Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_L20
(822 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 62 6e-12
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 60 2e-11
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 60 2e-11
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 60 2e-11
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 60 3e-11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 59 4e-11
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 59 6e-11
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 59 6e-11
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 57 2e-10
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 56 3e-10
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 56 4e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 54 2e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 53 3e-09
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 52 6e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 52 6e-09
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 49 6e-08
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 42 9e-06
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 42 9e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 40 3e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 38 1e-04
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 38 1e-04
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 38 1e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 1e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 36 3e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 36 6e-04
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 27 0.16
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 27 0.16
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 27 0.28
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 27 0.28
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 27 0.28
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 27 0.28
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 24 1.5
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 62.1 bits (144), Expect = 6e-12
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Frame = +3
Query: 267 QIFNWMN--WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRA 428
++ +WM W D LSW ++ G + V S+ +W PD+ + N+ T G
Sbjct: 90 ELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTC 149
Query: 429 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEMDFVIDKRIYSM 605
V ++GSVS + + + +WP D C FGS +H +E++ +DK+ + M
Sbjct: 150 LVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 60.5 bits (140), Expect = 2e-11
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Frame = +3
Query: 282 MNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVS 455
+ W+D L WN E+G L ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 109 LEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCL 168
Query: 456 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEMDFVI 584
++ + + + +P D Q C KFGS + +++D V+
Sbjct: 169 YVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 60.5 bits (140), Expect = 2e-11
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Frame = +3
Query: 282 MNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVS 455
+ W+D L WN E+G L ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 109 LEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCL 168
Query: 456 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEMDFVI 584
++ + + + +P D Q C KFGS + +++D V+
Sbjct: 169 YVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 60.1 bits (139), Expect = 2e-11
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Frame = +3
Query: 282 MNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVS 455
+ W+D L WN E+G L ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 41 LEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCL 100
Query: 456 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEMDFVI 584
++ + + + +P D Q C KFGS + +++D V+
Sbjct: 101 YVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 59.7 bits (138), Expect = 3e-11
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Frame = +3
Query: 285 NWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSW 458
+W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G V W
Sbjct: 80 SWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 139
Query: 459 IKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEMD 575
+ + ++ +P D QTC KFGS + ++D
Sbjct: 140 KPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 59.3 bits (137), Expect = 4e-11
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Frame = +3
Query: 282 MNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVS 455
+ W+D L WN E+G L ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 41 LEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCL 100
Query: 456 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEMDFVI 584
++ + M + +P D Q C KFGS + +++D V+
Sbjct: 101 YVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 58.8 bits (136), Expect = 6e-11
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Frame = +3
Query: 282 MNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVS 455
+ W+D L WN E+G L ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 41 LEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCL 100
Query: 456 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEMDFVI 584
++ + M + +P D Q C KFGS + +++D V+
Sbjct: 101 YVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.8 bits (136), Expect = 6e-11
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +3
Query: 285 NWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSW 458
+W D +L W E+G L V S+ +WRPD+VL N A A +A + + G V W
Sbjct: 84 SWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
Query: 459 IKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEMD 575
+ + ++ +P D QTC KFGS + ++D
Sbjct: 144 KPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 58.0 bits (134), Expect = 1e-10
Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Frame = +3
