Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_K19
(793 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X75910-1|CAA53509.1| 921|Drosophila melanogaster beta-adaptin D... 32 1.0
BT016054-1|AAV36939.1| 921|Drosophila melanogaster LP17054p pro... 32 1.0
AY052092-1|AAK93516.1| 600|Drosophila melanogaster SD04106p pro... 32 1.0
AE014298-2924|AAF49013.1| 921|Drosophila melanogaster CG12532-P... 32 1.0
AY131211-1|AAM97280.1| 608|Drosophila melanogaster scaffold pro... 30 3.2
AY069429-1|AAL39574.1| 479|Drosophila melanogaster LD13887p pro... 30 3.2
AE014297-3264|AAF56090.3| 608|Drosophila melanogaster CG33193-P... 30 3.2
AE014296-1669|AAF50260.2| 783|Drosophila melanogaster CG32043-P... 30 3.2
AE014296-1668|AAF50261.2| 783|Drosophila melanogaster CG32043-P... 30 3.2
U31368-1|AAA92297.1| 2527|Drosophila melanogaster transcription ... 29 5.5
L42311-1|AAA98814.1| 2529|Drosophila melanogaster zinc finger pr... 29 5.5
AY075429-1|AAL68245.1| 1384|Drosophila melanogaster LD47780p pro... 29 5.5
AL031227-2|CAA20226.1| 958|Drosophila melanogaster EG:66A1.3 pr... 29 5.5
AE014135-123|AAX52511.1| 1384|Drosophila melanogaster CG31992-PH... 29 5.5
AE014135-122|AAX52510.1| 1384|Drosophila melanogaster CG31992-PG... 29 5.5
AE014135-121|AAN06509.1| 1384|Drosophila melanogaster CG31992-PF... 29 5.5
AE014135-120|AAN06508.1| 1384|Drosophila melanogaster CG31992-PE... 29 5.5
AE014135-119|AAN06507.1| 1384|Drosophila melanogaster CG31992-PD... 29 5.5
AE014135-118|AAF59324.2| 1384|Drosophila melanogaster CG31992-PC... 29 5.5
AE014135-117|AAF59322.2| 1384|Drosophila melanogaster CG31992-PB... 29 5.5
AE014135-116|AAF59323.2| 1384|Drosophila melanogaster CG31992-PA... 29 5.5
AE013599-1219|AAF58712.1| 2532|Drosophila melanogaster CG7734-PC... 29 5.5
AE013599-1218|AAF58713.1| 2532|Drosophila melanogaster CG7734-PB... 29 5.5
AE013599-1217|AAM68718.1| 2532|Drosophila melanogaster CG7734-PA... 29 5.5
AE013599-1216|AAS64914.1| 2577|Drosophila melanogaster CG7734-PD... 29 5.5
AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ... 29 7.3
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA... 29 7.3
D21203-1|BAA04745.2| 1408|Drosophila melanogaster large Forked p... 29 9.6
D17528-1|BAA04479.1| 604|Drosophila melanogaster small forked p... 29 9.6
AL031227-1|CAA20225.1| 1306|Drosophila melanogaster EG:66A1.2 pr... 29 9.6
>X75910-1|CAA53509.1| 921|Drosophila melanogaster beta-adaptin
Drosophila 1 protein.
Length = 921
Score = 31.9 bits (69), Expect = 1.0
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Frame = +2
Query: 281 GTETKSNSVTVQSL--PNVSSIIKGYRDAYLVDLEAVVFPSAPSLKIPVTVDLCWTTADV 454
G E N+ +++ PN S+I D +D+ A PSAP+ VDL D+
Sbjct: 604 GAEQAENAAGSEAMVIPNQESLIG---DLLSMDINAPAMPSAPAATS--NVDLLGGGLDI 658
Query: 455 TVGGVNVLATPSSSRITIGGLALMHQATL 541
+GG A P + +G + + ATL
Sbjct: 659 LLGGPPAEAAPGGATSLLGDIFGLGGATL 687
>BT016054-1|AAV36939.1| 921|Drosophila melanogaster LP17054p
protein.
