Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_L13
(799 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 48 8e-08
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 46 5e-07
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 45 7e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 45 9e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 44 1e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 44 1e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 42 7e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 42 9e-06
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 41 1e-05
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 41 1e-05
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 41 2e-05
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 40 3e-05
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 40 4e-05
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 39 6e-05
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 38 8e-05
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 38 8e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 38 8e-05
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 38 1e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 38 1e-04
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 36 3e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 36 6e-04
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 35 8e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 34 0.002
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 32 0.005
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 32 0.005
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 32 0.005
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 32 0.007
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 31 0.012
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 31 0.012
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 25 1.1
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 25 1.1
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 25 1.1
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 25 1.1
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 7.6
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 48.4 bits (110), Expect = 8e-08
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Frame = +2
Query: 320 PRERLWRPDVVLLNAAATTAGDYTLRAR----VSNNGSVSWIKRLDISTPISMQLDNWPN 487
P +++W+PD+VL N A G+Y +R + + NG V W+ + ++ + +P
Sbjct: 104 PPDKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPF 160
Query: 488 DMQTCTFKFRSXMHHSDQM 544
D QTC KF S + DQ+
Sbjct: 161 DQQTCIMKFGSWTFNGDQV 179
Score = 23.8 bits (49), Expect = 1.9
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 165 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGXVG 299
K+ VN L ++ N+ E ++ L+ W D +L W+ G
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYG 96
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 45.6 bits (103), Expect = 5e-07
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +2
Query: 296 GAAALGWCPRERLWRPDVVLLNAAATTAGDYTL--RARVSNNGSVSWIKRLDISTPISMQ 469
G + + P E +W PD+VL N A + TL +A + G VSW + +
Sbjct: 103 GGVEMLYVPSENIWLPDIVLYNNADGNY-EVTLMTKATLKYTGDVSWKPPAIYKSSCEIN 161
Query: 470 LDNWPNDMQTCTFKFRSXMHHSDQMD 547
++ +P D Q+C KF S ++ Q+D
Sbjct: 162 VEYFPFDEQSCIMKFGSWTYNGAQVD 187
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 45.2 bits (102), Expect = 7e-07
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 314 WCPRERLWRPDVVLLNAAATTAGDYTL-RARVSNNGSVSWIKRLDISTPISMQLDNWPND 490
+ P E +W PD+VL N A G T+ +A + G V W + + + +P D
Sbjct: 96 YVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFD 155
Query: 491 MQTCTFKFRSXMHHSDQMD 547
QTC KF S + Q+D
Sbjct: 156 QQTCFMKFGSWTYDGIQID 174
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 44.8 bits (101), Expect = 9e-07
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +2
Query: 320 PRERLWRPDVVLLNAAATTAGDYTLRARVSNN--GSVSWIKRLDISTPISMQLDNWPNDM 493
P + +WRPD+VL N A + TL + + N G V W + + ++ +P D
Sbjct: 102 PSDHIWRPDIVLYNNADGNF-EVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 494 QTCTFKFRSXMHHSDQMD 547
QTC KF S + Q+D
Sbjct: 161 QTCVMKFGSWTYDGFQVD 178
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 44.4 bits (100), Expect = 1e-06
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +2
Query: 281 ERRXSGAAALGWCPRERLWRPDVVLLNAAATTAGDYTL--RARVSNNGSVSWIKRLDIST 454
E + G + P + +WRPD+VL N A + TL +A + + G V W +
Sbjct: 93 EPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNF-EVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 455 PISMQLDNWPNDMQTCTFKFRSXMHHSDQMD 547
+ ++ +P D QTC KF S + ++D
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 44.4 bits (100), Expect = 1e-06
