Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_K01
(751 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0089 - 12335195-12335614 32 0.42
10_08_0931 - 21647562-21649037 31 0.74
12_02_0760 - 22888636-22889407,22889503-22889769,22890001-228903... 31 0.98
04_03_0856 + 20336390-20336906,20337276-20337397 31 0.98
02_05_1314 - 35661824-35661912,35662031-35662454,35662689-356627... 31 0.98
05_04_0443 - 21283680-21283940,21284044-21284118,21284620-212846... 26 1.0
12_02_1217 + 27082452-27083593,27085041-27085158 30 1.7
02_05_0278 + 27404914-27404947,27405088-27405228,27405747-274057... 30 1.7
06_03_0939 + 26131405-26131596,26132753-26133166 29 3.0
04_04_0911 - 29340222-29341103 29 3.0
02_04_0144 - 20177136-20177231,20177525-20178010,20178103-20178162 29 3.9
10_07_0100 + 12861588-12862601 29 5.2
10_08_0487 - 18253355-18253408,18255645-18257495 28 6.9
10_06_0145 + 11215895-11216860 28 6.9
08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614 28 6.9
08_01_1026 - 10366534-10368021,10368505-10368525 28 6.9
07_01_0756 + 5819367-5820038,5820847-5821005 28 6.9
04_03_1017 + 21747044-21748051 28 6.9
01_01_0953 - 7472173-7472178,7472216-7472311,7472370-7472462,747... 28 6.9
06_01_0290 + 2122758-2123015,2123128-2123544 28 9.1
05_01_0409 + 3230761-3230856,3231463-3231560,3232747-3233386 28 9.1
02_03_0066 + 14657007-14657655,14658319-14658581 28 9.1
>01_03_0089 - 12335195-12335614
Length = 139
Score = 32.3 bits (70), Expect = 0.42
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Frame = +1
Query: 142 APSRHSRSPARLRPLPXYYSVCISTIYPGLRRPIWRS-SPMTPPSTTRVGRRRCFIDDFR 318
A S SRSP L+P P V ++ P L R RS +P TP +T+ G + +
Sbjct: 33 ARSPSSRSPLFLQPSPTELIVIVAD-EPPLHRLSPRSGTPPTPSATSTAGPSAAALSRGQ 91
Query: 319 PQLPPW--DSGSGS-GASTLTPRKAQRCS---SKGVALRTP 423
Q W +SG GS G TLT A S KG R+P
Sbjct: 92 RQGEGWKRNSGRGSDGQGTLTLANASPGSVSQQKGGEERSP 132
>10_08_0931 - 21647562-21649037
Length = 491
Score = 31.5 bits (68), Expect = 0.74
Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Frame = +1
Query: 82 HTRLLVEPFVPISSRGNAFPA--PSRHSRSPARLRPLPXYYSVCI---STIYPGLRRPIW 246
H +L P +P SR F A PS S SP RL P + S Y RR +
Sbjct: 210 HETVLPSP-IPWRSRSGRFDASAPSPPSPSPKRLSPASSLSKETLAKASEDYSSRRRSPY 268
Query: 247 RSSPMTPP 270
+SSP PP
Sbjct: 269 KSSPPAPP 276
>12_02_0760 -
22888636-22889407,22889503-22889769,22890001-22890302,
22890402-22890512,22890990-22891568,22892026-22892087,
22892434-22892754,22893434-22893776
Length = 918
Score = 31.1 bits (67), Expect = 0.98
Identities = 27/84 (32%), Positives = 32/84 (38%)
Frame = +1
Query: 223 PGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQRCSSK 402
P RRP+ P R GRRRC D + PP + GA PR K
Sbjct: 294 PATRRPVLGGRGRPYPRRCRTGRRRCRTDP-SSESPP----AKDGAGIYVPRDEAFTERK 348
Query: 403 GVALRTPR*ASLSRLGASTARPXV 474
A T + +LS L A T V
Sbjct: 349 AGAFATKK--ALSALSAFTTAQRV 370
>04_03_0856 + 20336390-20336906,20337276-20337397
Length = 212
Score = 31.1 bits (67), Expect = 0.98
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 247 RSSPMTPPST-TRVGRRRCFIDDFRPQLPPWDSGSGSG 357
RSSP S TRVGRRR F F P W +G +G
Sbjct: 10 RSSPRGDASAPTRVGRRRAFPLPFASPPPEWPAGKLAG 47
>02_05_1314 -
35661824-35661912,35662031-35662454,35662689-35662787,
35662886-35662995,35663263-35663516,35664080-35664098,
35664834-35665075,35665662-35666401
Length = 658
Score = 31.1 bits (67), Expect = 0.98
Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +1
Query: 253 SPMTPPSTTRVGRRRCFIDDFRP-QLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTP 423
+P+ PPS CF+ P + W + + + PR+ S+ + L TP
Sbjct: 8 TPLPPPSLAAASTSSCFLPSLLPIRRRRWPTPKATATAAFPPRRPAPLSANNLPLHTP 65
>05_04_0443 -
21283680-21283940,21284044-21284118,21284620-21284649,
21286744-21287247
Length = 289
Score = 25.8 bits (54), Expect(2) = 1.0
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +1
Query: 115 ISSRGNAFPAPSRHSRSPARLRPLPXYYSVCISTIYPGLRRPIWRSSPMTPP 270
I S +A P PS + PAR P P S+ +S+ P L P+ S P PP
Sbjct: 21 IESLIHAAP-PSAAAVLPAR-PPSPPRASIPVSSSPPLLPPPVAGSKPQLPP 70
Score = 23.8 bits (49), Expect(2) = 1.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 316 RPQLPPWDSGSGSGASTLTP 375
+PQLPP+ S S +S+ P
Sbjct: 65 KPQLPPFSSSSSVASSSSPP 84
>12_02_1217 + 27082452-27083593,27085041-27085158
Length = 419
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/74 (27%), Positives = 31/74 (41%)
Frame = +3
Query: 36 YTNCITWECQTDSCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRLLFSLYIN 215
Y ++ C T +CS E V SD + + G + + R PP PR L L+ +
Sbjct: 27 YVLALSSSCNTPACSDEEEEDDEVGSDADGDDLYGGELEEEDSPR--PPPPRPLSGLFYH 84
Query: 216 DIPRSPETHLALFA 257
+ +LA A
Sbjct: 85 TASDNQPGYLAFDA 98
>02_05_0278 +
27404914-27404947,27405088-27405228,27405747-27405772,
27406036-27406071,27406296-27406976
Length = 305
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 331 PWDSGSGSGA-STLTPRKAQRCSSKGVALRTPR*ASLSRLGASTARPXVRPIHDVR 495
P GS S +T TPR A RC+S A R A+ +R AS RP V VR
Sbjct: 232 PRTGGSASDTRTTSTPRSAPRCASARAASRRSS-AAPARRRASEPRPRVSSAMRVR 286
>06_03_0939 + 26131405-26131596,26132753-26133166
Length = 201
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = -3
Query: 380 FRGVNVDAPLPEPLSHGGSCGLKS--SMKQRLLPTRVVDGGVIGEERQ 243
F G++ APLP P + G CG + S+ + P+ ++ G + ++R+
Sbjct: 134 FSGLHYKAPLPRPSAGGHRCGAVATPSVTDEVAPSALLLGHIAPQQRK 181
>04_04_0911 - 29340222-29341103
Length = 293
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +1
Query: 331 PWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*AS---LSRLG-ASTARPXVRPIHDVRP 498
PW G G+GAS+ PR+ R +S R A+ L R G +S++ P R RP
Sbjct: 213 PW--GGGAGASSCRPRRPPRSTSITAFARASTSATSTPLCRRGSSSSSAPQGRGFISTRP 270
Query: 499 AH 504
H
Sbjct: 271 CH 272
>02_04_0144 - 20177136-20177231,20177525-20178010,20178103-20178162
Length = 213
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +1
Query: 223 PGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLPP--WDSGSGSG 357
P LR P SP P+ T V DD RP+LP W G G G
Sbjct: 44 PELREPT-SPSPSLAPAPTPVSGAGGGDDDMRPRLPTERWRRGGGRG 89
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = -3
Query: 359 APLPEPLSHGGSCGLKSSMKQRLLPTRVVDGGVIGEERQMG 237
AP P P+S G G M+ RL R GG GEER G
Sbjct: 57 APAPTPVSGAG--GGDDDMRPRLPTERWRRGGGRGEERHTG 95
>10_07_0100 + 12861588-12862601
Length = 337
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 7/53 (13%)
Frame = +1
Query: 160 RSPARLRPL--PXYYSVCISTIYPG-----LRRPIWRSSPMTPPSTTRVGRRR 297
+ P+ RP P Y ST P RRP +P TPP+TT R R
Sbjct: 179 KRPSAQRPACSPDYPEPACSTAPPSSSSSYARRPCHAKTPRTPPTTTTTARAR 231
>10_08_0487 - 18253355-18253408,18255645-18257495
Length = 634
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 503 IPWAPKGQFLGVPLXSRMXFPXPXQXGTXIL 595
+PWA G +LG+ +P P Q GT IL
Sbjct: 264 VPWAA-GNYLGIIFYFMPPWPPPNQIGTIIL 293
>10_06_0145 + 11215895-11216860
