Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_L02
(770 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 217 1e-56
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 217 1e-56
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 217 1e-56
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 217 1e-56
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 217 1e-56
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 217 1e-56
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 64 1e-10
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 37 0.014
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.17
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.17
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.23
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.23
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.23
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.30
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.30
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.30
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 0.91
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 3.7
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 4.8
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 28 6.4
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 28 6.4
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 28 8.5
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 28 8.5
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 217 bits (529), Expect = 1e-56
Identities = 92/121 (76%), Positives = 108/121 (89%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 394 N 396
N
Sbjct: 121 N 121
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 217 bits (529), Expect = 1e-56
Identities = 92/121 (76%), Positives = 108/121 (89%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 394 N 396
N
Sbjct: 121 N 121
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 217 bits (529), Expect = 1e-56
Identities = 92/121 (76%), Positives = 108/121 (89%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 394 N 396
N
Sbjct: 121 N 121
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 217 bits (529), Expect = 1e-56
Identities = 92/121 (76%), Positives = 108/121 (89%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 394 N 396
N
Sbjct: 121 N 121
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 217 bits (529), Expect = 1e-56
Identities = 92/121 (76%), Positives = 108/121 (89%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 394 N 396
N
Sbjct: 121 N 121
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 217 bits (529), Expect = 1e-56
Identities = 92/121 (76%), Positives = 108/121 (89%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 394 N 396
N
Sbjct: 121 N 121
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 63.7 bits (148), Expect = 1e-10
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPK 135
MSHRKFSAPRHG MGF PKKRSR +RG++KAF K
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 63.7 bits (148), Expect = 1e-10
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPK 135
MSHRKFSAPRHG MGF PKKRSR +RG++KAF K
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 37.1 bits (82), Expect = 0.014
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = +2
Query: 530 GXFXPGXXXXKXGXXXPXKXGGGXXXPPPXKXXXXXPPPXXXGXXXPPPP 679
G PG K P G PPP PPP G PPPP
Sbjct: 50 GILPPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPP 99
Score = 34.3 bits (75), Expect = 0.098
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +2
Query: 566 GXXXPXKXGGGXXXPPPXKXXXXXPPPXXXGXXXPPPP 679
G P GG PPP PPP G PPPP
Sbjct: 72 GFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPP 109
Score = 33.1 bits (72), Expect = 0.23
Identities = 28/110 (25%), Positives = 34/110 (30%), Gaps = 6/110 (5%)
Frame = +2
Query: 368 KTVDVASTKTALLSKDESFINMPXXCXXWG------PFXFPXXXPPPPXKKXGXFXXXGG 529
KTVD + ++DES +++ G P PPP G
Sbjct: 21 KTVDKSKPVIIAENEDESEVSVTKQAPPSGILPPGQSIPKPSFFIPPPVPNGFIPPPPGP 80
Query: 530 GXFXPGXXXXKXGXXXPXKXGGGXXXPPPXKXXXXXPPPXXXGXXXPPPP 679
G P G P GG PPP PPP P PP
Sbjct: 81 GGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPP 130
Score = 32.7 bits (71), Expect = 0.30
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +1
Query: 577 PPXKXGGXLXXPPXKXXXXXPXPXXXGXXXPPPPP 681
