Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_L02
(770 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342... 204 5e-53
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327... 203 1e-52
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 32 0.44
08_01_0600 - 5262573-5262773,5262850-5262952,5263050-5263180,526... 32 0.58
07_01_0080 + 587674-588510 27 0.63
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753... 31 1.0
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.3
04_03_0800 - 19820886-19821421,19822476-19822563,19822871-19822888 27 1.8
07_01_0479 + 3606663-3607448 30 2.4
03_05_1081 + 30235677-30236474 30 2.4
01_05_0125 - 18382402-18382761,18382863-18383036 29 3.1
05_06_0108 - 25620685-25621115,25621517-25621602,25621963-25622507 29 4.1
05_04_0324 - 20273797-20274261 29 4.1
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 28 7.2
07_03_0600 + 19866757-19867218,19867920-19868429 28 7.2
02_04_0400 - 22608519-22608844,22609044-22609122 28 7.2
09_02_0495 + 9880714-9881196 28 9.5
05_04_0011 + 17139322-17139451,17139552-17140174 28 9.5
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 28 9.5
>12_01_0435 +
3428552-3428636,3429242-3429352,3429434-3429738,
3429821-3430230,3430323-3430556,3430934-3431378,
3432300-3432390,3433292-3433518,3433786-3433861,
3434009-3434134,3434221-3434384
Length = 757
Score = 204 bits (499), Expect = 5e-53
Identities = 88/121 (72%), Positives = 107/121 (88%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKF PRHGS+GF P+KRS RHRGKVK+FPKDD SKP HLT+F+GYKAGMTH+VRE
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREV 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
++PGSK++KKE EAVTIIETPP+V VG+V Y++TP GLR+L +VWA+H+SE+ RRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYK 120
Query: 394 N 396
N
Sbjct: 121 N 121
>11_01_0427 +
3274817-3274901,3275587-3275697,3275979-3276283,
3276406-3276815,3276942-3277200
Length = 389
Score = 203 bits (495), Expect = 1e-52
Identities = 87/121 (71%), Positives = 107/121 (88%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKF PRHGS+GF P+KRS RHRGKVK+FPKDD +KP HLT+F+GYKAGMTH+VRE
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVNKPCHLTSFVGYKAGMTHIVREV 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
++PGSK++KKE EAVTIIETPP+V VG+V Y++TP GLR+L +VWA+H+SE+ RRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPIVVVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYK 120
Query: 394 N 396
N
Sbjct: 121 N 121
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 32.3 bits (70), Expect = 0.44
Identities = 24/73 (32%), Positives = 25/73 (34%), Gaps = 6/73 (8%)
Frame = +1
Query: 487 PPPXKXGGXLXXXGGXXFXXAXXXKXG--SLXPPXKXGGX----LXXPPXKXXXXXPXPX 648
PPP GG GG A G + PP GG PP P P
Sbjct: 1122 PPPPPIGGL----GGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPN 1177
Query: 649 XXGXXXPPPPPXR 687
G PPPPP R
Sbjct: 1178 AHGGVAPPPPPPR 1190
Score = 31.9 bits (69), Expect = 0.58
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 590 GGGXXXPPPXKXXXXXPPPXXXGXXXPPPP 679
GG PPP PPP G PPPP
Sbjct: 1158 GGPPAPPPPAGFRGGTPPPNAHGGVAPPPP 1187
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/66 (30%), Positives = 22/66 (33%), Gaps = 1/66 (1%)
Frame = +2
Query: 485 PPPXKKXGXFXXXGGGXFXPGXXXXKXGXXXPXKXGGGXXXPPPXK-XXXXXPPPXXXGX 661
