Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_K01
(751 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 62 1e-09
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 62 1e-09
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 56 5e-08
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 56 5e-08
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 56 5e-08
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 56 5e-08
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 52 8e-07
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 52 8e-07
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 48 1e-05
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 47 2e-05
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 47 2e-05
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 47 2e-05
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 47 2e-05
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 47 2e-05
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 47 2e-05
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 47 2e-05
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 47 2e-05
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 46 6e-05
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 44 2e-04
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 42 7e-04
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 42 0.001
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 42 0.001
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 41 0.002
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 35 0.10
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 34 0.24
AY122108-1|AAM52620.1| 593|Drosophila melanogaster GH12004p pro... 32 0.73
AE014134-1761|AAF52856.2| 1424|Drosophila melanogaster CG31714-P... 32 0.73
BT012340-1|AAS77465.1| 355|Drosophila melanogaster AT11348p pro... 31 1.3
AY069838-1|AAL39983.1| 555|Drosophila melanogaster SD08447p pro... 31 1.3
AE014298-1054|AAF46269.1| 555|Drosophila melanogaster CG12155-P... 31 1.3
AY060348-1|AAL25387.1| 1282|Drosophila melanogaster GH27234p pro... 30 3.9
AE014296-299|AAN11492.1| 1238|Drosophila melanogaster CG33791-PC... 30 3.9
AE014296-298|AAO41213.1| 1238|Drosophila melanogaster CG33791-PA... 30 3.9
AE014296-297|AAF47520.2| 1282|Drosophila melanogaster CG33791-PD... 30 3.9
AE014296-296|AAF47519.2| 1282|Drosophila melanogaster CG33791-PB... 30 3.9
AE014134-3364|ABI31327.1| 1002|Drosophila melanogaster CG8681-PB... 29 6.8
Y15251-1|CAA75535.1| 943|Drosophila melanogaster RNA binding pr... 29 8.9
AY071225-1|AAL48847.1| 1203|Drosophila melanogaster RE26660p pro... 29 8.9
AY061395-1|AAL28943.1| 941|Drosophila melanogaster LD32008p pro... 29 8.9
AE014298-724|AAS65263.1| 941|Drosophila melanogaster CG3312-PB,... 29 8.9
AE014298-723|AAF46022.1| 941|Drosophila melanogaster CG3312-PA,... 29 8.9
AE014297-2332|AAF55402.1| 2112|Drosophila melanogaster CG4090-PA... 29 8.9
AE014296-982|AAF50759.1| 1203|Drosophila melanogaster CG5249-PA ... 29 8.9
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 61.7 bits (143), Expect = 1e-09
Identities = 25/74 (33%), Positives = 48/74 (64%)
Frame = +3
Query: 195 LFSLYINDIPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINP 374
LF+++ +DIP++ L+LFADD A+Y + + +++ +Q+ + +++KW+I INP
Sbjct: 676 LFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINP 735
Query: 375 TKSTAVLFKRGRPP 416
K+ A+ F + R P
Sbjct: 736 NKTNAIFFTKRRKP 749
Score = 52.8 bits (121), Expect = 5e-07
Identities = 23/56 (41%), Positives = 38/56 (67%)
Frame = +2
Query: 23 HNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSP 190
