Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_J09
(810 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 43 3e-04
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 38 0.009
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 37 0.015
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 34 0.14
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 34 0.14
Z73897-3|CAE18053.1| 178|Caenorhabditis elegans Hypothetical pr... 33 0.32
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 32 0.42
AL117200-6|CAB55058.1| 209|Caenorhabditis elegans Hypothetical ... 31 0.98
U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-... 30 1.7
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 30 1.7
AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical ... 30 1.7
AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical ... 30 1.7
Z75548-1|CAA99911.1| 776|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical p... 29 3.0
U53153-6|AAT81184.1| 638|Caenorhabditis elegans Germinal center... 29 3.0
U53153-5|AAK77641.1| 651|Caenorhabditis elegans Germinal center... 29 3.0
U53153-4|AAK77642.2| 650|Caenorhabditis elegans Germinal center... 29 3.0
U53153-3|AAC69038.1| 653|Caenorhabditis elegans Germinal center... 29 3.0
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 29 3.0
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 29 3.9
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 29 3.9
Z54236-10|CAA90986.1| 407|Caenorhabditis elegans Hypothetical p... 29 5.2
Z54235-12|CAA90977.1| 407|Caenorhabditis elegans Hypothetical p... 29 5.2
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 28 6.9
AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical ... 28 6.9
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 28 9.1
AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical ... 28 9.1
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 42.7 bits (96), Expect = 3e-04
Identities = 30/125 (24%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Frame = +3
Query: 42 LEYHGVPAYLRRLIGSYLEDRSVVCTGHGGAVLRF-PVERGVPQGSVLGPLLWNIGYDWA 218
+E G+ ++ +G+YL R ++ T H ++ + GVPQGSV+ P L + +
Sbjct: 493 MEAQGIEPKIKLWLGNYLHKR-LIRTSHDNHWSKWHTLLGGVPQGSVISPNL----FTFY 547
Query: 219 LRSALHGPLPGLSVVCYADDTLVVARGRNYQESARLACAGVAFVVGKIRRLGLDVALEKS 398
L+ ++ YADD ++AR + +++A + + ++ G+ ++ EKS
Sbjct: 548 LKDM--PTQQDTMLISYADDMSIIARDKKIEKAAEKVQLHIDEIAKYLKERGMSISAEKS 605
Query: 399 QALLF 413
+F
Sbjct: 606 TVTVF 610
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +3
Query: 144 FPVERGVPQGSVLGPLLWNIGYDWALRSALHGPLPGLSVVCYADDTLV 287
+P+ GVPQGSV GPLL+ + + + L P +++ C+ADD +
Sbjct: 875 YPISSGVPQGSVSGPLLFIL----FINNLLIDLAPTINISCFADDVKI 918
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 37.1 bits (82), Expect = 0.015
Identities = 62/230 (26%), Positives = 87/230 (37%), Gaps = 3/230 (1%)
Frame = -3
Query: 715 DXXXSQGAAPHGGSV*CNRPHHPPVEAAQHPCQALRRLARADSAIQPSPSVGGPTSRNER 536
D AA GGS NR PP + R R+ + SP G R+ R