Length = 321
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +3
Query: 72 SCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPR 191
S S TT +D+ S P P +S + PP+PR
Sbjct: 240 SVSEASTTTTADAADVSSTGSSPSPTSSNQAATATPPAPR 279
>08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614
Length = 248
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 128 GTRSRPRHVTAGVPQGSALSP 190
G RSRPR AG PQ +A SP
Sbjct: 156 GRRSRPRRCLAGRPQATAGSP 176
>08_01_1026 - 10366534-10368021,10368505-10368525
Length = 502
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/53 (28%), Positives = 20/53 (37%)
Frame = +1
Query: 250 SSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGV 408
S+P PP +D +PP G G G +P K +S GV
Sbjct: 85 SAPPPPPPAEPEPEPEQDEEDAASMIPPASDGGGGGGGGFSPTKLSMLTSAGV 137
>07_01_0756 + 5819367-5820038,5820847-5821005
Length = 276
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/68 (25%), Positives = 28/68 (41%)
Frame = +1
Query: 100 EPFVPISSRGNAFPAPSRHSRSPARLRPLPXYYSVCISTIYPGLRRPIWRSSPMTPPSTT 279
E +VP++ G H L LP + + PGL+ + + +P+ T
Sbjct: 45 EKWVPVTKLGRLVKENKIHKIEEIYLHSLPVKEHQIVEQLVPGLKDEVMKITPV--QKQT 102
Query: 280 RVGRRRCF 303
R G+R F
Sbjct: 103 RAGQRTRF 110
>04_03_1017 + 21747044-21748051
Length = 335
Score = 28.3 bits (60), Expect = 6.9
Identities = 39/146 (26%), Positives = 51/146 (34%), Gaps = 7/146 (4%)
Frame = +1
Query: 106 FVPIS-SRGNAFPAPSRHSRSPARLRPLPXYYSV------CISTIYPGLRRPIWRSSPMT 264
+ P S SR A +P SP R R YS S Y P +SP
Sbjct: 162 YTPASPSRRAAASSPDYTPESPPRRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDY 221
Query: 265 PPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSR 444
PST RR D+ P PP + S PR+A +S TP +
Sbjct: 222 SPSTPP---RRAASPDYTPMSPPRRAASPDYTQMTPPRRA---ASPDYTPSTPPPPRAAS 275
Query: 445 LGASTARPXVRPIHDVRPAHTVGPER 522
+ + P P+ + TV P R
Sbjct: 276 PDYTPSTPPSSPLPSAAESFTVPPPR 301
>01_01_0953 -
7472173-7472178,7472216-7472311,7472370-7472462,
7472855-7473019,7473689-7474821,7474902-7475426,
7477077-7477249,7478737-7478831,7478893-7481688
Length = 1693
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 181 PLPXYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLP 330
P+ S S I P L+ P W S PM + R F+ +F+ Q+P
Sbjct: 457 PVVDMESFFTSVIVPELQAPDWESEPMLKATVLR------FLKEFKDQIP 500
>06_01_0290 + 2122758-2123015,2123128-2123544
Length = 224
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 205 KLNSXRGEGGALRDSGCDVTGPGTR 131
K S G G + D+GCDV G G R
Sbjct: 37 KRGSGSGSGDEVDDAGCDVGGGGAR 61
>05_01_0409 + 3230761-3230856,3231463-3231560,3232747-3233386
Length = 277
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -2
Query: 321 RSEVVDEATPSSYTSSRWRCHRRRAPDGS 235
R E++ + +P S S +RC+ + P+GS
Sbjct: 65 RDEIISQYSPMSEDSDDYRCYDTQLPNGS 93
>02_03_0066 + 14657007-14657655,14658319-14658581
Length = 303
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +1
Query: 253 SPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQR 390
SP +PP CF D F P P S S + S PR+ Q+
Sbjct: 85 SPPSPPPPPLERPHTCF-DVFTPDSPFGRSASAASLSNCNPREVQK 129
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,965,946
Number of Sequences: 37544
Number of extensions: 482269
Number of successful extensions: 1833
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1832
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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