H+GL++KL +G P L+ I++++L++R F + ++S R + AGVPQGS L P
Sbjct: 619 HDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGP 674
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 61.7 bits (143), Expect = 1e-09
Identities = 25/74 (33%), Positives = 48/74 (64%)
Frame = +3
Query: 195 LFSLYINDIPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINP 374
LF+++ +DIP++ L+LFADD A+Y + + +++ +Q+ + +++KW+I INP
Sbjct: 624 LFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINP 683
Query: 375 TKSTAVLFKRGRPP 416
K+ A+ F + R P
Sbjct: 684 NKTNAIFFTKRRKP 697
Score = 52.8 bits (121), Expect = 5e-07
Identities = 23/56 (41%), Positives = 38/56 (67%)
Frame = +2
Query: 23 HNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSP 190
H+GL++KL +G P L+ I++++L++R F + ++S R + AGVPQGS L P
Sbjct: 567 HDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGP 622
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 56.0 bits (129), Expect = 5e-08
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +2
Query: 23 HNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEG-TRSRPRHVTAGVPQGSALSP 190
H+GL+YKL + +P L ++ +YLSNR+F R++G T SR ++ AGVPQGS L P
Sbjct: 195 HDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGP 250
Score = 35.5 bits (78), Expect = 0.078
Identities = 34/129 (26%), Positives = 52/129 (40%), Gaps = 16/129 (12%)
Frame = +3
Query: 102 TVRSDIESRERVPGPVTSQPESRKAPPSPRLLFSLYINDIPRS-----------PETH-- 242
+VR D E+ R+ P+ P +L+S+Y +D+P P+ H
Sbjct: 224 SVRIDGETTSRIGNIRAGVPQGSILGP---VLYSIYSSDMPYPIVKDYMRNISFPDYHPT 280
Query: 243 ---LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRP 413
LA +ADDT I + L Q +W +KW I IN K+ +LF +
Sbjct: 281 NIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKE 340
Query: 414 PNTTLSIPL 440
+ PL
Sbjct: 341 QTNIYTPPL 349
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 56.0 bits (129), Expect = 5e-08
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +2
Query: 23 HNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEG-TRSRPRHVTAGVPQGSALSP 190
H+GL+YKL + +P L ++ +YLSNR+F R++G T SR ++ AGVPQGS L P
Sbjct: 642 HDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGP 697
Score = 35.5 bits (78), Expect = 0.078
Identities = 34/129 (26%), Positives = 52/129 (40%), Gaps = 16/129 (12%)
Frame = +3
Query: 102 TVRSDIESRERVPGPVTSQPESRKAPPSPRLLFSLYINDIPRS-----------PETH-- 242
+VR D E+ R+ P+ P +L+S+Y +D+P P+ H
Sbjct: 671 SVRIDGETTSRIGNIRAGVPQGSILGP---VLYSIYSSDMPYPIVKDYMRNISFPDYHPT 727
Query: 243 ---LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRP 413
LA +ADDT I + L Q +W +KW I IN K+ +LF +
Sbjct: 728 NIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKE 787
Query: 414 PNTTLSIPL 440
+ PL
Sbjct: 788 QTNIYTPPL 796
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 56.0 bits (129), Expect = 5e-08
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +2
Query: 23 HNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEG-TRSRPRHVTAGVPQGSALSP 190
H+GL+YKL + +P L ++ +YLSNR+F R++G T SR ++ AGVPQGS L P
Sbjct: 642 HDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGP 697
Score = 35.5 bits (78), Expect = 0.078
Identities = 34/129 (26%), Positives = 52/129 (40%), Gaps = 16/129 (12%)
Frame = +3
Query: 102 TVRSDIESRERVPGPVTSQPESRKAPPSPRLLFSLYINDIPRS-----------PETH-- 242
+VR D E+ R+ P+ P +L+S+Y +D+P P+ H
Sbjct: 671 SVRIDGETTSRIGNIRAGVPQGSILGP---VLYSIYSSDMPYPIVKDYMRNISFPDYHPT 727
Query: 243 ---LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRP 413
LA +ADDT I + L Q +W +KW I IN K+ +LF +
Sbjct: 728 NIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKE 787
Query: 414 PNTTLSIPL 440
+ PL
Sbjct: 788 QTNIYTPPL 796
