Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_M06
(836 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 214 6e-56
U39745-7|AAA80449.1| 612|Caenorhabditis elegans Uncoordinated p... 127 8e-30
M80241-1|AAA28157.1| 612|Caenorhabditis elegans unc-6 protein. 127 8e-30
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 82 4e-16
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 82 4e-16
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 82 4e-16
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 72 6e-13
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 72 6e-13
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 72 6e-13
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 72 6e-13
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 67 2e-11
AC024809-10|AAF59547.1| 272|Caenorhabditis elegans Hypothetical... 34 0.14
U88314-7|AAF99887.2| 294|Caenorhabditis elegans Pharyngeal glan... 31 1.0
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ... 30 1.8
Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical pr... 29 5.4
AF098996-3|AAC68707.2| 349|Caenorhabditis elegans Serpentine re... 29 5.4
AF036702-8|AAR85905.1| 377|Caenorhabditis elegans Hypothetical ... 29 5.4
AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like prot... 29 5.4
Z82055-7|CAB04849.1| 387|Caenorhabditis elegans Hypothetical pr... 28 9.5
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 214 bits (523), Expect = 6e-56
Identities = 105/213 (49%), Positives = 141/213 (66%), Gaps = 6/213 (2%)
Frame = +3
Query: 144 GSKRASCY-KSDGKPQRCIPEFENAAYLVQMEATNTCGDNGVKLYCIQTSAGTSTRS-CD 317
G+ CY ++ +PQRC+P+F NAA+ ++++ TNTCG +C+Q S T RS C+
Sbjct: 19 GADGNPCYDRATRQPQRCVPDFVNAAFNLEVQVTNTCGTKRPTKFCVQ-SGHTGQRSVCE 77
Query: 318 YCQPGQ--FS--SYYLTDLHHEQDNQTWWQSETMKEGIQYPNQVNLTLHLGKAYDITYVR 485
C FS + YLTD + +N+TWWQS+TM+EG QYP NLTL LGK++DITYVR
Sbjct: 78 TCDDRHEGFSHPAKYLTDFN-VGNNETWWQSDTMQEGQQYPTTTNLTLVLGKSFDITYVR 136
Query: 486 IVFYSPRPQSFAIYKKTNEDXVWEPFQYFSASCRETYGVEEQKSAELGAETXALCTSEYS 665
+ F SPRP+SF IYKKT+ D WEP+Q++S SCR TYG+ ++ G E A CT E+S
Sbjct: 137 LKFISPRPESFTIYKKTHTDSEWEPWQFYSGSCRATYGLSDRAPILPGNEATAQCTKEFS 196
Query: 666 DISPLSGXNVPXSTLXGXPSAXTFXSSPELKDW 764
DISP++G N+ STL G PSA F S L+ W
Sbjct: 197 DISPITGGNIAFSTLEGRPSAHAFEESEVLQKW 229
>U39745-7|AAA80449.1| 612|Caenorhabditis elegans Uncoordinated
protein 6 protein.
Length = 612
Score = 127 bits (307), Expect = 8e-30
Identities = 77/207 (37%), Positives = 102/207 (49%), Gaps = 6/207 (2%)
Frame = +3
Query: 162 CYKSDGKPQRCIPEFENAAYLVQMEATNTCGDNGVKLYCIQTSA--GTSTRSCDYCQP-G 332
C+ G+P RC+PEF NAA+ + A++TCG N YC G CD C
Sbjct: 37 CHDHTGRPVRCVPEFINAAFGKPVIASDTCGTNRPDKYCTVKEGPDGIIREQCDTCDARN 96
Query: 333 QFSSY---YLTDLHHEQDNQTWWQSETMKEGIQYPNQVNLTLHLGKAYDITYVRIVFYSP 503
F S+ LTDL+ N T W S P V+LTL LGK +++TYV + F S
Sbjct: 97 HFQSHPASLLTDLN-SIGNMTCWVSTPSLS----PQNVSLTLSLGKKFELTYVSMHFCSR 151
Query: 504 RPQSFAIYKKTNEDXVWEPFQYFSASCRETYGVEEQKSAELGAETXALCTSEYSDISPLS 683
P S A+YK + W PFQ++S+ CR +G + S E A+CT+ S I
Sbjct: 152 LPDSMALYKSADFGKTWTPFQFYSSECRRIFGRDPDVSITKSNEQEAVCTA--SHIMGPG 209
Query: 684 GXNVPXSTLXGXPSAXTFXSSPELKDW 764
G V L PSA F +SP L+DW
Sbjct: 210 GNRVAFPFLENRPSAQNFENSPVLQDW 236
>M80241-1|AAA28157.1| 612|Caenorhabditis elegans unc-6 protein.