PP G + PP P P G PPPPP
Sbjct: 86 PPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/65 (26%), Positives = 19/65 (29%)
Frame = +1
Query: 487 PPPXKXGGXLXXXGGXXFXXAXXXKXGSLXPPXKXGGXLXXPPXKXXXXXPXPXXXGXXX 666
PPP G G G + PP G + PP P P G
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGV 125
Query: 667 PPPPP 681
P PP
Sbjct: 126 APQPP 130
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.17
Identities = 24/80 (30%), Positives = 25/80 (31%), Gaps = 5/80 (6%)
Frame = +2
Query: 455 GPFXFPXXXPPPPXKKXGXFXXXGGGXFXPGXXXXKXGXXXPX-----KXGGGXXXPPPX 619
GP P PPPP + G G P G P G G PPP
Sbjct: 309 GPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 368
Query: 620 KXXXXXPPPXXXGXXXPPPP 679
PP G PPPP
Sbjct: 369 SRPPA--PPSGHGMIPPPPP 386
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 577 PPXKXGGXLXXPPXKXXXXXPXPXXXGXXXPPPPPXR 687
PP G PP P P PPPPP R
Sbjct: 288 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 324
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.5 bits (73), Expect = 0.17
Identities = 24/80 (30%), Positives = 25/80 (31%), Gaps = 5/80 (6%)
Frame = +2
Query: 455 GPFXFPXXXPPPPXKKXGXFXXXGGGXFXPGXXXXKXGXXXPX-----KXGGGXXXPPPX 619
GP P PPPP + G G P G P G G PPP
Sbjct: 319 GPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 378
Query: 620 KXXXXXPPPXXXGXXXPPPP 679
PP G PPPP
Sbjct: 379 SRPPA--PPSGHGMIPPPPP 396
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 577 PPXKXGGXLXXPPXKXXXXXPXPXXXGXXXPPPPPXR 687
PP G PP P P PPPPP R
Sbjct: 298 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 334
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.23
Identities = 21/66 (31%), Positives = 21/66 (31%)
Frame = +2
Query: 482 PPPPXKKXGXFXXXGGGXFXPGXXXXKXGXXXPXKXGGGXXXPPPXKXXXXXPPPXXXGX 661
PPPP G GG P G P G PPP PPP G
Sbjct: 726 PPPPPPPGGLPPITGGPPPPP-----PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
Query: 662 XXPPPP 679
PPP
Sbjct: 781 KGGPPP 786
Score = 32.7 bits (71), Expect = 0.30
Identities = 24/73 (32%), Positives = 24/73 (32%), Gaps = 2/73 (2%)
Frame = +1
Query: 469 PXXXXPPPPXKXGGXLXXXGGXXFXXAXXXKXGSLXPPXKXGGXLXXPPXKXXXXXPXPX 648
P PPPP GG GG G L PP G PP P P
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPP----PPPPPGGL-PPISGGPPPPPPPPGGCPPPPPPP 775
Query: 649 XXGXXX--PPPPP 681
G PPPPP
Sbjct: 776 PPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.23
Identities = 21/66 (31%), Positives = 21/66 (31%)
Frame = +2
Query: 482 PPPPXKKXGXFXXXGGGXFXPGXXXXKXGXXXPXKXGGGXXXPPPXKXXXXXPPPXXXGX 661
PPPP G GG P G P G PPP PPP G
Sbjct: 726 PPPPPPPGGLPPITGGPPPPP-----PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
Query: 662 XXPPPP 679
PPP
Sbjct: 781 KGGPPP 786
Score = 32.7 bits (71), Expect = 0.30
Identities = 24/73 (32%), Positives = 24/73 (32%), Gaps = 2/73 (2%)
Frame = +1
Query: 469 PXXXXPPPPXKXGGXLXXXGGXXFXXAXXXKXGSLXPPXKXGGXLXXPPXKXXXXXPXPX 648
P PPPP GG GG G L PP G PP P P
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPP----PPPPPGGL-PPISGGPPPPPPPPGGCPPPPPPP 775
Query: 649 XXGXXX--PPPPP 681
G PPPPP
Sbjct: 776 PPGGFKGGPPPPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.23
Identities = 21/66 (31%), Positives = 21/66 (31%)
Frame = +2
Query: 482 PPPPXKKXGXFXXXGGGXFXPGXXXXKXGXXXPXKXGGGXXXPPPXKXXXXXPPPXXXGX 661
PPPP G GG P G P G PPP PPP G
Sbjct: 309 PPPPPPPGGLPPITGGPPPPP-----PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 363
Query: 662 XXPPPP 679
PPP
Sbjct: 364 KGGPPP 369
Score = 32.7 bits (71), Expect = 0.30
Identities = 24/73 (32%), Positives = 24/73 (32%), Gaps = 2/73 (2%)
Frame = +1
Query: 469 PXXXXPPPPXKXGGXLXXXGGXXFXXAXXXKXGSLXPPXKXGGXLXXPPXKXXXXXPXPX 648
P PPPP GG GG G L PP G PP P P
Sbjct: 304 PITGGPPPPPPPGGLPPITGGPP----PPPPPGGL-PPISGGPPPPPPPPGGCPPPPPPP 358
Query: 649 XXGXXX--PPPPP 681
G PPPPP
Sbjct: 359 PPGGFKGGPPPPP 371
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.7 bits (71), Expect = 0.30
Identities = 22/74 (29%), Positives = 23/74 (31%), Gaps = 4/74 (5%)
Frame = +2
Query: 470 PXXXPPPPXKKXGXFXXXGGGXFXPGXXXXKXGXXXPXKXGGGXXXP----PPXKXXXXX 637
P PPPP G G G P G P + G P PP
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPP---PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 289
Query: 638 PPPXXXGXXXPPPP 679
PPP PPPP
Sbjct: 290 PPPRAGSPPPPPPP 303
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/70 (31%), Positives = 23/70 (32%), Gaps = 4/70 (5%)