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 56.0 bits (129), Expect = 5e-08
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +2
Query: 23 HNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEG-TRSRPRHVTAGVPQGSALSP 190
H+GL+YKL + +P L ++ +YLSNR+F R++G T SR ++ AGVPQGS L P
Sbjct: 642 HDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGP 697
Score = 35.5 bits (78), Expect = 0.078
Identities = 34/129 (26%), Positives = 52/129 (40%), Gaps = 16/129 (12%)
Frame = +3
Query: 102 TVRSDIESRERVPGPVTSQPESRKAPPSPRLLFSLYINDIPRS-----------PETH-- 242
+VR D E+ R+ P+ P +L+S+Y +D+P P+ H
Sbjct: 671 SVRIDGETTSRIGNIRAGVPQGSILGP---VLYSIYSSDMPYPIVKDYMRNISFPDYHPT 727
Query: 243 ---LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRP 413
LA +ADDT I + L Q +W +KW I IN K+ +LF +
Sbjct: 728 NIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKE 787
Query: 414 PNTTLSIPL 440
+ PL
Sbjct: 788 QTNIYTPPL 796
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 52.0 bits (119), Expect = 8e-07
Identities = 26/68 (38%), Positives = 40/68 (58%)
Frame = +2
Query: 23 HNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPXTIQ 202
H GL+YK + P +L L+++ +L R+F V+G +S + + AGVPQGS L P T+
Sbjct: 596 HPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGP-TLY 653
Query: 203 FVYQRYTP 226
V+ P
Sbjct: 654 SVFASDMP 661
Score = 35.9 bits (79), Expect = 0.059
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 10/89 (11%)
Frame = +3
Query: 195 LFSLYINDIP-RSPETH-------LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFR 350
L+S++ +D+P +P T +A +ADDTA+ + LQ QW
Sbjct: 652 LYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAE 711
Query: 351 KWRIDINPTKSTAVLF--KRGRPPNTTLS 431
W + IN K V F + G P +L+
Sbjct: 712 NWNVRINAEKCANVTFANRTGSCPGVSLN 740
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 52.0 bits (119), Expect = 8e-07
Identities = 26/68 (38%), Positives = 40/68 (58%)
Frame = +2
Query: 23 HNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPXTIQ 202
H GL+YK + P +L L+++ +L R+F V+G +S + + AGVPQGS L P T+
Sbjct: 398 HPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGP-TLY 455
Query: 203 FVYQRYTP 226
V+ P
Sbjct: 456 SVFASDMP 463
Score = 35.9 bits (79), Expect = 0.059
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 10/89 (11%)
Frame = +3
Query: 195 LFSLYINDIP-RSPETH-------LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFR 350
L+S++ +D+P +P T +A +ADDTA+ + LQ QW
Sbjct: 454 LYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAE 513
Query: 351 KWRIDINPTKSTAVLF--KRGRPPNTTLS 431
W + IN K V F + G P +L+
Sbjct: 514 NWNVRINAEKCANVTFANRTGSCPGVSLN 542
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 48.4 bits (110), Expect = 1e-05
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Frame = +3
Query: 192 LLFSLYINDIPRSP-----ETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKW 356
LL+ LY +D+P+ ++ LA FADD + Y R + +Q A +W R+W
Sbjct: 649 LLYCLYSHDMPQPDVSLYGKSMLATFADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRW 708
Query: 357 RIDINPTKSTAVLF--KRGRPP 416
I IN +KS V F KR PP
Sbjct: 709 NIGINSSKSNNVCFTLKRRTPP 730
Score = 37.5 bits (83), Expect = 0.019
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = +2
Query: 23 HNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSP 190
H GL K+ +P +++ YL R F R S +V AGVPQGS L P
Sbjct: 594 HIGLQLKI-KQTLPAPYFGLLKSYLEGRRFAVRFHSAISTEHNVAAGVPQGSVLGP 648
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 23 HNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSP 190
H GL+ KL + +P L +I+ YL+NR+F + + G SR + AGVPQGS L P
Sbjct: 639 HEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGP 694
Score = 34.3 bits (75), Expect = 0.18
