Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_K22
(994 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1136 + 24218601-24218734,24218769-24219906 33 0.35
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 0.45
07_03_1140 - 24258627-24258849,24259967-24260089,24260200-242609... 26 0.64
07_01_0479 + 3606663-3607448 31 1.1
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.1
09_02_0603 - 11150739-11150746,11150791-11151340 31 1.4
08_01_0600 - 5262573-5262773,5262850-5262952,5263050-5263180,526... 31 1.4
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 30 3.3
09_04_0684 - 19442335-19442990,19443774-19443839,19443935-194440... 29 4.4
06_03_1172 - 28147957-28148274,28149362-28149877 29 4.4
02_04_0382 - 22501041-22501279,22501717-22501810 29 5.8
01_01_0534 + 3920356-3920867,3921141-3922134 29 5.8
01_01_0533 + 3917101-3917603,3918312-3919305 29 5.8
07_01_0080 + 587674-588510 29 7.6
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 33.1 bits (72), Expect = 0.35
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = -1
Query: 649 GGGXPPXXXGGGXXXAPKKXXGGXXFFXXRKKIXXXGGGXXXVFXXPPXXXGG 491
GG PP GGG AP++ GG GGG PP GG
Sbjct: 128 GGARPPAPGGGGGGGAPRRVLGGGG--GGGALARPPGGGRGGALGRPPGGGGG 178
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.1 bits (62), Expect = 5.8
Identities = 25/79 (31%), Positives = 26/79 (32%)
Frame = +2
Query: 614 PPPXXXXGXPPPPXGGFFXGXKKXXXXXXXXXXKKXGGGGXPPXKKXXPPXXKXFFFXXX 793
PPP G PPPP G G + G GG PP PP
Sbjct: 1113 PPPGGITGVPPPPPIGGLGGHQAPPAPPL-----PEGIGGVPP-----PPPVGGL----- 1157
Query: 794 GGGXPXXPPPXFXXPXXPP 850
GG P PPP PP
Sbjct: 1158 -GGPPAPPPPAGFRGGTPP 1175
Score = 28.7 bits (61), Expect = 7.6
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 5/31 (16%)
Frame = +3
Query: 582 PPXXFLGAXXXPPPXXXGG-----XPPPXGG 659
PP +GA PPP GG PPP GG
Sbjct: 1099 PPPPSIGAGAPPPPPPPGGITGVPPPPPIGG 1129
Score = 27.1 bits (57), Expect(2) = 0.45
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 727 GGXPPPXKXXXPPXKXFFFXXXGGGXPPXPPP 822
GG P P PP + GG PP PPP
Sbjct: 1057 GGAPSPPSPP-PPQRENTSVGIQGGIPPLPPP 1087
Score = 24.2 bits (50), Expect(2) = 0.45
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 796 GGXPPXPPPXFXXPXXPPP 852
G PP PPP PPP
Sbjct: 1107 GAPPPPPPPGGITGVPPPP 1125
>07_03_1140 -
24258627-24258849,24259967-24260089,24260200-24260921,
24260945-24261073,24261484-24261714
Length = 475
Score = 26.2 bits (55), Expect(2) = 0.64
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +1
Query: 598 WXPXXXPPXXXXGGXPPPXGGXFXXXKKXXXXXXFXXXKKXGGGGXPPP 744
W P PP GG P + F GGGG PPP
Sbjct: 16 WGPPQPPPST--GGGIPQLPAAAAAPVEGLLDAPFSSSSGGGGGGWPPP 62
Score = 24.6 bits (51), Expect(2) = 0.64
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 793 GGGXPPXPPP 822
GGG PP PPP
Sbjct: 56 GGGWPPPPPP 65
>07_01_0479 + 3606663-3607448
Length = 261
Score = 31.5 bits (68), Expect = 1.1
Identities = 20/61 (32%), Positives = 21/61 (34%)
Frame = +3
Query: 468 PPQKXKXXPPXXXGGXKKTLXXPPPXXKIFFLXXKKXXPPXXFLGAXXXPPPXXXGGXPP 647
P Q+ PP GG PPP F PP G PPP G PP
Sbjct: 186 PFQRPPGVPPAFPGG-------PPPPPGPFMRGPPPMGPPQVRPGMPGGPPPGMRPGMPP 238
Query: 648 P 650
P
Sbjct: 239 P 239
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.5 bits (68), Expect = 1.1
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +1
Query: 736 PPPXKXXXPPXKXFFFXXXGGGXPPXPPPXFXXPXXPPP 852
PPP K PP G PP PPP P PPP
Sbjct: 338 PPPPKGPPPPPP-------AKGPPPPPPPKGPSPPPPPP 369
Score = 29.1 bits (62), Expect = 5.8
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +1
Query: 730 GXPPPXKXXXPPXKXFFFXXXGGGXPPXPPPXFXXPXXPPP 852
G PPP PP G PP PPP PPP
Sbjct: 343 GPPPPPPAKGPPPPP---PPKGPSPPPPPPPGGKKGGPPPP 380