Frame = +1
Query: 484 PPPPXKXGGXLXXXGGXXFXXAXXX----KXGSLXPPXKXGGXLXXPPXKXXXXXPXPXX 651
PPPP K L G A + GS PP PP P P
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS-----PPPPPAGGSPPPPR 293
Query: 652 XGXXXPPPPP 681
G PPPPP
Sbjct: 294 AGSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.7 bits (71), Expect = 0.30
Identities = 22/74 (29%), Positives = 23/74 (31%), Gaps = 4/74 (5%)
Frame = +2
Query: 470 PXXXPPPPXKKXGXFXXXGGGXFXPGXXXXKXGXXXPXKXGGGXXXP----PPXKXXXXX 637
P PPPP G G G P G P + G P PP
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPP---PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 310
Query: 638 PPPXXXGXXXPPPP 679
PPP PPPP
Sbjct: 311 PPPRAGSPPPPPPP 324
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/70 (31%), Positives = 23/70 (32%), Gaps = 4/70 (5%)
Frame = +1
Query: 484 PPPPXKXGGXLXXXGGXXFXXAXXX----KXGSLXPPXKXGGXLXXPPXKXXXXXPXPXX 651
PPPP K L G A + GS PP PP P P
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS-----PPPPPAGGSPPPPR 314
Query: 652 XGXXXPPPPP 681
G PPPPP
Sbjct: 315 AGSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.7 bits (71), Expect = 0.30
Identities = 22/74 (29%), Positives = 23/74 (31%), Gaps = 4/74 (5%)
Frame = +2
Query: 470 PXXXPPPPXKKXGXFXXXGGGXFXPGXXXXKXGXXXPXKXGGGXXXP----PPXKXXXXX 637
P PPPP G G G P G P + G P PP
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPP---PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 295
Query: 638 PPPXXXGXXXPPPP 679
PPP PPPP
Sbjct: 296 PPPRAGSPPPPPPP 309
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/70 (31%), Positives = 23/70 (32%), Gaps = 4/70 (5%)
Frame = +1
Query: 484 PPPPXKXGGXLXXXGGXXFXXAXXX----KXGSLXPPXKXGGXLXXPPXKXXXXXPXPXX 651
PPPP K L G A + GS PP PP P P
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS-----PPPPPAGGSPPPPR 299
Query: 652 XGXXXPPPPP 681
G PPPPP
Sbjct: 300 AGSPPPPPPP 309
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.1 bits (67), Expect = 0.91
Identities = 21/73 (28%), Positives = 23/73 (31%), Gaps = 3/73 (4%)
Frame = +2
Query: 470 PXXXPPPPXKKXGXFXXXGGGXFXPGXXXXKX--GXXXPXKXG-GGXXXPPPXKXXXXXP 640
P PPP G G + P G P + G GG PPP P
Sbjct: 387 PGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGP 446
Query: 641 PPXXXGXXXPPPP 679
PP PPP
Sbjct: 447 PPTGFPPVGAPPP 459
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/66 (25%), Positives = 18/66 (27%)
Frame = +2
Query: 482 PPPPXKKXGXFXXXGGGXFXPGXXXXKXGXXXPXKXGGGXXXPPPXKXXXXXPPPXXXGX 661
PPPP + G P G P G PPP G
Sbjct: 44 PPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGT 103
Query: 662 XXPPPP 679
PPPP
Sbjct: 104 GTPPPP 109
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/66 (27%), Positives = 18/66 (27%)
Frame = +1
Query: 484 PPPPXKXGGXLXXXGGXXFXXAXXXKXGSLXPPXKXGGXLXXPPXKXXXXXPXPXXXGXX 663
PPPP L G K PP G P P G
Sbjct: 138 PPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTG 197
Query: 664 XPPPPP 681
PPPPP
Sbjct: 198 TPPPPP 203
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/66 (27%), Positives = 18/66 (27%)
Frame = +1
Query: 484 PPPPXKXGGXLXXXGGXXFXXAXXXKXGSLXPPXKXGGXLXXPPXKXXXXXPXPXXXGXX 663
PPPP L G K PP G P P G
Sbjct: 107 PPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTG 166
Query: 664 XPPPPP 681
PPPPP
Sbjct: 167 SPPPPP 172
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 678 GGGGXXXPXXXGGGXXXXXFXGGGXXXPPP 589
GGGG GGG GGG PPP
Sbjct: 28 GGGGCGGGCGGGGGCGGGGGCGGGCAPPPP 57
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = +1
Query: 559 KXGSLXPPXKXGGXLXXPPXKXXXXXPXPXXXGXXXPPPP 678
+ G+ PP + G L PP K P G PP P
Sbjct: 130 RPGNPGPPGRDGALLPGPPPKPPCQKCPPGPPGPAGPPGP 169
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 590 GGGXXXPPPXKXXXXXPPPXXXGXXXPPPP 679
GGG P PPP G PPPP
Sbjct: 26 GGGGGGCAPAAPACAPPPPPMCGCAPPPPP 55
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 608 PPPXKXXXXXPPPXXXGXXXPPP 676
PPP + PPP G PPP
Sbjct: 297 PPPPRGHFPPPPPHFMGRGMPPP 319
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 608 PPPXKXXXXXPPPXXXGXXXPPP 676
PPP + PPP G PPP
Sbjct: 297 PPPPRGHFPPPPPHFMGRGMPPP 319
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,800,967
Number of Sequences: 27780
Number of extensions: 346471
Number of successful extensions: 1351
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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