Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_J16
(820 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.05c |taf2||TATA-binding protein associated factor Taf2|... 48 2e-06
SPAC19G12.13c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.79
SPAC10F6.14c |||ABC1 kinase family protein|Schizosaccharomyces p... 28 1.8
SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 28 1.8
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 3.2
SPBC215.11c |||aldo/keto reductase, unknown biological role|Schi... 27 4.2
SPBC1A4.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 4.2
SPAC23C11.11 |cka1|orb5|serine/threonine protein kinase Cka1|Sch... 26 5.6
SPBC947.11c |elg1||DNA replication factor C complex subunit Elg1... 26 5.6
SPAC32A11.03c |phx1||homeobox transcription factor Phx1|Schizosa... 26 5.6
SPBC27B12.11c |||transcription factor |Schizosaccharomyces pombe... 26 7.4
SPCC1840.08c |||protein disulfide isomerase |Schizosaccharomyces... 25 9.8
>SPAC3A12.05c |taf2||TATA-binding protein associated factor
Taf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1174
Score = 48.0 bits (109), Expect = 2e-06
Identities = 47/199 (23%), Positives = 92/199 (46%), Gaps = 30/199 (15%)
Frame = +3
Query: 171 RNVHT-MSPRYIEVMRKKSHLVLRMLEQRI---GQELLLPVFNKQLALATNAANTKIGSG 338
RN++ + P ++ + KS LV+ +LE+R+ G L + +L L + + G
Sbjct: 454 RNINIPIDPNTLDFIALKSPLVIHILERRLTKTGGSLGMSRVIPKLLLQVMSGDMLNGC- 512
Query: 339 LWGHLLLSTNLFVKAIFTVTGKDMAVFVDQWVRTGGHAKFQLTSVFNRKRNTVELEIRQ- 515
LST+ F+K + + VF QW+ G+ F++ FNRK+ +E+ I Q
Sbjct: 513 ------LSTSHFLKTCEKASHMRLDVFAQQWIYGYGYPIFRVVQRFNRKKMIIEMGIDQV 566
Query: 516 -----------------DCVHE-------RGIRKYVGPLLVQLQELDGT-FKHTLQIENT 620
D + G+ + GP+ +++ E DGT ++H ++++++
Sbjct: 567 QTKEAPRAPMSDKNFLSDAIRHLNNESIPTGLPVFSGPMTIRIHEADGTPYEHVVELKDS 626
Query: 621 VVKADITCHSKSRRNKKKK 677
K DI ++K +R + +
Sbjct: 627 FTKLDIQYNTKYKRISRNR 645
>SPAC19G12.13c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 29.1 bits (62), Expect = 0.79
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 453 KFQLTSVFNRKRNTVELEIRQDCVHERGIRKYVGPLLVQLQELD 584
++ L S + +ELE RQ+C+ E G+ KY LL+ + L+
Sbjct: 92 EYSLISNALERLENIELE-RQNCMREDGLVKYTNELLLNKETLN 134
>SPAC10F6.14c |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 535
Score = 27.9 bits (59), Expect = 1.8
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = -2
Query: 267 ALVQYAAPTFVIPNEIFCA*LQYTAATWYEHCVRGNRRHWVQSWFH*RAAATGLGLY 97
+L+Q F+ ++ + A ++Y + H V GN+R W++ + A G+G+Y
Sbjct: 9 SLLQKTTSRFIKRSKTY-ADVRYNSQALQNHGVPGNKRKWMKRFVF--VGAAGIGVY 62
>SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 578
Score = 27.9 bits (59), Expect = 1.8
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 465 TSVFNRKRNTVELEIRQDCVH 527
T V+N KR V LE+ DC H
Sbjct: 405 TDVYNGKRTKVRLEMYDDCCH 425
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 3.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 252 RIGQELLLPVFNKQLALATNAANTKIGSGLWG 347
R+ LLL V++ +LAL+ N N G WG
Sbjct: 2 RLISSLLLLVYSARLALSLNLTNQTAVLGYWG 33
Score = 25.8 bits (54), Expect = 7.4
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -1
Query: 637 ISALTTVFSICNVCLNVPSNSCSWTSRGPTYLRIPRSCTQSCRISSSTV 491
IS+ +T + + + PS+ S S T L P T S ISSS++
Sbjct: 594 ISSSSTSSTFSSASTSSPSSISSSISSSSTILSSPTPSTSSLMISSSSI 642
>SPBC215.11c |||aldo/keto reductase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 306
Score = 26.6 bits (56), Expect = 4.2
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 48 IHQELKEVMGYEEQYGGIVLDPWQPPASGTRIEP 149
++++ ++V+ Y EQ G I PW P ASG +P
Sbjct: 193 VNRKNEKVLEYCEQKG-IAFIPWYPLASGALAKP 225
>SPBC1A4.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 249
Score = 26.6 bits (56), Expect = 4.2
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1
Query: 454 NFN*HQSLIEKETP*NLRYDRTAYTSAVYVNTWVPCSSS 570
NF Q + P +L A SA +TW+PCS++
Sbjct: 124 NFTNSQKYFANDLPNSLTDQPLAQPSASQRSTWLPCSAA 162
>SPAC23C11.11 |cka1|orb5|serine/threonine protein kinase
Cka1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 26.2 bits (55), Expect = 5.6
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +3
Query: 42 YWIHQELKEVMGYEEQY 92
YW ++ ++EV GY++ Y
Sbjct: 27 YWDYENMQEVFGYQDNY 43
>SPBC947.11c |elg1||DNA replication factor C complex subunit
Elg1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 920
Score = 26.2 bits (55), Expect = 5.6
Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 11/120 (9%)
Frame = +3
Query: 66 EVMGYEEQYGGI----VLDP-WQPPASGTR------IEPNVFYFPVRNVHTMSPRYIEVM 212
E+ E+ GG +LDP W P S + IEP+VF+FP +++ ++
Sbjct: 189 EIKFVSEERGGTKPERLLDPLWPTPDSQSMLEYAGSIEPSVFWFPKKHLEE------AIL 242
Query: 213 RKKSHLVLRMLEQRIGQELLLPVFNKQLALATNAANTKIGSGLWGHLLLSTNLFVKAIFT 392
+ SHL + + ++ P+ K +K+ + L S F++ + +
Sbjct: 243 EETSHLSFKEVLSSTTANMITPLAEKNKTEVLQVTPSKLHTFALESLCFSPAPFIQKVLS 302
>SPAC32A11.03c |phx1||homeobox transcription factor
Phx1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 942
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -2
Query: 573 AAGRAGDPRIYVYRARVRSPVVSQVLRCFFFY*RLMSIEIWRALRSSP 430
A+G P + R S S ++F L+ I +W+ LR+SP
Sbjct: 409 ASGPVRPPNMATGHMRTSSEPTSYDSEFYYFSCTLLVIGLWKRLRASP 456
>SPBC27B12.11c |||transcription factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 738
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 104 DYTAVLFFVTHHLFQLLMYPI 42
DY A F+ HH+ QLL P+
Sbjct: 32 DYDAEYQFINHHMQQLLTRPV 52
>SPCC1840.08c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 561
Score = 25.4 bits (53), Expect = 9.8
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 249 QRIGQELLLPVFNKQLALATNAANTKIGS 335
Q + +ELL+ F ++ L TN+AN ++ S
Sbjct: 68 QGVREELLVSSFKERKLLNTNSANLRLNS 96
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,684,141
Number of Sequences: 5004
Number of extensions: 82572
Number of successful extensions: 220
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 220
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 400438000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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