Length = 612
Score = 127 bits (307), Expect = 8e-30
Identities = 77/207 (37%), Positives = 102/207 (49%), Gaps = 6/207 (2%)
Frame = +3
Query: 162 CYKSDGKPQRCIPEFENAAYLVQMEATNTCGDNGVKLYCIQTSA--GTSTRSCDYCQP-G 332
C+ G+P RC+PEF NAA+ + A++TCG N YC G CD C
Sbjct: 37 CHDHTGRPVRCVPEFINAAFGKPVIASDTCGTNRPDKYCTVKEGPDGIIREQCDTCDARN 96
Query: 333 QFSSY---YLTDLHHEQDNQTWWQSETMKEGIQYPNQVNLTLHLGKAYDITYVRIVFYSP 503
F S+ LTDL+ N T W S P V+LTL LGK +++TYV + F S
Sbjct: 97 HFQSHPASLLTDLN-SIGNMTCWVSTPSLS----PQNVSLTLSLGKKFELTYVSMHFCSR 151
Query: 504 RPQSFAIYKKTNEDXVWEPFQYFSASCRETYGVEEQKSAELGAETXALCTSEYSDISPLS 683
P S A+YK + W PFQ++S+ CR +G + S E A+CT+ S I
Sbjct: 152 LPDSMALYKSADFGKTWTPFQFYSSECRRIFGRDPDVSITKSNEQEAVCTA--SHIMGPG 209
Query: 684 GXNVPXSTLXGXPSAXTFXSSPELKDW 764
G V L PSA F +SP L+DW
Sbjct: 210 GNRVAFPFLENRPSAQNFENSPVLQDW 236
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 82.2 bits (194), Expect = 4e-16
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 12/189 (6%)
Frame = +3
Query: 198 PEFENAAYLVQMEATNTCGDNGVKLYC-------IQTSAGTSTRSCDYCQPGQFSSYYLT 356
P N A + AT+TCG + YC ++ + T + CD C +
Sbjct: 50 PNIFNLATNSLITATDTCGQYTAEEYCKLVEHVLLRKTTNTQSPQCDICDANNVHKRHPI 109
Query: 357 DLHHEQDNQTWWQSETMKEGIQYPNQVNLTLHLGKAYDITYVRIVF-YSPRPQSFAIYKK 533
+ + + WWQS ++ G+++ +VN+T+ L + Y + Y+ + SPRP ++ + +K
Sbjct: 110 E-YAIDGTRRWWQSPSLANGLRF-EKVNITIDLRQEYQVAYIILKMGNSPRPGTWVL-EK 166
Query: 534 TNEDXVWEPFQYFS---ASCRETYGVEEQKSA-ELGAETXALCTSEYSDISPLSGXNVPX 701
+ + +EP+QY++ A C +G+ E CTSEYS I+PL +
Sbjct: 167 SLDGEYYEPWQYYAMQDAECMRQFGIPATTGVPRFQKEDEVHCTSEYSKITPLENGEIHT 226
Query: 702 STLXGXPSA 728
S + G P A
Sbjct: 227 SLVNGRPGA 235
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 82.2 bits (194), Expect = 4e-16
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 12/189 (6%)
Frame = +3
Query: 198 PEFENAAYLVQMEATNTCGDNGVKLYC-------IQTSAGTSTRSCDYCQPGQFSSYYLT 356
P N A + AT+TCG + YC ++ + T + CD C +
Sbjct: 50 PNIFNLATNSLITATDTCGQYTAEEYCKLVEHVLLRKTTNTQSPQCDICDANNVHKRHPI 109
Query: 357 DLHHEQDNQTWWQSETMKEGIQYPNQVNLTLHLGKAYDITYVRIVF-YSPRPQSFAIYKK 533