Sbjct: 195 DGGGGSPAARRGGSA-GNRRRSPPRRGSPRRGSPRRDTRRSPPRRRGSPPARGGDRRDRR 253
Query: 535 GSSNDRPIRDRGTVTQSPRPRRGRLQSPGGPRVAALSQPL*NSRAWDFSRATS-RPSLRI 359
+ RP+RD + RR ++ A L Q S A +RA S P R
Sbjct: 254 --EDRRPVRDEKE--REEESRRREIERKKRHEEAELRQKAIASVA---ARAKSGSPRRRR 306
Query: 358 LPTTNATPAQARRADSW*FLPRATTNVSSA*HTTLRPGRGPCRALLRAQS*PIFHRRGPR 179
P+ + +P ARR S + + S A P R R+ ++ P RR P
Sbjct: 307 SPSASKSPPPARRRRS------PSQSKSPA------PKRAKSRS--KSPPAPARRRRSPS 352
Query: 178 TD--PCGTPRSTGKRSTAPPCPVHTTDLSSR*DPISRRRYAGTP*YSSAP 35
P P+ RS +PP + +S+ P RRR + + S AP
Sbjct: 353 ASKSPPPAPKRAKSRSKSPPARRRRSPSASKSPPAPRRRRSPSKSRSPAP 402
Score = 30.3 bits (65), Expect = 1.7
Identities = 44/181 (24%), Positives = 65/181 (35%), Gaps = 4/181 (2%)
Frame = -3
Query: 598 RADSAIQPSPSVGGPTSRNERGSSNDRP-IRDRGTVTQS--PRPRRGRLQSPGGPRVAAL 428
+A +++ G P R +S P R R + +QS P P+R + +S P
Sbjct: 288 KAIASVAARAKSGSPRRRRSPSASKSPPPARRRRSPSQSKSPAPKRAKSRSKSPPA---- 343
Query: 427 SQPL*NSRAWDFSRATSRPSLRILPTTNATPAQARRADSW*FLPRATTNVSSA*HTTLRP 248
P R+ S++ R + + PA+ RR+ S P A S
Sbjct: 344 --PARRRRSPSASKSPPPAPKRAKSRSKSPPARRRRSPSASKSPPAPRRRRSP-----SK 396
Query: 247 GRGPCRALLRAQS*PIFHRRGPRTDPCG-TPRSTGKRSTAPPCPVHTTDLSSR*DPISRR 71
R P + + P RR P P+ RS +PP P S P RR
Sbjct: 397 SRSPAP---KREIPPARRRRSPSASKSPPAPKRAKSRSKSPPAPRRRRSPSQSKSPAPRR 453
Query: 70 R 68
R
Sbjct: 454 R 454
Score = 28.3 bits (60), Expect = 6.9
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Frame = -1
Query: 306 SFSPGPRPTCHPRN-TQRLGPGEGRAGRSSE----PSRNRYSTGEGQGPTPVEHRARPES 142
S S P P R+ +Q P RA S+ P+R R S + P P RA+ S
Sbjct: 309 SASKSPPPARRRRSPSQSKSPAPKRAKSRSKSPPAPARRRRSPSASKSPPPAPKRAKSRS 368
Query: 141 GAPHHRVR 118
+P R R
Sbjct: 369 KSPPARRR 376
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = -3
Query: 583 IQPSPSVGGPTSRNERGSSNDRPIRDRGTVTQSPRPRRGRLQSPGGPR 440
I+ P+ G PT R +RG DR DR P R R GGPR
Sbjct: 72 IEVFPAGGAPTRRGDRGERGDR--GDRDHYRSRGAPPRDRYSDRGGPR 117
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = -3
Query: 583 IQPSPSVGGPTSRNERGSSNDRPIRDRGTVTQSPRPRRGRLQSPGGPR 440
I+ P+ G PT R +RG DR DR P R R GGPR
Sbjct: 72 IEVFPAGGAPTRRGDRGERGDR--GDRDHYRSRGAPPRDRYSDRGGPR 117
>Z73897-3|CAE18053.1| 178|Caenorhabditis elegans Hypothetical
protein ZK617.4 protein.
Length = 178
Score = 32.7 bits (71), Expect = 0.32
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = -3
Query: 604 LARADSAIQPSPSVGGPTSRNERGSSNDRPIRDRGTVTQSPRPRRGRLQSPGGPRVAALS 425
L + SA PS S GGP S++DR R T Q+P P R + G + +S
Sbjct: 45 LESSHSASSPSSSNGGPRRMFNLRSASDRQGASRPTGGQTPNPLNMRSANSSGQDLHKIS 104
Query: 424 Q 422
Q
Sbjct: 105 Q 105
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 32.3 bits (70), Expect = 0.42
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +3
Query: 147 PVERGVPQGSVLGPLLWNIGYDWALRSALHGPLPGLSVVCYADDTLV 287
P+ GVP+GSV GP L+ I + S L P +S +ADD V
Sbjct: 52 PISSGVPKGSVSGPFLFLI----FINSLLLSVPPSISCSAFADDLKV 94
>AL117200-6|CAB55058.1| 209|Caenorhabditis elegans Hypothetical
protein Y50E8A.10 protein.