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 320 PRERLWRPDVVLLNAAATTA-GDYTLRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 496
P RLW+PDV++ N+A G Y V NNG+ ++ + + + +P D Q
Sbjct: 101 PPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDDQ 160
Query: 497 TCTFKFRSXMHHSDQMD 547
C KF S + Q+D
Sbjct: 161 RCEMKFGSWTYDGFQLD 177
Score = 22.2 bits (45), Expect = 5.7
Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Frame = +3
Query: 66 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 230
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 231 RIQADLQMNWIDKRLSWNAGXVG 299
L++ W D + WN G
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYG 93
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 43.6 bits (98), Expect = 2e-06
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = +2
Query: 281 ERRXSGAAALGWCPRERLWRPDVVLLNAAATTAGDYTL----RARVSNNGSVSWIKRLDI 448
E + G + P + +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 93 EPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVY 149
Query: 449 STPISMQLDNWPNDMQTCTFKFRSXMHHSDQMD 547
+ S+ ++ +P D+QTC K S + ++D
Sbjct: 150 KSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 41.9 bits (94), Expect = 7e-06
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +2
Query: 326 ERLWRPDVVLLNAAATTAGDYTLR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 496
ER+WRPD N + T+ R+S +G + + RL I M+L N+P D Q
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 497 TC 502
+C
Sbjct: 175 SC 176
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 41.5 bits (93), Expect = 9e-06
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +2
Query: 320 PRERLWRPDVVLLNAAATTAGDYTLRARV--SNNGSVSWIKRLDISTPISMQLDNWPNDM 493
P R+WRPD +L N A + V S+ G V W+ + + ++ +P D
Sbjct: 83 PYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDE 142
Query: 494 QTCTFKFRSXMHHSDQMD 547
Q C K+ S + Q++
Sbjct: 143 QRCVLKWASWTYDGYQLE 160
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 41.1 bits (92), Expect = 1e-05
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +2
Query: 329 RLWRPDVVLLNAAATTA-GDYTLRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 505
+LW+PD+++ N+A G Y V++NGS ++ + + + +P D Q C
Sbjct: 135 KLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCD 194
Query: 506 FKFRSXMHHSDQMD 547
KF S + +Q+D
Sbjct: 195 MKFGSWTYDGNQVD 208
Score = 25.8 bits (54), Expect = 0.47
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 204 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 299
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 41.1 bits (92), Expect = 1e-05
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +2
Query: 329 RLWRPDVVLLNAAATTA-GDYTLRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 505
+LW+PD+++ N+A G Y V++NGS ++ + + + +P D Q C
Sbjct: 135 KLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCD 194
Query: 506 FKFRSXMHHSDQMD 547
KF S + +Q+D
Sbjct: 195 MKFGSWTYDGNQVD 208
Score = 25.8 bits (54), Expect = 0.47
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 204 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 299
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 40.7 bits (91), Expect = 2e-05
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +2
Query: 329 RLWRPDVVLLNAAATTA-GDYTLRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 505
+LW+PD+++ N+A G Y V++NGS ++ + + + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCD 126
Query: 506 FKFRSXMHHSDQMD 547
KF S + +Q+D
Sbjct: 127 MKFGSWTYDGNQVD 140
Score = 25.8 bits (54), Expect = 0.47
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 204 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 299
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 39.9 bits (89), Expect = 3e-05
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +2
Query: 329 RLWRPDVVLLNAAATTA-GDYTLRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 505
+LW+PD+++ N+A G Y V+++GS ++ + M + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCD 126
Query: 506 FKFRSXMHHSDQMD 547
KF S + +Q+D
Sbjct: 127 MKFGSWTYDGNQVD 140
Score = 25.8 bits (54), Expect = 0.47
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 204 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 299
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 39.5 bits (88), Expect = 4e-05
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +2
Query: 329 RLWRPDVVLLNAAATTA-GDYTLRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 505
+LW+PD+++ N+A G Y V+++GS ++ + M + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCD 126
Query: 506 FKFRSXMHHSDQMD 547
KF S + +Q+D
Sbjct: 127 MKFGSWTYDGNQVD 140
Score = 25.8 bits (54), Expect = 0.47
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 204 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 299