Length = 921
Score = 31.9 bits (69), Expect = 1.0
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Frame = +2
Query: 281 GTETKSNSVTVQSL--PNVSSIIKGYRDAYLVDLEAVVFPSAPSLKIPVTVDLCWTTADV 454
G E N+ +++ PN S+I D +D+ A PSAP+ VDL D+
Sbjct: 604 GAEQAENAAGSEAMVIPNQESLIG---DLLSMDINAPAMPSAPAATS--NVDLLGGGLDI 658
Query: 455 TVGGVNVLATPSSSRITIGGLALMHQATL 541
+GG A P + +G + + ATL
Sbjct: 659 LLGGPPAEAAPGGATSLLGDIFGLGGATL 687
>AY052092-1|AAK93516.1| 600|Drosophila melanogaster SD04106p
protein.
Length = 600
Score = 31.9 bits (69), Expect = 1.0
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Frame = +2
Query: 281 GTETKSNSVTVQSL--PNVSSIIKGYRDAYLVDLEAVVFPSAPSLKIPVTVDLCWTTADV 454
G E N+ +++ PN S+I D +D+ A PSAP+ VDL D+
Sbjct: 283 GAEQAENAAGSEAMVIPNQESLIG---DLLSMDINAPAMPSAPAATS--NVDLLGGGLDI 337
Query: 455 TVGGVNVLATPSSSRITIGGLALMHQATL 541
+GG A P + +G + + ATL
Sbjct: 338 LLGGPPAEAAPGGATSLLGDIFGLGGATL 366
>AE014298-2924|AAF49013.1| 921|Drosophila melanogaster CG12532-PA
protein.
Length = 921
Score = 31.9 bits (69), Expect = 1.0
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Frame = +2
Query: 281 GTETKSNSVTVQSL--PNVSSIIKGYRDAYLVDLEAVVFPSAPSLKIPVTVDLCWTTADV 454
G E N+ +++ PN S+I D +D+ A PSAP+ VDL D+
Sbjct: 604 GAEQAENAAGSEAMVIPNQESLIG---DLLSMDINAPAMPSAPAATS--NVDLLGGGLDI 658
Query: 455 TVGGVNVLATPSSSRITIGGLALMHQATL 541
+GG A P + +G + + ATL
Sbjct: 659 LLGGPPAEAAPGGATSLLGDIFGLGGATL 687
>AY131211-1|AAM97280.1| 608|Drosophila melanogaster scaffold
protein salvador protein.
Length = 608
Score = 30.3 bits (65), Expect = 3.2
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 499 HYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQTTPDLTS-ISINPLNARTRRSSAPGLK 675
H + S P+ S HP +RS P HQ S +Q + + ++ ++ + R+ S+P L
Sbjct: 109 HSHPHSLPHPS-HPHVRSHPPLPPHQFRASSNQLSQNSSNYVNFEQIERMRRQQSSP-LL 166
Query: 676 PPLSSXAPSA 705
SS AP A
Sbjct: 167 QTTSSPAPGA 176
>AY069429-1|AAL39574.1| 479|Drosophila melanogaster LD13887p
protein.
Length = 479
Score = 30.3 bits (65), Expect = 3.2
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = +1
Query: 454 HSWRSQCAGHPFILPHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQT 600
H+ S P LPH+ P SSHP L+ H P HQT
Sbjct: 345 HAQHSHPHTLPHSLPHHLQPGTPTRSSHPQLQHPHHYPPSPHSHPHHQT 393
>AE014297-3264|AAF56090.3| 608|Drosophila melanogaster CG33193-PA
protein.
Length = 608
Score = 30.3 bits (65), Expect = 3.2
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 499 HYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQTTPDLTS-ISINPLNARTRRSSAPGLK 675
H + S P+ S HP +RS P HQ S +Q + + ++ ++ + R+ S+P L
Sbjct: 109 HSHPHSLPHPS-HPHVRSHPPLPPHQFRASSNQLSQNSSNYVNFEQIERMRRQQSSP-LL 166
Query: 676 PPLSSXAPSA 705
SS AP A
Sbjct: 167 QTTSSPAPGA 176
>AE014296-1669|AAF50260.2| 783|Drosophila melanogaster CG32043-PB,
isoform B protein.
