Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_J09
(810 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 1.4
SPBC428.07 |meu6||meiotic chromosome segregation protein Meu6|Sc... 27 3.2
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 27 3.2
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 4.2
SPAC3A12.17c |cys12|cys1b|cysteine synthase Cys12|Schizosaccharo... 27 4.2
SPCC576.15c |ksg1||serine/threonine protein kinase Ksg1|Schizosa... 26 5.5
SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase ... 26 7.3
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 26 7.3
SPBC365.05c |slu7||splicing factor Slu7|Schizosaccharomyces pomb... 25 9.6
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 25 9.6
SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosacchar... 25 9.6
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 1.4
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -1
Query: 249 PGEGRAGRSSEPSRNRYSTGEGQGPTPVEHRARPESGAPHHR 124
P ++G+ S SR R S E + +H ARPES HR
Sbjct: 575 PSSSKSGQGSSLSR-RASKHESKHKRDSKHEARPESKHESHR 615
>SPBC428.07 |meu6||meiotic chromosome segregation protein
Meu6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 651
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 394 FSRATSRPSLRILPTTNATPAQARRAD 314
FS+ T +P + PTT TP A + D
Sbjct: 583 FSKTTIKPETPLTPTTTPTPRTAAQED 609
>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 275
Score = 27.1 bits (57), Expect = 3.2
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -1
Query: 252 GPGEGRAGRSSEPSRNRYSTGEGQGPTPVEHRARPESGAPHHRVRCTR 109
GPG R GR R +G + +P H AR S +P++ R R
Sbjct: 91 GPGSKRGGRRERGGRVHGDSGRLRSRSPSPHEAR--SRSPYNDERSDR 136
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.6 bits (56), Expect = 4.2
Identities = 21/75 (28%), Positives = 23/75 (30%), Gaps = 1/75 (1%)
Frame = -1
Query: 345 MPPLRRQDEQTLGSFSPGPRPTCHPRNTQRLGPGEGRAGRSSEPSRNRYSTGEGQGPTPV 166
MPP E G P P P P G P + GE P P
Sbjct: 285 MPPPPMHHEP--GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPF 342
Query: 165 EHRARPE-SGAPHHR 124
+H E G HHR
Sbjct: 343 KHHELEEHEGPEHHR 357
>SPAC3A12.17c |cys12|cys1b|cysteine synthase
Cys12|Schizosaccharomyces pombe|chr 1|||Manual
Length = 395
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = +1
Query: 472 VEVGVTGLRYLGLELDGRWNFRAHFEKLGPRL-MATAGSLSRLL--PNVGGPDTGVA 633
V+ + G Y + + N++AHF GP + AG L + GG G++
Sbjct: 181 VDESIPGKGYFANQFENPANWQAHFNSTGPEIWRQCAGKLDAFIAGSGTGGTIAGIS 237
>SPCC576.15c |ksg1||serine/threonine protein kinase
Ksg1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 592
Score = 26.2 bits (55), Expect = 5.5
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = -3
Query: 196 HRRGPRTDPCGTPRSTGKRSTAPPCPVHT 110
H G T P G P + A P PV T
Sbjct: 403 HENGDLTSPLGVPSMVSASTNAAPSPVGT 431
>SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase
Its3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 742
Score = 25.8 bits (54), Expect = 7.3
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 5/98 (5%)
Frame = -3
Query: 592 DSAIQPSPSVGG--PTSRNERGSSNDRPIRDRGTVTQSPRPRRGRLQSPGGPRVAALSQP 419
D ++ SP V P S N SS+ +++ SP+P R + V + QP
Sbjct: 114 DGILRDSPIVSALEPPSSN---SSSSPQLQNLKHQLSSPQPSRAPIDRSSSNPVTSSQQP 170
Query: 418 L*NSRAWDFSRATSRPSLRILP---TTNATPAQARRAD 314
+ S+ RP R ++NA P+ +R D
Sbjct: 171 PNDRSTLSSSQKAKRPLKRSYSEKNSSNAEPSGSRSGD 208
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 25.8 bits (54), Expect = 7.3
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 424 QPL*NSRAWDFSRATSRPSLRILPTTNATPAQARRADSW*FL 299
Q + ++RAW + S PT + +PAQ DSW +L
Sbjct: 517 QAMNSARAW-YIHGCYNGSATSYPTVDLSPAQRGCQDSWNYL 557
>SPBC365.05c |slu7||splicing factor Slu7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 25.4 bits (53), Expect = 9.6
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -1
Query: 261 QRLGPGEGRAGRSSEPSRNRYSTGEGQGPTPVEHR--ARPESGAPHHRVR 118
QR+G E +G S + Y G+ GP ++R A GA H+V+
Sbjct: 75 QRIGKKETPSGGRSSIEGSWYVRGKKLGPAATKYRKGACENCGAMSHKVK 124
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 25.4 bits (53), Expect = 9.6
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 13/85 (15%)
Frame = -3
Query: 658 PHHPPVEAAQHPCQA----------LRRLARADSAIQP---SPSVGGPTSRNERGSSNDR 518
P+ PP + Q+ C+ L+R R+ + +P S G PT + S D
Sbjct: 60 PNAPPQKVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDL 119
Query: 517 PIRDRGTVTQSPRPRRGRLQSPGGP 443
+R + + ++P+PRR R + P
Sbjct: 120 LLRHQQKIHRNPQPRRRRRSTTALP 144
>SPAC57A7.04c |pabp||mRNA export shuttling protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 653
Score = 25.4 bits (53), Expect = 9.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 449 WAPGGGSLPAPVKQQGLGFLEGHVEAQP 366
+ PGG +PA V +G+ + GH P
Sbjct: 484 YGPGGYPIPAAVNGRGMPMVPGHNGPMP 511
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,350,728
Number of Sequences: 5004
Number of extensions: 74407
Number of successful extensions: 248
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 248
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 394431430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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