+ + + WWQS ++ G+++ +VN+T+ L + Y + Y+ + SPRP ++ + +K
Sbjct: 110 E-YAIDGTRRWWQSPSLANGLRF-EKVNITIDLRQEYQVAYIILKMGNSPRPGTWVL-EK 166
Query: 534 TNEDXVWEPFQYFS---ASCRETYGVEEQKSA-ELGAETXALCTSEYSDISPLSGXNVPX 701
+ + +EP+QY++ A C +G+ E CTSEYS I+PL +
Sbjct: 167 SLDGEYYEPWQYYAMQDAECMRQFGIPATTGVPRFQKEDEVHCTSEYSKITPLENGEIHT 226
Query: 702 STLXGXPSA 728
S + G P A
Sbjct: 227 SLVNGRPGA 235
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 82.2 bits (194), Expect = 4e-16
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 12/189 (6%)
Frame = +3
Query: 198 PEFENAAYLVQMEATNTCGDNGVKLYC-------IQTSAGTSTRSCDYCQPGQFSSYYLT 356
P N A + AT+TCG + YC ++ + T + CD C +
Sbjct: 50 PNIFNLATNSLITATDTCGQYTAEEYCKLVEHVLLRKTTNTQSPQCDICDANNVHKRHPI 109
Query: 357 DLHHEQDNQTWWQSETMKEGIQYPNQVNLTLHLGKAYDITYVRIVF-YSPRPQSFAIYKK 533
+ + + WWQS ++ G+++ +VN+T+ L + Y + Y+ + SPRP ++ + +K
Sbjct: 110 E-YAIDGTRRWWQSPSLANGLRF-EKVNITIDLRQEYQVAYIILKMGNSPRPGTWVL-EK 166
Query: 534 TNEDXVWEPFQYFS---ASCRETYGVEEQKSA-ELGAETXALCTSEYSDISPLSGXNVPX 701
+ + +EP+QY++ A C +G+ E CTSEYS I+PL +
Sbjct: 167 SLDGEYYEPWQYYAMQDAECMRQFGIPATTGVPRFQKEDEVHCTSEYSKITPLENGEIHT 226
Query: 702 STLXGXPSA 728
S + G P A
Sbjct: 227 SLVNGRPGA 235
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical
protein K08C7.3b protein.
Length = 3672
Score = 71.7 bits (168), Expect = 6e-13
Identities = 40/161 (24%), Positives = 80/161 (49%), Gaps = 4/161 (2%)
Frame = +3
Query: 312 CDYCQPGQFSSYYLTDLHHEQDNQTWWQSETMKEGIQYPNQVNLTLHLGKAYDITYVRI- 488
C +C G +S+ ++ N +WW S + G+Q+ N+VN+T+ L + + + YV I
Sbjct: 101 CGHCNAGNENSHPAANM--VDGNNSWWMSPPLSRGLQH-NEVNITIDLEQEFHVAYVWIQ 157
Query: 489 VFYSPRPQSFAIYKKTNEDXVWEPFQYF---SASCRETYGVEEQKSAELGAETXALCTSE 659
+ SPRP S+ + + T+ ++P+ F +A C +G+E + + + C ++
Sbjct: 158 MANSPRPGSWVLERSTDHGKTYQPWFNFAENAAECMRRFGME--SLSPISEDDSVTCRTD 215
Query: 660 YSDISPLSGXNVPXSTLXGXPSAXTFXSSPELKDWGXGKNL 782
+ + PL + L PS+ F +S L+++ N+
Sbjct: 216 MASLQPLENAEMVIRILEHRPSSRQFATSEALQNFTRATNV 256
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical
protein K08C7.3a protein.
