Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_M03
         (843 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160...    46   5e-05
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164...    46   5e-05
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171...    46   5e-05
10_01_0266 + 2816391-2818898,2818934-2819162,2819369-2819444,281...    28   8.1  

>12_01_0211 -
           1601129-1601272,1601670-1602062,1602142-1602240,
           1602920-1602988,1603071-1603328
          Length = 320

 Score = 45.6 bits (103), Expect = 5e-05
 Identities = 23/42 (54%), Positives = 27/42 (64%)
 Frame = +1

Query: 106 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIR 231
           +  KA  K  Y  K+ QLLDEY K  I  ADNVGS Q+Q+IR
Sbjct: 4   KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIR 45


>11_01_0210 -
           1647922-1648065,1648459-1648851,1648930-1649028,
           1649706-1649774,1649877-1650134
          Length = 320

 Score = 45.6 bits (103), Expect = 5e-05
 Identities = 23/42 (54%), Positives = 27/42 (64%)
 Frame = +1

Query: 106 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIR 231
           +  KA  K  Y  K+ QLLDEY K  I  ADNVGS Q+Q+IR
Sbjct: 4   KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIR 45


>08_01_0215 -
           1714224-1714364,1714795-1715187,1715279-1715377,
           1716248-1716316,1716408-1716665
          Length = 319

 Score = 45.6 bits (103), Expect = 5e-05
 Identities = 23/42 (54%), Positives = 27/42 (64%)
 Frame = +1

Query: 106 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIR 231
           +  KA  K  Y  K+ QLLDEY K  I  ADNVGS Q+Q+IR
Sbjct: 4   KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIR 45


>10_01_0266 +
           2816391-2818898,2818934-2819162,2819369-2819444,
           2819776-2819830,2822042-2822110,2823077-2823321,
           2824029-2824065
          Length = 1072

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = +1

Query: 31  PHESRAF---CLVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPK 177
           PH S A    CL L+F      T  R  R  K T K   +  II++L+ YP+
Sbjct: 802 PHASSADIDKCLFLEFLMLMTCTTIRNSRSFKFTHKKFGYWMIIEMLNSYPR 853


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,822,583
Number of Sequences: 37544
Number of extensions: 159524
Number of successful extensions: 335
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 335
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)