PPP G GG P + G P GG PPP + PP G
Sbjct: 1149 PPPPPVGGL----GGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGA 1204
Query: 662 XXPPPP 679
PP P
Sbjct: 1205 PAPPMP 1210
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/64 (29%), Positives = 19/64 (29%), Gaps = 1/64 (1%)
Frame = -3
Query: 672 GGXXXPXXXGG-GXXXXXFXGGGXXXPPPFXXGXXXPXFXXXXPGKXXPPPXXXXXPXFX 496
GG P GG G G PP G P PG PPP P
Sbjct: 1171 GGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGRGLPAPP 1230
Query: 495 XGGG 484
G G
Sbjct: 1231 GGRG 1234
>08_01_0600 -
5262573-5262773,5262850-5262952,5263050-5263180,
5263263-5263312,5265266-5265725,5266349-5266708
Length = 434
Score = 31.9 bits (69), Expect = 0.58
Identities = 19/69 (27%), Positives = 22/69 (31%), Gaps = 4/69 (5%)
Frame = +2
Query: 482 PPPPXKKXGXFXXXGG----GXFXPGXXXXKXGXXXPXKXGGGXXXPPPXKXXXXXPPPX 649
PPPP + G G G P + P G PPP + PPP
Sbjct: 3 PPPPPPQAGVAGGGGAPPQWGAIPPPVPHQQQQYAPPPPQMWGQAPPPPPQMWGQAPPPP 62
Query: 650 XXGXXXPPP 676
PPP
Sbjct: 63 QPAYGQPPP 71
>07_01_0080 + 587674-588510
Length = 278
Score = 26.6 bits (56), Expect(2) = 0.63
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 608 PPPXKXXXXXPPPXXXGXXXPPPP 679
PPP PPP PPPP
Sbjct: 96 PPPPSSGSPPPPPPPPPPPPPPPP 119
Score = 23.8 bits (49), Expect(2) = 0.63
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 368 KTVDVASTK-TALLSKDESFINMPXXCXXWGPFXFPXXXPPPP 493
++V VAS++ T+L + + + P G F P PPPP
Sbjct: 56 RSVAVASSRLTSLEQQGAASTSTPPRLGGDGMFRRPPPPPPPP 98
>07_03_0481 -
18572206-18574314,18574591-18575185,18575304-18575371,
18577344-18577458,18578179-18578333,18578673-18580621,
18580691-18581372,18581550-18581621,18582558-18583199,
18583301-18583402,18585011-18585100
Length = 2192
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 13 SLRLSSSMSHRKFSAPRHGSM-GFYPKKRSRRHRGKVKAFPKDDPSKPVHLT 165
S+ S+S+ H + P+ S+ G P +++ + KVK K P VH+T
Sbjct: 233 SMEPSTSLEHSESPPPKRKSLDGRTPASSTKKGKKKVKFVDKKHPENAVHIT 284
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/70 (28%), Positives = 20/70 (28%)
Frame = +2
Query: 470 PXXXPPPPXKKXGXFXXXGGGXFXPGXXXXKXGXXXPXKXGGGXXXPPPXKXXXXXPPPX 649
P PPPP K G P G PPP K PPP
Sbjct: 311 PAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPP-AKGPPPPPPPKGPSPPPPPP 369
Query: 650 XXGXXXPPPP 679
G PPP
Sbjct: 370 PGGKKGGPPP 379
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/66 (27%), Positives = 18/66 (27%)
Frame = +1
Query: 484 PPPPXKXGGXLXXXGGXXFXXAXXXKXGSLXPPXKXGGXLXXPPXKXXXXXPXPXXXGXX 663
PPPP K PP G PP K P P G
Sbjct: 315 PPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKK 374
Query: 664 XPPPPP 681
PPPP
Sbjct: 375 GGPPPP 380
>04_03_0800 - 19820886-19821421,19822476-19822563,19822871-19822888
Length = 213
Score = 27.5 bits (58), Expect(2) = 1.8
Identities = 20/73 (27%), Positives = 20/73 (27%), Gaps = 3/73 (4%)
Frame = +2
Query: 470 PXXXPPPPXKKX---GXFXXXGGGXFXPGXXXXKXGXXXPXKXGGGXXXPPPXKXXXXXP 640
P PPPP K GGG P G G PP
Sbjct: 123 PEPPPPPPKPKPCECTYCGGHGGGCNKPAVPPCAGGCSISDGGACGASCKPPPPPPPAIW 182
Query: 641 PPXXXGXXXPPPP 679
PP PPPP
Sbjct: 183 PPQPSFYYYPPPP 195
Score = 21.4 bits (43), Expect(2) = 1.8
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 458 PFXFPXXXPPPP 493
PF P PPPP
Sbjct: 97 PFPVPYPAPPPP 108
>07_01_0479 + 3606663-3607448
Length = 261
Score = 29.9 bits (64), Expect = 2.4
Identities = 23/73 (31%), Positives = 23/73 (31%)
