1
Query: 457 IHNALL-DALAVGEEEDADHHLHNDDHQQED 368
+H+ +L D LA D D L D+H Q+D
Sbjct: 56 LHDTILPDVLAASYRHDIDTALSTDEHTQKD 86
>SPCPB16A4.05c |||urease accessory protein UREG |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 286
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -1
Query: 424 GEEEDADHHLHNDDHQQEDCVRDDH 350
G ++ HH H+ DH D DH
Sbjct: 10 GSDDSTHHHTHDYDHHNHDHHGHDH 34
>SPCC736.03c |||phenylalanyl-tRNA synthetase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 429
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 274 LHSRRGCNVRDRVLGMLWSDTRESLHGRHVRNLLAGDHH 390
L SRR N + +V WS+ E +H + RNL + H
Sbjct: 12 LFSRRFPNWKRKVQTDSWSNVPEHIHSKIGRNLFQKEGH 50
>SPBC18H10.20c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 361
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 336 RIAPQHPKNAITNITAPTTMKIHG 265
RI P P N + NIT P+T+ HG
Sbjct: 175 RIFP--PTNLVANITLPSTLHPHG 196
>SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 732
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = -1
Query: 415 EDADHHLHNDDHQQEDCVRDDHAVTLAYRSTASQERDHEHYSPDDY 278
E+ + N + Q+ DDH + SQE HEH D+
Sbjct: 505 EEFEEEKDNVEAQKMGYTNDDHVSQHEHTHENSQEHHHEHNHNHDH 550
>SPAC5D6.07c |||PXA domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 495
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 531 CNDSSNAAVTLALSTTXSSRCPSPVASRKASSLPSPATTARSTP 662
C +++ A++ ST S SP++SR +L S +A S+P
Sbjct: 363 CETNASVALSTVTSTPVFSTDSSPLSSRTRENLLSLIPSAVSSP 406
>SPBC2D10.08c |||mitochondrial ribosomal protein subunit
Yml6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 261
Score = 25.8 bits (54), Expect = 7.2
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -2
Query: 237 SLTMVQFIRNATPIPTSSRPRSATTRLKKNSTYFTKLVPHPML 109
SL + +F + T + +P S T + NS+ FTK P P L
Sbjct: 218 SLIVEKFAQRNT-LSDMDQPASLTAYVDANSSSFTKSKPEPSL 259
>SPAC6F12.13c |fps1||geranyltranstransferase
Fps1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 347
Score = 25.4 bits (53), Expect = 9.5
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = +2
Query: 482 RSDANADEAAEAVFSEL--QRQFECCGNTGAINYGQFT--LPESCCVKKSILSTFAG 640
R D+ +++ +AVF EL + +FE + + + ES +KKSI +TF G
Sbjct: 284 RKDSESEKRVKAVFEELNIRGEFENYEESEVSEIKKLIDGVDESTGLKKSIFTTFLG 340
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +3
Query: 519 SSLNCNDSSNAAVTLALSTTXSSRCPSPVASRKASSLPSPATTARS 656
SSL + ++++++T + S SS + AS +SSL S + T+ S
Sbjct: 73 SSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSS 118
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.4 bits (53), Expect = 9.5
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +3
Query: 486 PTLTQTRPPRLSSLNCNDSSN---AAVTLALSTTXSSRCPSPVASRKASSLPSPATTARS 656
PT + T SS+ SS AA LS+ +S + +S ASS S ATTA S
Sbjct: 1091 PTSSVTAVSSTSSVEGTASSTIAAAASAATLSSDAASGSSTVTSSATASSSSSAATTADS 1150
Query: 657 T 659
+
Sbjct: 1151 S 1151
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,794,058
Number of Sequences: 5004
Number of extensions: 54264
Number of successful extensions: 231
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 230
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 389395636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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