Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_K02
         (824 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    30   1.7  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    30   1.7  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    30   1.7  
Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical pr...    30   2.3  
Z68131-1|CAA92217.1|  467|Caenorhabditis elegans Hypothetical pr...    29   4.0  
AC024763-6|AAO12403.1|  603|Caenorhabditis elegans Calpain famil...    29   5.3  
AC024763-5|AAO12402.1|  716|Caenorhabditis elegans Calpain famil...    29   5.3  
U28739-11|AAR25657.1|  487|Caenorhabditis elegans Hypothetical p...    28   7.1  
U28739-10|AAR25656.1|  683|Caenorhabditis elegans Hypothetical p...    28   7.1  
Z78064-1|CAB01509.1|  313|Caenorhabditis elegans Hypothetical pr...    28   9.3  
Z46787-10|CAA86749.1|  154|Caenorhabditis elegans Hypothetical p...    28   9.3  
Z35719-1|CAA84800.1|  296|Caenorhabditis elegans Hypothetical pr...    28   9.3  

>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 14/37 (37%), Positives = 14/37 (37%)
 Frame = +2

Query: 506 GXPXWXXPXAGXXTXXGGPPGXPXXXXGPXPXXPPXP 616
           G P    P  G     GGPP  P    G  P  PP P
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 14/37 (37%), Positives = 14/37 (37%)
 Frame = +2

Query: 506 GXPXWXXPXAGXXTXXGGPPGXPXXXXGPXPXXPPXP 616
           G P    P  G     GGPP  P    G  P  PP P
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 14/37 (37%), Positives = 14/37 (37%)
 Frame = +2

Query: 506 GXPXWXXPXAGXXTXXGGPPGXPXXXXGPXPXXPPXP 616
           G P    P  G     GGPP  P    G  P  PP P
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359


>Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical
           protein F28D9.1 protein.
          Length = 601

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +3

Query: 207 KKNLNRSTSISATP*PARTSPRCDVRSARSR-SGRSEDTAPSPSRRRACSPGRHPGTWR 380
           ++  + S S S  P P R   R     AR R S  +  + P+P RRR+ S  R P   R
Sbjct: 346 RRRRSPSASKSPPPAPKRAKSRSKSPPARRRRSPSASKSPPAPRRRRSPSKSRSPAPKR 404



 Score = 27.9 bits (59), Expect = 9.3
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = +3

Query: 159 VQEK*IATLFPMEFAVKKNLNRSTSISATP*PART--SPRCDVRSARSRSGRSEDTAPSP 332
           +++K IA++     +      RS S S +P PAR   SP      A  R+     + P+P
Sbjct: 285 LRQKAIASVAARAKSGSPRRRRSPSASKSPPPARRRRSPSQSKSPAPKRAKSRSKSPPAP 344

Query: 333 SRRR 344
           +RRR
Sbjct: 345 ARRR 348


>Z68131-1|CAA92217.1|  467|Caenorhabditis elegans Hypothetical
           protein B0395.2 protein.
          Length = 467

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 145 FRNWWYKKNKSRHYFPWNL 201
           + NWW+  N + +Y  WNL
Sbjct: 318 YLNWWHSSNMAEYYRNWNL 336


>AC024763-6|AAO12403.1|  603|Caenorhabditis elegans Calpain family
           protein 4, isoform b protein.
          Length = 603

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 140 LHSETGGTRKINRDIISHGICGKKKP*QKY 229
           LH+  G T K+  D +  G CGKK+   K+
Sbjct: 138 LHNNLGNTGKVYLDNLMKGKCGKKRKVHKF 167


>AC024763-5|AAO12402.1|  716|Caenorhabditis elegans Calpain family
           protein 4, isoform a protein.
          Length = 716

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 140 LHSETGGTRKINRDIISHGICGKKKP*QKY 229
           LH+  G T K+  D +  G CGKK+   K+
Sbjct: 138 LHNNLGNTGKVYLDNLMKGKCGKKRKVHKF 167


>U28739-11|AAR25657.1|  487|Caenorhabditis elegans Hypothetical
           protein C17G10.6b protein.
          Length = 487

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -3

Query: 435 PP*SGGRYATGNRQRAPPPSRSQGGAPASKH 343
           PP   GR  TG R R PP  ++    P  KH
Sbjct: 99  PPRHRGRRPTGGRGRRPPTPQAPVRVPMGKH 129


>U28739-10|AAR25656.1|  683|Caenorhabditis elegans Hypothetical
           protein C17G10.6a protein.
          Length = 683

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -3

Query: 435 PP*SGGRYATGNRQRAPPPSRSQGGAPASKH 343
           PP   GR  TG R R PP  ++    P  KH
Sbjct: 150 PPRHRGRRPTGGRGRRPPTPQAPVRVPMGKH 180


>Z78064-1|CAB01509.1|  313|Caenorhabditis elegans Hypothetical
           protein F57B1.3 protein.
          Length = 313

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 18/69 (26%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
 Frame = -3

Query: 567 PGGPPXXVXXPAX-GXXQXGXPXXPARTAEIGASALEXLLRRGALPP*SGGRYATGNRQR 391
           P GPP     P   G    G P  P    + GA        +   P   G   + G    
Sbjct: 244 PPGPPGPAGAPGQPGQSGSGQPGGPGPQGDAGAPGAPGQPGQAGAPGQDGDSGSEGACDH 303

Query: 390 APPPSRSQG 364
            PPP  + G
Sbjct: 304 CPPPRTAPG 312


>Z46787-10|CAA86749.1|  154|Caenorhabditis elegans Hypothetical
           protein C16C10.11 protein.
          Length = 154

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +3

Query: 255 ARTSPRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHP 368
           A  SP   VRSA   + +S   AP P R  A +P  HP
Sbjct: 7   ASPSPSAPVRSAPRPAAQSSFAAP-PPRPAAAAPAYHP 43


>Z35719-1|CAA84800.1|  296|Caenorhabditis elegans Hypothetical
           protein F17C8.2 protein.
          Length = 296

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/42 (30%), Positives = 13/42 (30%)
 Frame = +2

Query: 491 RAGXXGXPXWXXPXAGXXTXXGGPPGXPXXXXGPXPXXPPXP 616
           R    G P W            GPPG P     P    PP P
Sbjct: 82  RQDFSGLPAWCQCEPAKPVCPPGPPGPPGEPGQPGSAGPPGP 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,191,172
Number of Sequences: 27780
Number of extensions: 267074
Number of successful extensions: 1281
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1261
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)