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 38.7 bits (86), Expect = 6e-05
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +2
Query: 329 RLWRPDVVLLNAAATTA-GDYTLRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 505
+LW+PD+++ N+A G Y V+++GS ++ + + + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCD 126
Query: 506 FKFRSXMHHSDQMD 547
KF S + +Q+D
Sbjct: 127 MKFGSWTYDGNQVD 140
Score = 25.8 bits (54), Expect = 0.47
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 204 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 299
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 38.3 bits (85), Expect = 8e-05
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +2
Query: 329 RLWRPDVVLLNAAATTA-GDYTLRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 505
+LW+PD+++ N+A G Y V+++GS ++ + + + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCD 126
Query: 506 FKFRSXMHHSDQMD 547
KF S + +Q+D
Sbjct: 127 MKFGSWTYDGNQVD 140
Score = 25.8 bits (54), Expect = 0.47
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 204 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 299
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 38.3 bits (85), Expect = 8e-05
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +2
Query: 329 RLWRPDVVLLNAAATTA-GDYTLRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 505
+LW+PD+++ N+A G Y V+++GS ++ + + + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCD 126
Query: 506 FKFRSXMHHSDQMD 547
KF S + +Q+D
Sbjct: 127 MKFGSWTYDGNQVD 140
Score = 25.8 bits (54), Expect = 0.47
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 204 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 299
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 38.3 bits (85), Expect = 8e-05
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +2
Query: 326 ERLWRPDVVLLNAAATTAGDYTLR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 496
E++W PD N + D T R R+S +GSV++ R + M L +P D Q
Sbjct: 114 EKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQ 173
Query: 497 TCTFKFRS 520
CT + S
Sbjct: 174 NCTVEIES 181
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 37.9 bits (84), Expect = 1e-04
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +2
Query: 320 PRERLWRPDVVLLNAAATTAGDYTL----RARVSNNGSVSWIKRLDISTPISMQLDNWPN 487
P E +W PD+VL N A G+Y + +A + + G V W + + ++ +P
Sbjct: 98 PSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPF 154
Query: 488 DMQTCTFKFRSXMHHSDQMD 547
D QTC KF S + +D
Sbjct: 155 DEQTCFMKFGSWTYDGYTVD 174
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 37.5 bits (83), Expect = 1e-04
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +2
Query: 329 RLWRPDVVLLNAAATTAGDYTLR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQT 499
R+W+PD N + T R+ +G V + RL I M L+N+P D Q
Sbjct: 84 RIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQR 143
Query: 500 CTFKFRS 520
C +F S
Sbjct: 144 CPLQFGS 150
Score = 34.3 bits (75), Expect = 0.001
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 93 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 260
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 261 IDKRLSWNAG 290
+D+RL++ G
Sbjct: 62 VDRRLAFQGG 71
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 36.3 bits (80), Expect = 3e-04
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 87 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 251
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 252 MNWIDKRLSWNA 287
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
Score = 28.3 bits (60), Expect = 0.087
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +2
Query: 332 LWRPDVVLLNAAATTAGDY---TLRARVSNNGSVSWIKRLDISTPISMQLDN--WPNDMQ 496
+W PD+V+ ++ + D ++ V N+G++ + TP+ + D+ WP D+
Sbjct: 115 IWVPDIVM-HSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPVC-EYDHTWWPYDIL 171
Query: 497 TCTFKFRSXMHHSDQMDXGGL 559
CT S H S+++ L
Sbjct: 172 NCTIHIASWSHGSNEIKLNSL 192
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 35.5 bits (78), Expect = 6e-04
Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +2
Query: 326 ERLWRPDVVLLNAAATTAGDYTLRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 496
+ +WRPD NA + T T+ + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 497 TCTFKFRSXMHHSDQM 544
C + S H +D+M
Sbjct: 176 ECKLQMESLSHTTDEM 191
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 35.1 bits (77), Expect = 8e-04
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +2
Query: 332 LWRPDVVLLNAAATT---AGDYTLRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 502
+W PD+ + N+ T G V ++GSVS + + + +WP D C
Sbjct: 124 IWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRC 183
Query: 503 TFKFRSXMHHSDQMD 547
F S +H ++++