Frame = +2
Query: 458 PFXFPXXXPPPPXKKXGXFXXXGGGXFXPGXXXXKXGXXXPXKXGGGXXXPPPXKXXXXX 637
P FP PPPP G F G P GG PPP
Sbjct: 194 PPAFPGGPPPPP------------GPFMRGPPPMGPPQVRPGMPGG----PPPGMRPGMP 237
Query: 638 PPPXXXGXXXPPP 676
PPP G PPP
Sbjct: 238 PPPFRPGMPPPPP 250
>03_05_1081 + 30235677-30236474
Length = 265
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 608 PPPXKXXXXXPPPXXXGXXXPPPP 679
PPP PPP G PPPP
Sbjct: 40 PPPPSAYPAAPPPPVMGQPVPPPP 63
>01_05_0125 - 18382402-18382761,18382863-18383036
Length = 177
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -2
Query: 409 REESSFCRSDVDSLQTYAPPRQSTERVVHEGSQCIQQHRHKPSE 278
R+ S ++ +L PPR ST R+V E C+ + R + +E
Sbjct: 38 RQTMSRLYDELGALLPNLPPRASTTRIVEEAIACVGELRARTAE 81
>05_06_0108 - 25620685-25621115,25621517-25621602,25621963-25622507
Length = 353
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 611 PPXKXXXXXPPPXXXGXXXPPPP 679
PP K PPP G PPPP
Sbjct: 123 PPRKEVLALPPPPSPGTPAPPPP 145
>05_04_0324 - 20273797-20274261
Length = 154
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 127 FPKDDPSKPVHLTAFIGYKAGMTHVVRE--PDRPGSKINKKEIVEAVTIIETPPMVCVGV 300
FP D+P K VH+ G + +T ++ E P + +N EA + P CVGV
Sbjct: 60 FPPDNPQKFVHVHRVFG-ASNVTKLLNELHPYQREDAVNSL-AYEADMRLRDPVYGCVGV 117
Query: 301 VGYIETPHGLRAL 339
+ ++ H LR L
Sbjct: 118 ISVLQ--HQLRQL 128
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/69 (26%), Positives = 19/69 (27%)
Frame = +2
Query: 470 PXXXPPPPXKKXGXFXXXGGGXFXPGXXXXKXGXXXPXKXGGGXXXPPPXKXXXXXPPPX 649
P PPPP F PG + P PPP PPP
Sbjct: 50 PFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPP 109
Query: 650 XXGXXXPPP 676
PPP
Sbjct: 110 PPPPPSPPP 118
>07_03_0600 + 19866757-19867218,19867920-19868429
Length = 323
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 578 PXKXGGGXXXPPPXKXXXXXPPPXXXGXXXPPP 676
P GG PPP + PPP PPP
Sbjct: 7 PTMNGGHHAAPPPPQVSGAPPPPHGHYQQQPPP 39
>02_04_0400 - 22608519-22608844,22609044-22609122
Length = 134
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -3
Query: 678 GGGGXXXPXXXGGGXXXXXFXGGGXXXPPPFXXGXXXP 565
GGGG GGG GGG PP+ G P
Sbjct: 67 GGGGGGGGGGGGGGGGGGGGGGGGGGYYPPWNGGYYPP 104
>09_02_0495 + 9880714-9881196
Length = 160
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Frame = -3
Query: 645 GGGXXXXXFXGGGXXXPPP--FXXGXXXPXFXXXXPGKXXPPPXXXXXPXF 499
GGG GG PPP G P F P PPP P F
Sbjct: 65 GGGDGGAGGLFGGTYPPPPPGVMPGAFAPPFGGGFPYGPAPPPPNPILPWF 115
>05_04_0011 + 17139322-17139451,17139552-17140174
Length = 250
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/74 (24%), Positives = 21/74 (28%), Gaps = 3/74 (4%)
Frame = +1
Query: 469 PXXXXPPPPXKXGGXLXXXGGXXFXXAXXXKXGSLXPPXKX---GGXLXXPPXKXXXXXP 639
P PPP GG + G PP GG + + P
Sbjct: 103 PPPPPPPPSPPNGGKVIGDGKRLTPTGPDPVHNKFQPPPPSPPNGGNVIGDGKRLTPTGP 162
Query: 640 XPXXXGXXXPPPPP 681
P PPPPP
Sbjct: 163 DPIHNEFQPPPPPP 176
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -3
Query: 678 GGGGXXXPXXXGGGXXXXXFXGGGXXXPPPFXXG 577
GG G P GG GGG PPP+ G
Sbjct: 369 GGQGSLPPSYDGGYGGRPMPGGGGPGAPPPYHGG 402
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,823,304
Number of Sequences: 37544
Number of extensions: 535365
Number of successful extensions: 2142
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1825
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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