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Frame = +3
Query: 192 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKKALLHRRLQTAATTMGQWF 347
LL+S++ +D+P SP + L +ADDT + S R + + W
Sbjct: 695 LLYSIFSSDMPLPYIYRPSPTERIMLSTYADDTIVLSSDTLATAATRNNENYLKSFSDWA 754
Query: 348 RKWRIDINPTKSTAVLF 398
KW I +N K+ V+F
Sbjct: 755 DKWGISVNAAKTGHVIF 771
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 23 HNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSP 190
H GL+ KL + +P L +I+ YL+NR+F + + G SR + AGVPQGS L P
Sbjct: 523 HEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGP 578
Score = 33.1 bits (72), Expect = 0.42
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Frame = +3
Query: 192 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKKALLHRRLQTAATTMGQWF 347
+L+S++ +D+P SP + L +ADDT + S R + T W
Sbjct: 579 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 638
Query: 348 RKWRIDINPTKSTAVLF 398
KW I +N K+ V++
Sbjct: 639 DKWGISVNAAKTGHVIY 655
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 47.2 bits (107), Expect = 2e-05
Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Frame = +3
Query: 195 LFSLYINDIPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINP 374
L+ +Y DIP + ++ FADDTAI R +L + +W WRI +N
Sbjct: 648 LYLIYTADIPTNSRLTVSTFADDTAILSRSRSPIQATAQLALYLIDIKKWLSDWRIKVNE 707
Query: 375 TKSTAVLFKRGR---PPNTTLSIPL 440
K V F R PP SIPL
Sbjct: 708 QKCKHVTFTLNRQDCPPLLLNSIPL 732
Score = 42.7 bits (96), Expect = 5e-04
Identities = 22/69 (31%), Positives = 37/69 (53%)
Frame = +2
Query: 26 NGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPXTIQF 205
+GL++K+ + +P+ +++ YL +R F R S + AGVPQGS L P T+
Sbjct: 593 DGLMFKI-KISLPESTHKLLKSYLYDRKFAVRCNTATSTVHTIEAGVPQGSVLGP-TLYL 650
Query: 206 VYQRYTPVS 232
+Y P +
Sbjct: 651 IYTADIPTN 659
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 23 HNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSP 190
H GL+ KL + +P L +I+ YL+NR+F + + G SR + AGVPQGS L P
Sbjct: 651 HEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGP 706
Score = 36.7 bits (81), Expect = 0.034
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Frame = +3
Query: 192 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKKALLHRRLQTAATTMGQWF 347
LL+S++ +D+P SP + L +ADDT + S R + T W
Sbjct: 707 LLYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNENYLKTFSDWA 766
Query: 348 RKWRIDINPTKSTAVLF--KRGRPPNT 422
KW I +N K+ V+F K P N+
Sbjct: 767 DKWGISVNAAKTGHVIFTLKNDLPTNS 793
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 23 HNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSP 190
H GL+ KL + +P L +I+ YL+NR+F + + G SR + AGVPQGS L P
Sbjct: 639 HEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGP 694
Score = 33.1 bits (72), Expect = 0.42
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Frame = +3
Query: 192 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKKALLHRRLQTAATTMGQWF 347
+L+S++ +D+P SP + L +ADDT + S R + T W
Sbjct: 695 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 754
Query: 348 RKWRIDINPTKSTAVLF 398
KW I +N K+ V++
Sbjct: 755 DKWGISVNAAKTGHVIY 771
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 23 HNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSP 190
H GL+ KL + +P L +I+ YL+NR+F + + G SR + AGVPQGS L P
Sbjct: 639 HEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGP 694
Score = 33.1 bits (72), Expect = 0.42
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Frame = +3
Query: 192 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKKALLHRRLQTAATTMGQWF 347
+L+S++ +D+P SP + L +ADDT + S R + T W
Sbjct: 695 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 754