>09_02_0603 - 11150739-11150746,11150791-11151340
Length = 185
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +3
Query: 534 PPPXXKIFFLXXKKXXPPXXFLGAXXXPPPXXXGGXPPPXGG 659
PPP F + PP LG+ PPP PPP G
Sbjct: 46 PPPPGSTFVPLPQSGVPPPPPLGSFFVPPPQSRVPPPPPQLG 87
>08_01_0600 -
5262573-5262773,5262850-5262952,5263050-5263180,
5263263-5263312,5265266-5265725,5266349-5266708
Length = 434
Score = 31.1 bits (67), Expect = 1.4
Identities = 20/69 (28%), Positives = 25/69 (36%)
Frame = +3
Query: 459 GGAPPQKXKXXPPXXXGGXKKTLXXPPPXXKIFFLXXKKXXPPXXFLGAXXXPPPXXXGG 638
GGAPPQ PP ++ PPP + + PP G PP G
Sbjct: 16 GGAPPQWGAIPPPVPH--QQQQYAPPPPQ-----MWGQAPPPPPQMWGQAPPPPQPAYGQ 68
Query: 639 XPPPXGGXF 665
PP G +
Sbjct: 69 PPPAQAGYY 77
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.9 bits (64), Expect = 3.3
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Frame = +1
Query: 736 PPPXKXXXPPXKXFFFXXXG---GGXPPXPPPXFXXPXXPPP 852
PPP PP + F G PP PP + P PPP
Sbjct: 56 PPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPP 97
Score = 28.7 bits (61), Expect = 7.6
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +1
Query: 736 PPPXKXXXPPXKXFFFXXXGGGXPPXPPPXFXXPXXPPP 852
PPP PP + PP PPP P PP
Sbjct: 84 PPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPP 122
Score = 28.7 bits (61), Expect = 7.6
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +1
Query: 736 PPPXKXXXPPXKXFFFXXXGGGXPPXPPPXFXXPXXPPP 852
PP PP + PP PPP P PPP
Sbjct: 85 PPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPP 123
>09_04_0684 -
19442335-19442990,19443774-19443839,19443935-19444032,
19444787-19445157
Length = 396
Score = 29.5 bits (63), Expect = 4.4
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +1
Query: 721 GGGGXPPPXKXXXPPXKXFFFXXXGGGXPPXPPPXFXXPXXPP 849
G PPP + PP G PP PPP P P
Sbjct: 244 GFNSPPPPGQGPVPPRDAPPMHHAQGNVPPPPPPNAGPPNYQP 286
>06_03_1172 - 28147957-28148274,28149362-28149877
Length = 277
Score = 29.5 bits (63), Expect = 4.4
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +1
Query: 721 GGGGXPPPXKXXXPPXKXFFFXXXGGGXPPXPPPXFXXPXXPP 849
G GG PP PP + F PP PP P PP
Sbjct: 5 GAGGGAPPPPPPSPP-SVYPFLPPATFIPPPPPAATAEPYAPP 46
>02_04_0382 - 22501041-22501279,22501717-22501810
Length = 110
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +1
Query: 736 PPPXKXXXPPXKXFFFXXXGGGXPPXPPP 822
PP PP ++ G G PP PPP
Sbjct: 75 PPSPDYYDPPPSPYYGGGGGYGKPPPPPP 103
>01_01_0534 + 3920356-3920867,3921141-3922134
Length = 501
Score = 29.1 bits (62), Expect = 5.8
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 35 HLGW-ALPWGIRLGPGALPWVHLT**FLGYRLVVNPSEXGGTXLGLKVXTKW 187
H GW + GI G + W H FL +LVV+ + G +G+K T+W
Sbjct: 380 HCGWNSTIEGICAGVPMITWPHFAEQFLNEKLVVDHLKI-GMEVGVKGVTQW 430
>01_01_0533 + 3917101-3917603,3918312-3919305
Length = 498
Score = 29.1 bits (62), Expect = 5.8
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 35 HLGW-ALPWGIRLGPGALPWVHLT**FLGYRLVVNPSEXGGTXLGLKVXTKW 187
H GW + GI G + W H + F+ +LVV+ + G +G+K T+W
Sbjct: 377 HCGWNSTLEGISAGVPMITWPHCSEQFVNEKLVVDHLKI-GVEVGVKGVTQW 427
>07_01_0080 + 587674-588510
Length = 278
Score = 28.7 bits (61), Expect = 7.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 799 GXPPXPPPXFXXPXXPPPXXXF 864
G PP PPP P PPP F
Sbjct: 102 GSPPPPPPPPPPPPPPPPPPLF 123
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,809,335
Number of Sequences: 37544
Number of extensions: 621687
Number of successful extensions: 3040
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2645
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2905255520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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