Length = 783
Score = 30.3 bits (65), Expect = 3.2
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = +1
Query: 454 HSWRSQCAGHPFILPHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQT 600
H+ S P LPH+ P SSHP L+ H P HQT
Sbjct: 649 HAQHSHPHTLPHSLPHHLQPGTPTRSSHPQLQHPHHYPPSPHSHPHHQT 697
>AE014296-1668|AAF50261.2| 783|Drosophila melanogaster CG32043-PA,
isoform A protein.
Length = 783
Score = 30.3 bits (65), Expect = 3.2
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = +1
Query: 454 HSWRSQCAGHPFILPHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQT 600
H+ S P LPH+ P SSHP L+ H P HQT
Sbjct: 649 HAQHSHPHTLPHSLPHHLQPGTPTRSSHPQLQHPHHYPPSPHSHPHHQT 697
>U31368-1|AAA92297.1| 2527|Drosophila melanogaster transcription
factor protein.
Length = 2527
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 619 ISINPLNARTRRSSAPGLKPPLSSXAPSA---YLTPSSLGMAKGGFAP 753
+ + PL+ T +AP P++S + SA +L P+SL + G F P
Sbjct: 1516 LPLTPLHVDTPNGNAPEETSPVASASASAKSKFLRPTSLPLKPGTFTP 1563
>L42311-1|AAA98814.1| 2529|Drosophila melanogaster zinc finger protein
protein.
Length = 2529
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 619 ISINPLNARTRRSSAPGLKPPLSSXAPSA---YLTPSSLGMAKGGFAP 753
+ + PL+ T +AP P++S + SA +L P+SL + G F P
Sbjct: 1520 LPLTPLHVDTPNGNAPEETSPVASASASAKSKFLRPTSLPLKPGTFTP 1567
>AY075429-1|AAL68245.1| 1384|Drosophila melanogaster LD47780p protein.
Length = 1384
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 565 PDHQIPDSIHQTTPDLTSISINPLNARTRRSSAPGLKPPLSSXAPSAYLTPSSL-GMAKG 741
P H D+ Q T + + +PLN + R PGL + A S TP+++ G A G
Sbjct: 1033 PSHSWSDNSQQCTAT-SELWTSPLNKSSSRGPPPGLTANSNKSANSNASTPTTITGGANG 1091
Query: 742 GFAP 753
P
Sbjct: 1092 WLQP 1095
>AL031227-2|CAA20226.1| 958|Drosophila melanogaster EG:66A1.3
protein.
Length = 958
Score = 29.5 bits (63), Expect = 5.5
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +1
Query: 514 SRPYASSHPPLRSRLHQPDHQIPDSIHQTTPDLTSISINPLNARTRRSSAPGLKPPLSSX 693
SRP S H R R DH+ PD + L +S++PL ++ S K ++
Sbjct: 74 SRP-ESGH---RRRTKSSDHRSPDERGEAKEQLRELSVSPLPSKHNISQFTSPKSEVTQT 129
Query: 694 APSAY 708
P+ Y
Sbjct: 130 KPNEY 134
>AE014135-123|AAX52511.1| 1384|Drosophila melanogaster CG31992-PH,
isoform H protein.
Length = 1384
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 565 PDHQIPDSIHQTTPDLTSISINPLNARTRRSSAPGLKPPLSSXAPSAYLTPSSL-GMAKG 741
P H D+ Q T + + +PLN + R PGL + A S TP+++ G A G
Sbjct: 1033 PSHSWSDNSQQCTAT-SELWTSPLNKSSSRGPPPGLTANSNKSANSNASTPTTITGGANG 1091
Query: 742 GFAP 753
P
Sbjct: 1092 WLQP 1095
>AE014135-122|AAX52510.1| 1384|Drosophila melanogaster CG31992-PG,
isoform G protein.