Length = 3704
Score = 71.7 bits (168), Expect = 6e-13
Identities = 40/161 (24%), Positives = 80/161 (49%), Gaps = 4/161 (2%)
Frame = +3
Query: 312 CDYCQPGQFSSYYLTDLHHEQDNQTWWQSETMKEGIQYPNQVNLTLHLGKAYDITYVRI- 488
C +C G +S+ ++ N +WW S + G+Q+ N+VN+T+ L + + + YV I
Sbjct: 101 CGHCNAGNENSHPAANM--VDGNNSWWMSPPLSRGLQH-NEVNITIDLEQEFHVAYVWIQ 157
Query: 489 VFYSPRPQSFAIYKKTNEDXVWEPFQYF---SASCRETYGVEEQKSAELGAETXALCTSE 659
+ SPRP S+ + + T+ ++P+ F +A C +G+E + + + C ++
Sbjct: 158 MANSPRPGSWVLERSTDHGKTYQPWFNFAENAAECMRRFGME--SLSPISEDDSVTCRTD 215
Query: 660 YSDISPLSGXNVPXSTLXGXPSAXTFXSSPELKDWGXGKNL 782
+ + PL + L PS+ F +S L+++ N+
Sbjct: 216 MASLQPLENAEMVIRILEHRPSSRQFATSEALQNFTRATNV 256
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 71.7 bits (168), Expect = 6e-13
Identities = 40/161 (24%), Positives = 80/161 (49%), Gaps = 4/161 (2%)
Frame = +3
Query: 312 CDYCQPGQFSSYYLTDLHHEQDNQTWWQSETMKEGIQYPNQVNLTLHLGKAYDITYVRI- 488
C +C G +S+ ++ N +WW S + G+Q+ N+VN+T+ L + + + YV I
Sbjct: 101 CGHCNAGNENSHPAANM--VDGNNSWWMSPPLSRGLQH-NEVNITIDLEQEFHVAYVWIQ 157
Query: 489 VFYSPRPQSFAIYKKTNEDXVWEPFQYF---SASCRETYGVEEQKSAELGAETXALCTSE 659
+ SPRP S+ + + T+ ++P+ F +A C +G+E + + + C ++
Sbjct: 158 MANSPRPGSWVLERSTDHGKTYQPWFNFAENAAECMRRFGME--SLSPISEDDSVTCRTD 215
Query: 660 YSDISPLSGXNVPXSTLXGXPSAXTFXSSPELKDWGXGKNL 782
+ + PL + L PS+ F +S L+++ N+
Sbjct: 216 MASLQPLENAEMVIRILEHRPSSRQFATSEALQNFTRATNV 256
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 71.7 bits (168), Expect = 6e-13
Identities = 40/161 (24%), Positives = 80/161 (49%), Gaps = 4/161 (2%)
Frame = +3
Query: 312 CDYCQPGQFSSYYLTDLHHEQDNQTWWQSETMKEGIQYPNQVNLTLHLGKAYDITYVRI- 488
C +C G +S+ ++ N +WW S + G+Q+ N+VN+T+ L + + + YV I
Sbjct: 101 CGHCNAGNENSHPAANM--VDGNNSWWMSPPLSRGLQH-NEVNITIDLEQEFHVAYVWIQ 157
Query: 489 VFYSPRPQSFAIYKKTNEDXVWEPFQYF---SASCRETYGVEEQKSAELGAETXALCTSE 659
+ SPRP S+ + + T+ ++P+ F +A C +G+E + + + C ++
Sbjct: 158 MANSPRPGSWVLERSTDHGKTYQPWFNFAENAAECMRRFGME--SLSPISEDDSVTCRTD 215
Query: 660 YSDISPLSGXNVPXSTLXGXPSAXTFXSSPELKDWGXGKNL 782
+ + PL + L PS+ F +S L+++ N+
Sbjct: 216 MASLQPLENAEMVIRILEHRPSSRQFATSEALQNFTRATNV 256
>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
see also lmb-protein 1 protein.
Length = 1067
Score = 66.9 bits (156), Expect = 2e-11
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 13/169 (7%)
Frame = +3
Query: 228 QMEATNTCGDNGVKLYCIQTSAGTSTRSCDYC----------QPGQFSSYYLTDLHHEQD 377
Q++AT+TCG G + +CI + T+ C YC +P + S + D
Sbjct: 51 QLKATSTCGSQGRQRFCIVSHLEEQTK-CFYCDSRTEWKPQREPYRLSHRIENVVTEVMD 109
Query: 378 --NQTWWQSETMKEGIQYPNQVNLTLHLGKAYDITYVRIVFYSPRPQSFAIYKKTNEDXV 551
N+ W+QSE G Q V+++ L + T++ + F S RP + I + +
Sbjct: 110 DKNRNWYQSEN---GAQ---NVSISFDLEAEFHFTHLIMTFKSFRPAAMIIERSADFGKT 163
Query: 552 WEPFQYFSASCRETY-GVEEQKSAELGAETXALCTSEYSDISPLSGXNV 695
W+ ++YF+ C ++ G+ E + T +CTS+YSD++P +G +
Sbjct: 164 WQVYRYFAYDCDSSFPGIPEGPPKK---HTDVICTSQYSDVAPSTGGEI 209
>AC024809-10|AAF59547.1| 272|Caenorhabditis elegans Hypothetical
protein Y53G8AR.1 protein.