Sbjct: 184 RINFGSWVHSGEEVN 198
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 33.9 bits (74), Expect = 0.002
Identities = 15/74 (20%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +2
Query: 332 LWRPDVVLLNAAATTAGDYTLRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 502
+WRPD NA T + ++ + ++ ++ ++ +L + +M+ +++P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 503 TFKFRSXMHHSDQM 544
+ S H + +
Sbjct: 147 SMMIESLSHTTQDL 160
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 32.3 bits (70), Expect = 0.005
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Frame = +2
Query: 326 ERLWRPDVVLLNAA------ATTAGDYTLRARVSNNGSVSWIKRLDISTPISMQLDNWPN 487
+ +W PD +N ATT+ ++ R+ ++GS++ RL I+ M L +P
Sbjct: 91 KNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQYFPM 147
Query: 488 DMQTCTFKFRS 520
D Q C + S
Sbjct: 148 DRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 32.3 bits (70), Expect = 0.005
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Frame = +2
Query: 326 ERLWRPDVVLLNAA------ATTAGDYTLRARVSNNGSVSWIKRLDISTPISMQLDNWPN 487
+ +W PD +N ATT+ ++ R+ ++GS++ RL I+ M L +P
Sbjct: 91 KNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQYFPM 147
Query: 488 DMQTCTFKFRS 520
D Q C + S
Sbjct: 148 DRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 32.3 bits (70), Expect = 0.005
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Frame = +2
Query: 326 ERLWRPDVVLLNAA------ATTAGDYTLRARVSNNGSVSWIKRLDISTPISMQLDNWPN 487
+ +W PD +N ATT+ ++ R+ ++GS++ RL I+ M L +P
Sbjct: 30 KNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQYFPM 86
Query: 488 DMQTCTFKFRS 520
D Q C + S
Sbjct: 87 DRQLCHIEIES 97
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 31.9 bits (69), Expect = 0.007
Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Frame = +2
Query: 326 ERLWRPDVVLLNAAATTAGDYTLR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 496
+ LW+PD LNA + + + N +V + R+ M+ +P D+Q
Sbjct: 69 DSLWQPDPYFLNAKVSEIAALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 497 TCTFKFRSXMHHSDQM 544
C S +H ++
Sbjct: 129 ICPIYIESFSYHKQKL 144
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 31.1 bits (67), Expect = 0.012
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +2
Query: 329 RLWRPDVVLLNAAATTAGDYTLR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQT 499
R+W PD+ N + + R+ NGSV + R+ ++ M L +P D Q
Sbjct: 114 RVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQV 173
Query: 500 CTFKFRSXMHHSDQM 544
C+ + S +D +
Sbjct: 174 CSLRMASYGWTTDDL 188
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 31.1 bits (67), Expect = 0.012
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +2
Query: 329 RLWRPDVVLLNAAATTAGDYTLR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQT 499
R+W PD+ N + + R+ NGSV + R+ ++ M L +P D Q
Sbjct: 114 RVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQV 173
Query: 500 CTFKFRSXMHHSDQM 544
C+ + S +D +
Sbjct: 174 CSLRMASYGWTTDDL 188
Score = 27.9 bits (59), Expect = 0.12
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Frame = +3
Query: 114 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 272
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 273 LSWN 284
L +N
Sbjct: 95 LRFN 98
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 24.6 bits (51), Expect = 1.1
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +2
Query: 401 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFRS 520
R+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 24.6 bits (51), Expect = 1.1
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +2
Query: 401 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFRS 520
R+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 24.6 bits (51), Expect = 1.1
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +2
Query: 401 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFRS 520
R+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 218 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 257
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 24.6 bits (51), Expect = 1.1
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +2
Query: 401 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFRS 520
R+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.8 bits (44), Expect = 7.6
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +2
Query: 293 SGAAALGWCPRERLWRPDVVLLNAAATTAGDYTLRARVSNNGSV 424
+G A+ C +PD++ + A + GD +V NG++
Sbjct: 17 NGTGAVVECQARGNPQPDIIWVRADGSAVGDVPGLRQVLPNGNL 60
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,583
Number of Sequences: 438
Number of extensions: 4282
Number of successful extensions: 69
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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