Query: 348 RKWRIDINPTKSTAVLF 398
KW I +N K+ V++
Sbjct: 755 DKWGISVNAAKTGHVIY 771
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 23 HNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSP 190
H GL+ KL + +P L +I+ YL+NR+F + + G SR + AGVPQGS L P
Sbjct: 601 HEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGP 656
Score = 33.1 bits (72), Expect = 0.42
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Frame = +3
Query: 192 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKKALLHRRLQTAATTMGQWF 347
+L+S++ +D+P SP + L +ADDT + S R + T W
Sbjct: 657 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 716
Query: 348 RKWRIDINPTKSTAVLF 398
KW I +N K+ V++
Sbjct: 717 DKWGISVNAAKTGHVIY 733
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 23 HNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSP 190
H GL+ KL + +P L +I+ YL+NR+F + + G SR + AGVPQGS L P
Sbjct: 639 HEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGP 694
Score = 33.1 bits (72), Expect = 0.42
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Frame = +3
Query: 192 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKKALLHRRLQTAATTMGQWF 347
+L+S++ +D+P SP + L +ADDT + S R + T W
Sbjct: 695 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 754
Query: 348 RKWRIDINPTKSTAVLF 398
KW I +N K+ V++
Sbjct: 755 DKWGISVNAAKTGHVIY 771
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 46.0 bits (104), Expect = 6e-05
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = +2
Query: 23 HNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSP 190
H+GLI K+ + P +++ YL +R F RV + S PR + AGVPQGS L P
Sbjct: 595 HDGLISKVKKL-FPAPYYGVLKSYLEDRRFMVRVRNSYSIPRVMRAGVPQGSVLGP 649
Score = 41.5 bits (93), Expect = 0.001
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Frame = +3
Query: 192 LLFSLYINDIPRSPETH--------LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWF 347
LL+S++ D+P H LA +ADD A+ YS R LQ TT+ W
Sbjct: 650 LLYSVFTADLPCPNAYHMADPRKALLATYADDIALLYSSNCCNEAARGLQEYLTTLAAWC 709
Query: 348 RKWRIDINPTKS 383
++W + +NP K+
Sbjct: 710 KRWILKVNPQKT 721
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 44.0 bits (99), Expect = 2e-04
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = +2
Query: 26 NGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSP 190
+GL++K+ + +P +++ YL NR F R + + SR + AGVPQGS L P
Sbjct: 591 DGLLFKIIKL-LPQNTHKLLKSYLYNRVFAIRCDTSTSRDCAIEAGVPQGSVLGP 644
Score = 41.5 bits (93), Expect = 0.001
Identities = 23/69 (33%), Positives = 31/69 (44%)
Frame = +3
Query: 192 LLFSLYINDIPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDIN 371
+L++LY D P + FADDTAI + L T++ +W WRI IN
Sbjct: 645 ILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISIN 704
Query: 372 PTKSTAVLF 398
K V F
Sbjct: 705 VQKCKQVTF 713
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 42.3 bits (95), Expect = 7e-04
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = +2
Query: 26 NGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALS 187
+ ++ +L G+ RL +I+ +++NRSFR R+ S + G+PQGS LS
Sbjct: 595 HAVLCRLERWGIGPRLYNLIKAFMTNRSFRVRINNVTSNSHILHNGIPQGSPLS 648
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 41.5 bits (93), Expect = 0.001
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +2
Query: 26 NGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSP 190
+GL++K+ + +P +++ YL N F R + + SR + AGVPQGS L P
Sbjct: 591 DGLLFKIIKL-LPQNTHKLLKSYLYNTVFAIRCDTSTSRDCAIEAGVPQGSVLGP 644
Score = 41.5 bits (93), Expect = 0.001
Identities = 23/69 (33%), Positives = 31/69 (44%)
Frame = +3
Query: 192 LLFSLYINDIPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDIN 371