Length = 209
Score = 31.1 bits (67), Expect = 0.98
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 641 RGGATPVSGPPTFGKSRLSDPAVAISRGPNFS 546
R GA +GPP KS LS A ++ PN S
Sbjct: 127 RSGAAETNGPPVTAKSALSKTAKSVPNAPNTS 158
>U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform b protein.
Length = 1169
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/78 (28%), Positives = 26/78 (33%)
Frame = -1
Query: 330 RQDEQTLGSFSPGPRPTCHPRNTQRLGPGEGRAGRSSEPSRNRYSTGEGQGPTPVEHRAR 151
RQ+ QT GP P PR + G G G Y TG G G P + A
Sbjct: 1036 RQESQTQKPRIVGP-PIRRPRPKNK-NSGGGSGGSGGSGGSRAYKTGNGNGNCPPGNEAT 1093
Query: 150 PESGAPHHRVRCTRPICP 97
+ P CP
Sbjct: 1094 TDGSGKLILCNGLEPNCP 1111
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/78 (28%), Positives = 26/78 (33%)
Frame = -1
Query: 330 RQDEQTLGSFSPGPRPTCHPRNTQRLGPGEGRAGRSSEPSRNRYSTGEGQGPTPVEHRAR 151
RQ+ QT GP P PR + G G G Y TG G G P + A
Sbjct: 1133 RQESQTQKPRIVGP-PIRRPRPKNK-NSGGGSGGSGGSGGSRAYKTGNGNGNCPPGNEAT 1190
Query: 150 PESGAPHHRVRCTRPICP 97
+ P CP
Sbjct: 1191 TDGSGKLILCNGLEPNCP 1208
>AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical
protein W05F2.4b protein.
Length = 806
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = -1
Query: 351 RRMPPLRRQDEQTLGSFSPGPRPTCHPRNTQRLGPGEGRAGRSSEPSRNRYSTGE--GQG 178
++M PL+ +L S+SP P P HP P G G + S+N+ S E Q
Sbjct: 554 QKMSPLQEVTYASLNSYSPPPPPPSHPL------PQNGSHGMARNTSQNQISYHEYTPQP 607
Query: 177 PTPVEHRARPES 142
PT + P S
Sbjct: 608 PTTQPPQRPPGS 619
>AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical
protein W05F2.4a protein.
Length = 834
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = -1
Query: 351 RRMPPLRRQDEQTLGSFSPGPRPTCHPRNTQRLGPGEGRAGRSSEPSRNRYSTGE--GQG 178
++M PL+ +L S+SP P P HP P G G + S+N+ S E Q
Sbjct: 582 QKMSPLQEVTYASLNSYSPPPPPPSHPL------PQNGSHGMARNTSQNQISYHEYTPQP 635
Query: 177 PTPVEHRARPES 142
PT + P S
Sbjct: 636 PTTQPPQRPPGS 647
>Z75548-1|CAA99911.1| 776|Caenorhabditis elegans Hypothetical
protein R90.1 protein.
Length = 776
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +2
Query: 59 PRVPPPTDRVLSRGQIGR--VHRTRWCGAPLS 148
PR P R LSR + R +HRT CGAP S
Sbjct: 564 PRASPIQQRRLSRSEKDRSGIHRTASCGAPQS 595
>Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical
protein T05F1.6 protein.
Length = 1165
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = -3
Query: 640 EAAQHPCQALRRLARADSAIQPSPSVGGPTSRNERGSSNDRPIRDRGT-VTQSPRPRRGR 464
+ +Q ++ RR R + + +PS P R RG ++ + T + + PRRGR
Sbjct: 289 QESQSSSRSTRRAKRVSATVSSTPSSNTPR-RGGRGQKSEVNADETKTPIVSNSTPRRGR 347
Query: 463 LQSPGGPR 440
S GG R
Sbjct: 348 -SSRGGDR 354
>U53153-6|AAT81184.1| 638|Caenorhabditis elegans Germinal center
kinase family protein1, isoform d protein.