Query: 282 MNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVS 455
+ W+D L WN E+G L ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 41 LEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCL 100
Query: 456 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEMDFVI 584
++ + + + +P D Q C KFGS + +++D V+
Sbjct: 101 YVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 57.6 bits (133), Expect = 1e-10
Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Frame = +3
Query: 282 MNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVS 455
+ W+D L WN E+G L ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 41 LEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCL 100
Query: 456 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEMDFVI 584
++ + + + +P D Q C KFGS + +++D V+
Sbjct: 101 YVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 57.6 bits (133), Expect = 1e-10
Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Frame = +3
Query: 282 MNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVS 455
+ W+D L WN E+G L ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 41 LEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCL 100
Query: 456 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEMDFVI 584
++ + + + +P D Q C KFGS + +++D V+
Sbjct: 101 YVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 57.2 bits (132), Expect = 2e-10
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Frame = +3
Query: 288 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSV 452
W D +L WN E+G L V SE +W PD+VL N A G+Y + +A + G V
Sbjct: 90 WNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDV 146
Query: 453 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEMD 575
SW + + ++ +P D Q+C KFGS + ++D
Sbjct: 147 SWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 56.8 bits (131), Expect = 2e-10
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Frame = +3
Query: 288 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSV 452
W D +L W+ ++G + +++W+PD+VL N A G+Y +R + + NG V
Sbjct: 83 WTDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDV 139
Query: 453 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEMDFVI 584
W+ + ++ + +P D QTC KFGS D++ +
Sbjct: 140 LWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLAL 183
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 56.4 bits (130), Expect = 3e-10
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Frame = +3
Query: 285 NWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGS 449
+W D +L W E+G L V S+ +WRPD+VL N A G+Y + +A V +G
Sbjct: 84 SWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGL 140
Query: 450 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEMD 575
V W + S+ ++ +P D+QTC K GS + ++D
Sbjct: 141 VVWQPPAVYKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 56.0 bits (129), Expect = 4e-10
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = +3
Query: 288 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSWI 461
W D + W+ E+G T L V SE +W PD+VL N A G + +A + G V W
Sbjct: 77 WQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWT 136
Query: 462 KRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEMD 575
+ + + +P D QTC KFGS + ++D
Sbjct: 137 PPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 54.0 bits (124), Expect = 2e-09
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = +3
Query: 282 MNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVS 455
+ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 78 LEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCL 137
Query: 456 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEMD 575
++ + + + +P D Q C KFGS + ++D
Sbjct: 138 YVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLD 177
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 53.2 bits (122), Expect = 3e-09
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Frame = +3
Query: 288 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSV 452
W D +L WN ++G T V SE +W PD+VL N A G+Y + +A + + G V
Sbjct: 77 WNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKV 133
Query: 453 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 548
W + + ++ +P D QTC KFGS
Sbjct: 134 VWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 52.0 bits (119), Expect = 6e-09
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Frame = +3
Query: 246 SPPCEYRQIFNWMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDY 416
S C +RQ +W+D+RL++ G+ + + R+W+PD N + T
Sbjct: 52 SMDCYFRQ-----SWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSP 106
Query: 417 ALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 548
R+ +G V + RL I M L+N+P D Q C +FGS
Sbjct: 107 NKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 52.0 bits (119), Expect = 6e-09
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Frame = +3
Query: 288 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGDYALRARV--SNNGSVSW 458
W D L WNA E+ G V R+WRPD +L N A + V S+ G V W
Sbjct: 62 WTDHHLKWNASEFAGIRVIRVPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVW 121
Query: 459 IKRLDISTPISMQLDNWPNDMQTCTFKFGS 548
+ + + ++ +P D Q C K+ S
Sbjct: 122 LSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 48.8 bits (111), Expect = 6e-08
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Frame = +3
Query: 246 SPPCEYRQIFNWMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR 425
S C +RQ +W D RLS+ S + ER+WRPD N + +
Sbjct: 84 SMDCYFRQ-----SWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVP 138
Query: 426 ---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 548
R+S +G + + RL I M+L N+P D Q+C GS
Sbjct: 139 NKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.5 bits (93), Expect = 9e-06
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Frame = +3
Query: 288 WIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSV 452
W+D+RL +N G T L + R+W PD+ N + + R+ NGSV
Sbjct: 90 WLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSV 148
Query: 453 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEMDFV 581
+ R+ ++ M L +P D Q C+ + S +D++ F+