Length = 1384
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 565 PDHQIPDSIHQTTPDLTSISINPLNARTRRSSAPGLKPPLSSXAPSAYLTPSSL-GMAKG 741
P H D+ Q T + + +PLN + R PGL + A S TP+++ G A G
Sbjct: 1033 PSHSWSDNSQQCTAT-SELWTSPLNKSSSRGPPPGLTANSNKSANSNASTPTTITGGANG 1091
Query: 742 GFAP 753
P
Sbjct: 1092 WLQP 1095
>AE014135-121|AAN06509.1| 1384|Drosophila melanogaster CG31992-PF,
isoform F protein.
Length = 1384
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 565 PDHQIPDSIHQTTPDLTSISINPLNARTRRSSAPGLKPPLSSXAPSAYLTPSSL-GMAKG 741
P H D+ Q T + + +PLN + R PGL + A S TP+++ G A G
Sbjct: 1033 PSHSWSDNSQQCTAT-SELWTSPLNKSSSRGPPPGLTANSNKSANSNASTPTTITGGANG 1091
Query: 742 GFAP 753
P
Sbjct: 1092 WLQP 1095
>AE014135-120|AAN06508.1| 1384|Drosophila melanogaster CG31992-PE,
isoform E protein.
Length = 1384
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 565 PDHQIPDSIHQTTPDLTSISINPLNARTRRSSAPGLKPPLSSXAPSAYLTPSSL-GMAKG 741
P H D+ Q T + + +PLN + R PGL + A S TP+++ G A G
Sbjct: 1033 PSHSWSDNSQQCTAT-SELWTSPLNKSSSRGPPPGLTANSNKSANSNASTPTTITGGANG 1091
Query: 742 GFAP 753
P
Sbjct: 1092 WLQP 1095
>AE014135-119|AAN06507.1| 1384|Drosophila melanogaster CG31992-PD,
isoform D protein.
Length = 1384
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 565 PDHQIPDSIHQTTPDLTSISINPLNARTRRSSAPGLKPPLSSXAPSAYLTPSSL-GMAKG 741
P H D+ Q T + + +PLN + R PGL + A S TP+++ G A G
Sbjct: 1033 PSHSWSDNSQQCTAT-SELWTSPLNKSSSRGPPPGLTANSNKSANSNASTPTTITGGANG 1091
Query: 742 GFAP 753
P
Sbjct: 1092 WLQP 1095
>AE014135-118|AAF59324.2| 1384|Drosophila melanogaster CG31992-PC,
isoform C protein.
Length = 1384
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 565 PDHQIPDSIHQTTPDLTSISINPLNARTRRSSAPGLKPPLSSXAPSAYLTPSSL-GMAKG 741
P H D+ Q T + + +PLN + R PGL + A S TP+++ G A G
Sbjct: 1033 PSHSWSDNSQQCTAT-SELWTSPLNKSSSRGPPPGLTANSNKSANSNASTPTTITGGANG 1091
Query: 742 GFAP 753
P
Sbjct: 1092 WLQP 1095
>AE014135-117|AAF59322.2| 1384|Drosophila melanogaster CG31992-PB,
isoform B protein.
Length = 1384
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 565 PDHQIPDSIHQTTPDLTSISINPLNARTRRSSAPGLKPPLSSXAPSAYLTPSSL-GMAKG 741
P H D+ Q T + + +PLN + R PGL + A S TP+++ G A G
Sbjct: 1033 PSHSWSDNSQQCTAT-SELWTSPLNKSSSRGPPPGLTANSNKSANSNASTPTTITGGANG 1091
Query: 742 GFAP 753
P
Sbjct: 1092 WLQP 1095
>AE014135-116|AAF59323.2| 1384|Drosophila melanogaster CG31992-PA,
isoform A protein.
Length = 1384
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 565 PDHQIPDSIHQTTPDLTSISINPLNARTRRSSAPGLKPPLSSXAPSAYLTPSSL-GMAKG 741
P H D+ Q T + + +PLN + R PGL + A S TP+++ G A G
Sbjct: 1033 PSHSWSDNSQQCTAT-SELWTSPLNKSSSRGPPPGLTANSNKSANSNASTPTTITGGANG 1091
Query: 742 GFAP 753
P
Sbjct: 1092 WLQP 1095
>AE013599-1219|AAF58712.1| 2532|Drosophila melanogaster CG7734-PC,
isoform C protein.