Length = 638
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -3
Query: 571 PSVGGP-TSRNERGSSNDRPIRDRGTVTQ-SPRPRRGRLQSPGGPRVAALSQPL*NS 407
P+V GP S ++ G+ R R R V + SP G G P+VAA+++ L NS
Sbjct: 317 PTVRGPRVSADDDGTVRQRTDRPRAQVDRRSPSGSPGGTIVRGSPQVAAVAEQLRNS 373
>U53153-5|AAK77641.1| 651|Caenorhabditis elegans Germinal center
kinase family protein1, isoform b protein.
Length = 651
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -3
Query: 571 PSVGGP-TSRNERGSSNDRPIRDRGTVTQ-SPRPRRGRLQSPGGPRVAALSQPL*NS 407
P+V GP S ++ G+ R R R V + SP G G P+VAA+++ L NS
Sbjct: 330 PTVRGPRVSADDDGTVRQRTDRPRAQVDRRSPSGSPGGTIVRGSPQVAAVAEQLRNS 386
>U53153-4|AAK77642.2| 650|Caenorhabditis elegans Germinal center
kinase family protein1, isoform c protein.
Length = 650
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -3
Query: 571 PSVGGP-TSRNERGSSNDRPIRDRGTVTQ-SPRPRRGRLQSPGGPRVAALSQPL*NS 407
P+V GP S ++ G+ R R R V + SP G G P+VAA+++ L NS
Sbjct: 329 PTVRGPRVSADDDGTVRQRTDRPRAQVDRRSPSGSPGGTIVRGSPQVAAVAEQLRNS 385
>U53153-3|AAC69038.1| 653|Caenorhabditis elegans Germinal center
kinase family protein1, isoform a protein.
Length = 653
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -3
Query: 571 PSVGGP-TSRNERGSSNDRPIRDRGTVTQ-SPRPRRGRLQSPGGPRVAALSQPL*NS 407
P+V GP S ++ G+ R R R V + SP G G P+VAA+++ L NS
Sbjct: 332 PTVRGPRVSADDDGTVRQRTDRPRAQVDRRSPSGSPGGTIVRGSPQVAAVAEQLRNS 388
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 29.5 bits (63), Expect = 3.0
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 9/98 (9%)
Frame = -3
Query: 577 PSPSVGGPTSRNERGSSNDRPIRDRGTVTQSPRPRRGRLQSPGGPRVAALSQPL*NSRAW 398
PSPS G R R S VT +P RGR +S +V+ ++PL + +
Sbjct: 513 PSPSTPGRRGRRPRTLSTMSMEPAAAAVTPAP---RGRPRSRSAAKVSENTEPLSEAPSA 569
Query: 397 DFSRATSRPSLRIL--------PTTNATPA-QARRADS 311
R RP R P+T++T A +++RA+S
Sbjct: 570 PVKRGRGRPRSRSTMSITEDSEPSTSSTAAKRSKRAES 607
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical
protein F52B5.3 protein.
Length = 1425
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = -3
Query: 259 TLRPGRGPCRALLRAQS*PIFHRRGPRTDPCGTPRSTGKRSTAPPCPVHTTDLSS 95
T P + +ALL+ + RGP T C P ST K +PP P T +SS
Sbjct: 502 TTNPNQS-AQALLQQKRERCLMPRGPLTFTCENPASTTK---SPPSPTPTLGISS 552
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 29.1 bits (62), Expect = 3.9
Identities = 33/128 (25%), Positives = 49/128 (38%)
Frame = -3
Query: 631 QHPCQALRRLARADSAIQPSPSVGGPTSRNERGSSNDRPIRDRGTVTQSPRPRRGRLQSP 452
Q+P + ++ D A P+ PT+ + +S +P D SP QS
Sbjct: 200 QNPTTSNQKNETTDEATSSPPTTTTPTTTLKPTTSPQKP--DSTEEATSPS------QST 251
Query: 451 GGPRVAALSQPL*NSRAWDFSRATSRPSLRILPTTNATPAQARRADSW*FLPRATTNVSS 272
P VA + N + ATS P P TN T + + + LP T +
Sbjct: 252 TTP-VATQNPTTSNQKNETTDEATSSPQSAKTPVTNPTTSPQKPDTTEAALPLTTATTTK 310
Query: 271 A*HTTLRP 248
A T+ RP
Sbjct: 311 ATQTSHRP 318
>Z54236-10|CAA90986.1| 407|Caenorhabditis elegans Hypothetical
protein C09G9.6 protein.