Sbjct: 149 LYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.5 bits (93), Expect = 9e-06
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Frame = +3
Query: 288 WIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSV 452
W+D+RL +N G T L + R+W PD+ N + + R+ NGSV
Sbjct: 90 WLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSV 148
Query: 453 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEMDFV 581
+ R+ ++ M L +P D Q C+ + S +D++ F+
Sbjct: 149 LYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 39.9 bits (89), Expect = 3e-05
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +3
Query: 288 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSW 458
W D+RL+++ E + +E++W PD N + D R R+S +GSV++
Sbjct: 92 WKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTY 151
Query: 459 IKRLDISTPISMQLDNWPNDMQTCTFKFGS 548
R + M L +P D Q CT + S
Sbjct: 152 GMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.5 bits (83), Expect = 1e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +3
Query: 288 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 440
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 441 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 548
+GS++ RL I+ M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.5 bits (83), Expect = 1e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +3
Query: 288 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 440
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 441 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 548
+GS++ RL I+ M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 37.5 bits (83), Expect = 1e-04
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Frame = +3
Query: 288 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGDY---ALRARVSNNGSVS 455
W L+W + E+ ++ V S +W PD+V+ ++ + D ++ V N+G++
Sbjct: 90 WEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM-HSVTSVGIDLEMPSVECIVFNSGTIL 148
Query: 456 WIKRLDISTPISMQLDN--WPNDMQTCTFKFGSRMHXSDEM 572
+ TP+ + D+ WP D+ CT S H S+E+
Sbjct: 149 CVP-FTTYTPVC-EYDHTWWPYDILNCTIHIASWSHGSNEI 187
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.5 bits (83), Expect = 1e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +3
Query: 288 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 440
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 441 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 548
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 36.3 bits (80), Expect = 3e-04
Identities = 16/77 (20%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +3
Query: 360 LWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 530
+WRPD NA T + ++ + ++ ++ ++ +L + +M+ +++P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 531 TFKFGSRMHXSDEMDFV 581
+ S H + ++ F+
Sbjct: 147 SMMIESLSHTTQDLVFI 163
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 35.5 bits (78), Expect = 6e-04
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +3
Query: 354 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 524
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 525 TCTFKFGSRMHXSDEMDFVID 587
C + S H +DEM F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.5 bits (58), Expect = 0.16
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +3
Query: 354 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPND 518
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 519 MQTC 530
+Q C
Sbjct: 127 IQIC 130
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 27.5 bits (58), Expect = 0.16
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 341 PSAAAPLPCVPTQSFVDPIHPVEDLP 264
PSA AP+P +P S + + P+ ++P
Sbjct: 411 PSAGAPMPPIPNMSNMSGMPPLPNMP 436
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 26.6 bits (56), Expect = 0.28
Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 3/101 (2%)
Frame = +3
Query: 288 WIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSW 458
W D RL + N ++ + + +W PD ++ R+ NG+V++
Sbjct: 117 WYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNY 176
Query: 459 IKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEMDFV 581
+ R + +L+ +P D C+F S + + +V
Sbjct: 177 LMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 26.6 bits (56), Expect = 0.28
Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 3/101 (2%)
Frame = +3
Query: 288 WIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSW 458
W D RL + N ++ + + +W PD ++ R+ NG+V++
Sbjct: 117 WYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNY 176
Query: 459 IKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEMDFV 581
+ R + +L+ +P D C+F S + + +V
Sbjct: 177 LMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 26.6 bits (56), Expect = 0.28
Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 3/101 (2%)
Frame = +3
Query: 288 WIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSW 458
W D RL + N ++ + + +W PD ++ R+ NG+V++
Sbjct: 168 WYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNY 227
Query: 459 IKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEMDFV 581
+ R + +L+ +P D C+F S + + +V
Sbjct: 228 LMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 268
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 26.6 bits (56), Expect = 0.28
Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 3/101 (2%)
Frame = +3
Query: 288 WIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSW 458
W D RL + N ++ + + +W PD ++ R+ NG+V++
Sbjct: 117 WYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNY 176
Query: 459 IKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEMDFV 581
+ R + +L+ +P D C+F S + + +V
Sbjct: 177 LMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 24.2 bits (50), Expect = 1.5
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +2
Query: 191 KIVVNLTLHLRHANIRES--ESTVRIQADLQLDELDRQTTELERR 319
K+ + L+ LR+ +R ES R+QAD+ L D LE R
Sbjct: 497 KLKIVLSTILRNFRVRSDVKESEFRLQADIILKRADGFKIRLEPR 541
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,385
Number of Sequences: 438
Number of extensions: 4324
Number of successful extensions: 80
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -