Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_L16
         (841 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00046-6|AAN65305.1|  422|Caenorhabditis elegans Mammalian zak k...    31   1.3  
U00046-5|AAC47047.4|  516|Caenorhabditis elegans Mammalian zak k...    31   1.3  
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p...    30   1.8  
AL132862-11|CAB60541.1|  396|Caenorhabditis elegans Hypothetical...    29   3.1  
AC024751-12|ABF71717.1|  301|Caenorhabditis elegans Collagen pro...    29   5.4  
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    28   9.5  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    28   9.5  

>U00046-6|AAN65305.1|  422|Caenorhabditis elegans Mammalian zak
           kinase homolog protein1, isoform b protein.
          Length = 422

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 297 GTVSSTFDHPFSTPVLRSYWHRNQ 368
           G +++ F H  S+P LR +WHR Q
Sbjct: 306 GHLNNGFHHTTSSPQLRGFWHRKQ 329


>U00046-5|AAC47047.4|  516|Caenorhabditis elegans Mammalian zak
           kinase homolog protein1, isoform a protein.
          Length = 516

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 297 GTVSSTFDHPFSTPVLRSYWHRNQ 368
           G +++ F H  S+P LR +WHR Q
Sbjct: 400 GHLNNGFHHTTSSPQLRGFWHRKQ 423


>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
           protein T20D3.11 protein.
          Length = 1843

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 594 PYASSHPPLRSRLHQPDHQIPDS 662
           P +S HPPL S  H  +H  PD+
Sbjct: 66  PTSSHHPPLNSSSHHSNHNYPDT 88


>AL132862-11|CAB60541.1|  396|Caenorhabditis elegans Hypothetical
           protein Y73F8A.16 protein.
          Length = 396

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 328 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD 432
           F  L F++TG E KS  V + S+    +I  GYR+
Sbjct: 37  FPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRN 71


>AC024751-12|ABF71717.1|  301|Caenorhabditis elegans Collagen
           protein 47 protein.
          Length = 301

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = -2

Query: 714 GVQGLMEMDVKSGVVGVWNRGFDDRVDVAEIAGEGGLMHKGETANSNARG*RGG 553
           G  GL   D   G  G    G  D V +  + G+ G   +GE  N  ++G RGG
Sbjct: 167 GPPGLAGQDGLDGAPGEPGVGGMDAVKIVSVDGKIG--RRGEAGNKGSKGSRGG 218


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
             protein.
          Length = 18519

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = -1

Query: 106   HNFFHE*VIKKSSCKTPSTEGSEKRGAKRVRANTS 2
             H+ + E  +K S  K+P T G+E  G++ + A+++
Sbjct: 11727 HDTYSEKTVKSSKKKSPQTAGAEYGGSESLNASSA 11761


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
             protein.
          Length = 18534

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = -1

Query: 106   HNFFHE*VIKKSSCKTPSTEGSEKRGAKRVRANTS 2
             H+ + E  +K S  K+P T G+E  G++ + A+++
Sbjct: 11727 HDTYSEKTVKSSKKKSPQTAGAEYGGSESLNASSA 11761


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,352,538
Number of Sequences: 27780
Number of extensions: 374792
Number of successful extensions: 1180
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1174
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)