Length = 407
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -3
Query: 649 PPVEAAQHPCQALRRLARADSAIQPSPSVGGPTSRNERGSSNDRPIRD 506
PP+ A QHP + R + D P GPT + RG + P ++
Sbjct: 222 PPLSAIQHPLEMFARPSTPDEPAAKLPL--GPTPVSTRGPRYELPTKE 267
>Z54235-12|CAA90977.1| 407|Caenorhabditis elegans Hypothetical
protein C09G9.6 protein.
Length = 407
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -3
Query: 649 PPVEAAQHPCQALRRLARADSAIQPSPSVGGPTSRNERGSSNDRPIRD 506
PP+ A QHP + R + D P GPT + RG + P ++
Sbjct: 222 PPLSAIQHPLEMFARPSTPDEPAAKLPL--GPTPVSTRGPRYELPTKE 267
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 28.3 bits (60), Expect = 6.9
Identities = 47/165 (28%), Positives = 58/165 (35%), Gaps = 3/165 (1%)
Frame = -3
Query: 589 SAIQPSPSVGGPTSRNERGSSNDRPIRDRGTVTQSPRPRRGRLQSPGGPRVAALSQP-L* 413
S +P P P +R S R TQ P RR + AA + P L
Sbjct: 236 STAKPQPRPQPPRTRPYVAPSTTTQ-RYIEPTTQRPTTRRATTKRITTTTTAAPTTPRLT 294
Query: 412 NSRAWDFSRATSRPSLRILPTTNATPAQARRADSW*FLPRATTNVSSA*HTTLRPGRGPC 233
+RA TSRP+ T AT A P ATT P R
Sbjct: 295 TARATTPLATTSRPTTPSPTTPRATTPLATT-------PLATTRAPLP---PSPPPRTSK 344
Query: 232 RALLRAQS*P--IFHRRGPRTDPCGTPRSTGKRSTAPPCPVHTTD 104
R + +A + P RR T P TPR T + T P TT+
Sbjct: 345 RPVTQAPTTPRATTTRRPTTTTPRPTPRRTRRPKTTTAAPTTTTE 389
>AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical
protein Y82E9BR.8 protein.
Length = 390
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 187 GPRTDPCGTPRSTGKRSTAPPCPVH 113
G RTDPCGTP + S P P +
Sbjct: 60 GERTDPCGTPHTAFLGSEKPIEPTY 84
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 27.9 bits (59), Expect = 9.1
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = -1
Query: 291 PRPTCHPRNTQRLGPG--EGRAGRSSEPSRNRYSTGEGQGPTPVEHRARPESGAPHHRVR 118
P P C P R GP GR G +P R +TG G P P + GAP + R
Sbjct: 146 PTP-CKPCPGGRPGPPGPPGRPGSDGQPGRP--ATGGGAAPRPGPPGPKGPRGAPGNSGR 202
Query: 117 CTRP 106
P
Sbjct: 203 AGAP 206
>AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical
protein Y59E9AL.4 protein.
Length = 1100
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 232 RALLRAQS*PIFHRRGPRTDPCGTPRSTGKR 140
RAL+ A P+ H TD GTPR++ K+
Sbjct: 733 RALVEAPKIPLIHHLFTSTDSMGTPRASLKQ 763
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,104,315
Number of Sequences: 27780
Number of extensions: 516795
Number of successful extensions: 1660
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1652
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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