Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_L16
         (841 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-P...    29   6.0  
AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ...    29   7.9  
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA...    29   7.9  

>AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-PB,
           isoform B protein.
          Length = 2133

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
 Frame = +3

Query: 576 YYWRSRPYAS-SHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIPE 710
           Y    +P+ S  H P      QP HQ P    QP    HP P  P+
Sbjct: 9   YQTHHQPHPSMQHHPTHPHHQQPHHQQPHHPQQPIHQHHPPPPPPQ 54


>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
            initiation factoreIF4G protein.
          Length = 1666

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +3

Query: 306  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 431
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1572 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1612


>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
            protein.
          Length = 1345

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +3

Query: 306  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 431
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1251 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1291


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,001,594
Number of Sequences: 53049
Number of extensions: 792055
Number of successful extensions: 2587
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2584
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)