Length = 2532
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 619 ISINPLNARTRRSSAPGLKPPLSSXAPSA---YLTPSSLGMAKGGFAP 753
+ + PL+ T +AP P++S + SA +L P+SL + G F P
Sbjct: 1521 LPLTPLHVDTPNGNAPEETSPVASASASAKSKFLRPTSLPLKPGTFTP 1568
>AE013599-1218|AAF58713.1| 2532|Drosophila melanogaster CG7734-PB,
isoform B protein.
Length = 2532
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 619 ISINPLNARTRRSSAPGLKPPLSSXAPSA---YLTPSSLGMAKGGFAP 753
+ + PL+ T +AP P++S + SA +L P+SL + G F P
Sbjct: 1521 LPLTPLHVDTPNGNAPEETSPVASASASAKSKFLRPTSLPLKPGTFTP 1568
>AE013599-1217|AAM68718.1| 2532|Drosophila melanogaster CG7734-PA,
isoform A protein.
Length = 2532
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 619 ISINPLNARTRRSSAPGLKPPLSSXAPSA---YLTPSSLGMAKGGFAP 753
+ + PL+ T +AP P++S + SA +L P+SL + G F P
Sbjct: 1521 LPLTPLHVDTPNGNAPEETSPVASASASAKSKFLRPTSLPLKPGTFTP 1568
>AE013599-1216|AAS64914.1| 2577|Drosophila melanogaster CG7734-PD,
isoform D protein.
Length = 2577
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 619 ISINPLNARTRRSSAPGLKPPLSSXAPSA---YLTPSSLGMAKGGFAP 753
+ + PL+ T +AP P++S + SA +L P+SL + G F P
Sbjct: 1566 LPLTPLHVDTPNGNAPEETSPVASASASAKSKFLRPTSLPLKPGTFTP 1613
>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
initiation factoreIF4G protein.
Length = 1666
Score = 29.1 bits (62), Expect = 7.3
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +1
Query: 232 SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 357
S TF F PVL+ Y N+ Q C T + L+H PR
Sbjct: 1572 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1612
>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
protein.
Length = 1345
Score = 29.1 bits (62), Expect = 7.3
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +1
Query: 232 SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 357
S TF F PVL+ Y N+ Q C T + L+H PR
Sbjct: 1251 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1291
>D21203-1|BAA04745.2| 1408|Drosophila melanogaster large Forked
protein protein.
Length = 1408
Score = 28.7 bits (61), Expect = 9.6
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 534 PPSPAISATSTRSSNPRFHTPNHPRLNIHFHQSPERPY 647
PP+P I T+ R +P P+ + + H H P P+
Sbjct: 1005 PPAPRIRRTTCRYRSPSSRHPHQHQHHPHPHPHPHHPH 1042
>D17528-1|BAA04479.1| 604|Drosophila melanogaster small forked
protein protein.
Length = 604
Score = 28.7 bits (61), Expect = 9.6
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 534 PPSPAISATSTRSSNPRFHTPNHPRLNIHFHQSPERPY 647
PP+P I T+ R +P P+ + + H H P P+
Sbjct: 204 PPAPRIRRTTCRYRSPSSRHPHQHQHHPHPHPHPHHPH 241
>AL031227-1|CAA20225.1| 1306|Drosophila melanogaster EG:66A1.2
protein.
Length = 1306
Score = 28.7 bits (61), Expect = 9.6
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +1
Query: 514 SRPYASSHPPLRSRLHQPDHQIPDSIHQTTPDLTSISINPLNARTRRSSAPGLKPPLSSX 693
SRP S H R R DH+ PD + L +S++P ++ R S K ++
Sbjct: 82 SRP-ESGH---RRRTKSSDHRSPDERGEAKEQLRELSVSPPPSKHRISQFTSPKSEVTQT 137
Query: 694 APSAY 708
P+ Y
Sbjct: 138 KPNEY 142
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,060,274
Number of Sequences: 53049
Number of extensions: 847651
Number of successful extensions: 3080
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3069
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3675273108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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