+L++LY D P + FADDTAI + L T++ +W WRI IN
Sbjct: 645 ILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISIN 704
Query: 372 PTKSTAVLF 398
K V F
Sbjct: 705 VQKCKQVTF 713
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 41.5 bits (93), Expect = 0.001
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 50 NMGVPDRLVLIIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSPXTIQFVYQRYTP 226
N+GVPD + +I +Y +R Y E G RS V+AGVPQGS L P +Y
Sbjct: 576 NLGVPDYIRGVIGNYFRDRVLWYVTEDGPRSH--QVSAGVPQGSVLGPILWNIMYDGILS 633
Query: 227 VS 232
+S
Sbjct: 634 IS 635
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 40.7 bits (91), Expect = 0.002
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +2
Query: 26 NGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSP 190
+GL++K+ + +P + +++ YL R F R + S + AGVPQGS L P
Sbjct: 132 DGLMFKIIQL-LPQNIHKLLKSYLDKRVFAVRCSSSTSSDFTIEAGVPQGSVLGP 185
Score = 30.3 bits (65), Expect = 2.9
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 192 LLFSLYINDIPRSPETHLALFADDTAI 272
+L++LY DIP + + + FADDTAI
Sbjct: 186 ILYTLYTADIPTNYQLTIFTFADDTAI 212
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 35.1 bits (77), Expect = 0.10
Identities = 24/55 (43%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 50 NMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRH-VTAGVPQGSALSPXTIQFVY 211
N P LV IR Y SNR E + RH VT GVPQGS L P +Y
Sbjct: 14 NFSDPAYLVRFIRSYSSNRVLP--CESSEGVFRHQVTGGVPQGSVLGPLLWNTMY 66
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 33.9 bits (74), Expect = 0.24
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +2
Query: 26 NGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALS 187
+ +I +L +++ I++++SNR RV S P + G+PQGS +S
Sbjct: 587 HSIIQQLQEWKTGPKIIKYIKNFMSNRKITVRVGPHTSSPLPLFNGIPQGSPIS 640
>AY122108-1|AAM52620.1| 593|Drosophila melanogaster GH12004p
protein.
Length = 593
Score = 32.3 bits (70), Expect = 0.73
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 78 SSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRLLFSLYI 212
+S+ T+ T S S + P+TS P A PSP L F L++
Sbjct: 56 TSFSTSTSTTSSTSTSVAALAAPLTSGPGDSSATPSPSLSFILFV 100
>AE014134-1761|AAF52856.2| 1424|Drosophila melanogaster CG31714-PA
protein.
Length = 1424
Score = 32.3 bits (70), Expect = 0.73
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 78 SSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRLLFSLYI 212
+S+ T+ T S S + P+TS P A PSP L F L++
Sbjct: 887 TSFSTSTSTTSSTSTSVAALAAPLTSGPGDSSATPSPSLSFILFV 931
>BT012340-1|AAS77465.1| 355|Drosophila melanogaster AT11348p
protein.
Length = 355
Score = 31.5 bits (68), Expect = 1.3
Identities = 31/99 (31%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Frame = +1
Query: 124 RGNAFPAPS-----RHSRSPARLRPLPXYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVG 288
R + PAPS SRSP+R P P + + ST L + S+P P+
Sbjct: 256 RSGSAPAPSVVPRASASRSPSRKSPSPSHDGISPSTSQESLSKNKSGSAPAPTPTPRGPF 315
Query: 289 RRRCFIDDFRPQLPPWDSGSGS------GASTLTPRKAQ 387
R +F + P DSGS + G S L P K Q
Sbjct: 316 RTAPSNTEFIKRRPAKDSGSRNETQSTPGESELDPTKPQ 354
>AY069838-1|AAL39983.1| 555|Drosophila melanogaster SD08447p
protein.
Length = 555
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 287 EEGVASSTTSDRSYHHGTVVPEVAHRH*PHEKH 385
EEGV+ T S +HH + H H PH H
Sbjct: 203 EEGVSDDTVSQHHHHHHHGHHQQEHHHQPHHHH 235
>AE014298-1054|AAF46269.1| 555|Drosophila melanogaster CG12155-PA
protein.
Length = 555
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 287 EEGVASSTTSDRSYHHGTVVPEVAHRH*PHEKH 385
EEGV+ T S +HH + H H PH H
Sbjct: 203 EEGVSDDTVSQHHHHHHHGHHQQEHHHQPHHHH 235
>AY060348-1|AAL25387.1| 1282|Drosophila melanogaster GH27234p protein.