Length = 272
Score = 33.9 bits (74), Expect = 0.14
Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 2/82 (2%)
Frame = +3
Query: 174 DGKPQRCIPEFENAAYLVQMEATNTCGD-NGVKLYCIQ-TSAGTSTRSCDYCQPGQFSSY 347
DG I E E E C D +GV +C + SCDY G + Y
Sbjct: 97 DGLLTEIIEESEEEMQKALNEKKTLCQDKDGVNGFCPDHINPEPKAVSCDYVCYGYCTKY 156
Query: 348 YLTDLHHEQDNQTWWQSETMKE 413
LT N WW+++T+ E
Sbjct: 157 DLTCYLTPTSNTAWWKNQTIGE 178
>U88314-7|AAF99887.2| 294|Caenorhabditis elegans Pharyngeal gland
toxin-relatedprotein 1 protein.
Length = 294
Score = 31.1 bits (67), Expect = 1.0
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Frame = -3
Query: 459 CPNV--RSNSLDWG-TGCLPSLSPTATKSGCPARGEGRLSNSWRTVLVDSSHRTL*TSQL 289
CP R NS T C+ ++P+ S CPAR +++ T++ RT
Sbjct: 121 CPRTCGRCNSTSTSSTSCVDRVNPSTGVSDCPARAALCNDSNYYTLMTTQCPRTCGRCST 180
Query: 288 MSVYSITLLRCLRRCWSPPSGPNKRRSRTLVCIFEVFHRI 169
S + + C R +P +G + +R +C V++ I
Sbjct: 181 SSSTTSSSTTCADRV-NPTTGVSDCPARASLCNNSVYYDI 219
>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
protein Y46B2A.3 protein.
Length = 1145
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 186 QRCIPEFENAAYLVQMEATNTCGDNGVKLYCIQTSAGTSTR 308
QRC + Y +Q+E NT G N + ++C S S R
Sbjct: 88 QRCPNKLRVIGYSLQIEPNNTAGANNIAVFCGDGSEPRSKR 128
>Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical protein
T06E4.3b protein.
Length = 2514
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 345 YYLTDLHHEQDNQTWWQSETMKEGIQYPNQVNLT-LHLGKAYDITYVRIVFYS 500
+ LT +H E+D+ T W T +E + N LT G A + YV YS
Sbjct: 1399 FILTVIHMERDSVTQWILSTFEEALTNTNHRRLTNSDRGPASFVFYVFDFIYS 1451
>Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical protein
T06E4.3a protein.
Length = 2531
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 345 YYLTDLHHEQDNQTWWQSETMKEGIQYPNQVNLT-LHLGKAYDITYVRIVFYS 500
+ LT +H E+D+ T W T +E + N LT G A + YV YS
Sbjct: 1399 FILTVIHMERDSVTQWILSTFEEALTNTNHRRLTNSDRGPASFVFYVFDFIYS 1451
>AF098996-3|AAC68707.2| 349|Caenorhabditis elegans Serpentine
receptor, class w protein79 protein.
Length = 349
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/32 (40%), Positives = 23/32 (71%), Gaps = 3/32 (9%)
Frame = +3
Query: 42 STRSDKMARP---LIYTYLLSILSVAVAQNYY 128
S R+DK+ARP + T+++S++S A++ YY
Sbjct: 129 SGRADKLARPSSGYLITFIISVISAALSGWYY 160
>AF036702-8|AAR85905.1| 377|Caenorhabditis elegans Hypothetical
protein F33D4.5 protein.
Length = 377
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 496 IRLDLKVLLFTRRQTKTKFGSHSNISVPH 582
IRL L++ + T RQTK GS + VPH
Sbjct: 137 IRLRLELNMTTERQTKMVTGSDEIVPVPH 165
>AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like protein
protein.
Length = 2514
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 345 YYLTDLHHEQDNQTWWQSETMKEGIQYPNQVNLT-LHLGKAYDITYVRIVFYS 500
+ LT +H E+D+ T W T +E + N LT G A + YV YS
Sbjct: 1399 FILTVIHMERDSVTQWILSTFEEALTNTNHRRLTNSDRGPASFVFYVFDFIYS 1451
>Z82055-7|CAB04849.1| 387|Caenorhabditis elegans Hypothetical
protein T26H2.8 protein.
Length = 387
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 41 LHALRQNGAAAHLHIFAQYLE-RSRGSELL 127
+HAL QN A H+F + LE S+ ELL
Sbjct: 190 IHALIQNAIAREFHVFNEELEGASKNKELL 219
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,652,175
Number of Sequences: 27780
Number of extensions: 392780
Number of successful extensions: 1046
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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