Length = 1282
Score = 29.9 bits (64), Expect = 3.9
Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Frame = +1
Query: 124 RGNAFPAPS-----RHSRSPARLRPLPXYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVG 288
R + PAPS SRSP+R P P + + ST L + S+P P++
Sbjct: 1183 RSGSAPAPSVVPRASASRSPSRKSPSPSHDGISPSTRQESLSKKKSGSAPAPTPTSRGPF 1242
Query: 289 RRRCFIDDFRPQLPPWDSGSGS------GASTLTPRKAQ 387
R +F + P D GS + G S L P K Q
Sbjct: 1243 RTAPSNTEFIKRRPAKDYGSRNETQSTPGESELDPTKPQ 1281
>AE014296-299|AAN11492.1| 1238|Drosophila melanogaster CG33791-PC,
isoform C protein.
Length = 1238
Score = 29.9 bits (64), Expect = 3.9
Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Frame = +1
Query: 124 RGNAFPAPS-----RHSRSPARLRPLPXYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVG 288
R + PAPS SRSP+R P P + + ST L + S+P P++
Sbjct: 1139 RSGSAPAPSVVPRASASRSPSRKSPSPSHDGISPSTRQESLSKKKSGSAPAPTPTSRGPF 1198
Query: 289 RRRCFIDDFRPQLPPWDSGSGS------GASTLTPRKAQ 387
R +F + P D GS + G S L P K Q
Sbjct: 1199 RTAPSNTEFIKRRPAKDYGSRNETQSTPGESELDPTKPQ 1237
>AE014296-298|AAO41213.1| 1238|Drosophila melanogaster CG33791-PA,
isoform A protein.
Length = 1238
Score = 29.9 bits (64), Expect = 3.9
Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Frame = +1
Query: 124 RGNAFPAPS-----RHSRSPARLRPLPXYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVG 288
R + PAPS SRSP+R P P + + ST L + S+P P++
Sbjct: 1139 RSGSAPAPSVVPRASASRSPSRKSPSPSHDGISPSTRQESLSKKKSGSAPAPTPTSRGPF 1198
Query: 289 RRRCFIDDFRPQLPPWDSGSGS------GASTLTPRKAQ 387
R +F + P D GS + G S L P K Q
Sbjct: 1199 RTAPSNTEFIKRRPAKDYGSRNETQSTPGESELDPTKPQ 1237
>AE014296-297|AAF47520.2| 1282|Drosophila melanogaster CG33791-PD,
isoform D protein.
Length = 1282
Score = 29.9 bits (64), Expect = 3.9
Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Frame = +1
Query: 124 RGNAFPAPS-----RHSRSPARLRPLPXYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVG 288
R + PAPS SRSP+R P P + + ST L + S+P P++
Sbjct: 1183 RSGSAPAPSVVPRASASRSPSRKSPSPSHDGISPSTRQESLSKKKSGSAPAPTPTSRGPF 1242
Query: 289 RRRCFIDDFRPQLPPWDSGSGS------GASTLTPRKAQ 387
R +F + P D GS + G S L P K Q
Sbjct: 1243 RTAPSNTEFIKRRPAKDYGSRNETQSTPGESELDPTKPQ 1281
>AE014296-296|AAF47519.2| 1282|Drosophila melanogaster CG33791-PB,
isoform B protein.
Length = 1282
Score = 29.9 bits (64), Expect = 3.9
Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Frame = +1
Query: 124 RGNAFPAPS-----RHSRSPARLRPLPXYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVG 288
R + PAPS SRSP+R P P + + ST L + S+P P++
Sbjct: 1183 RSGSAPAPSVVPRASASRSPSRKSPSPSHDGISPSTRQESLSKKKSGSAPAPTPTSRGPF 1242
Query: 289 RRRCFIDDFRPQLPPWDSGSGS------GASTLTPRKAQ 387
R +F + P D GS + G S L P K Q
Sbjct: 1243 RTAPSNTEFIKRRPAKDYGSRNETQSTPGESELDPTKPQ 1281
>AE014134-3364|ABI31327.1| 1002|Drosophila melanogaster CG8681-PB,
isoform B protein.
Length = 1002
Score = 29.1 bits (62), Expect = 6.8
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +2
Query: 341 VVPEVAHRH*PHEKHSGALQKGSPSEHHAEHPSP 442
V P + HRH H H P + H +PSP
Sbjct: 967 VEPHLPHRHHHHHHHRHHHHHHQPDQEHDRNPSP 1000
>Y15251-1|CAA75535.1| 943|Drosophila melanogaster RNA binding
protein protein.
Length = 943
Score = 28.7 bits (61), Expect = 8.9
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = -3
Query: 386 CAFRGVNVDAPLPEPLSHGGSCGLKSSMKQRLLPTRVVDGGVIGEE 249
C F+G+N+ + P G S S +R +PT ++ ++ +E
Sbjct: 789 CLFKGMNISVAISNPPPRGTSAVKPSVAPKRRVPTSLIPTTLVRQE 834
>AY071225-1|AAL48847.1| 1203|Drosophila melanogaster RE26660p
protein.
Length = 1203
Score = 28.7 bits (61), Expect = 8.9
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2
Query: 326 YHHGTVVPEVAHRH*PHEKHSGALQKGSPSEHHAEHPSP 442
+H+ +P+ ++ P E+ SGA+ K + HH H P
Sbjct: 4 HHNHNHLPQQQPQN-PQEQQSGAIMKAANQPHHPAHSHP 41
>AY061395-1|AAL28943.1| 941|Drosophila melanogaster LD32008p
protein.
Length = 941
Score = 28.7 bits (61), Expect = 8.9
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = -3
Query: 386 CAFRGVNVDAPLPEPLSHGGSCGLKSSMKQRLLPTRVVDGGVIGEE 249
C F+G+N+ + P G S S +R +PT ++ ++ +E
Sbjct: 787 CLFKGMNISVAISNPPPRGTSAVKPSVAPKRRVPTSLIPTTLVRQE 832
>AE014298-724|AAS65263.1| 941|Drosophila melanogaster CG3312-PB,
isoform B protein.
Length = 941
Score = 28.7 bits (61), Expect = 8.9
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = -3
Query: 386 CAFRGVNVDAPLPEPLSHGGSCGLKSSMKQRLLPTRVVDGGVIGEE 249
C F+G+N+ + P G S S +R +PT ++ ++ +E
Sbjct: 787 CLFKGMNISVAISNPPPRGTSAVKPSVAPKRRVPTSLIPTTLVRQE 832
>AE014298-723|AAF46022.1| 941|Drosophila melanogaster CG3312-PA,
isoform A protein.
Length = 941
Score = 28.7 bits (61), Expect = 8.9
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = -3
Query: 386 CAFRGVNVDAPLPEPLSHGGSCGLKSSMKQRLLPTRVVDGGVIGEE 249
C F+G+N+ + P G S S +R +PT ++ ++ +E
Sbjct: 787 CLFKGMNISVAISNPPPRGTSAVKPSVAPKRRVPTSLIPTTLVRQE 832
>AE014297-2332|AAF55402.1| 2112|Drosophila melanogaster CG4090-PA
protein.
Length = 2112
Score = 28.7 bits (61), Expect = 8.9
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 42 NCITWECQTDSCSSYETTCRTVRSDIESRERVPG-PVTSQPESRKAPPSP 188
N TW +T + SS ETT TV S E+ G T+ PE+ PP P
Sbjct: 1852 NTTTWAPETTTTSSPETT-TTVAS--ETTTTTSGTTTTATPETTTKPPKP 1898
>AE014296-982|AAF50759.1| 1203|Drosophila melanogaster CG5249-PA
protein.
Length = 1203
Score = 28.7 bits (61), Expect = 8.9
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2
Query: 326 YHHGTVVPEVAHRH*PHEKHSGALQKGSPSEHHAEHPSP 442
+H+ +P+ ++ P E+ SGA+ K + HH H P
Sbjct: 4 HHNHNHLPQQQPQN-PQEQQSGAIMKAANQPHHPAHSHP 41
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,907,449
Number of Sequences: 53049
Number of extensions: 753790
Number of successful extensions: 2906
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 2567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2871
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -