Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_J06
(834 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 127 2e-29
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 127 2e-29
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 123 3e-28
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 121 1e-27
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 121 1e-27
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 120 2e-27
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 119 4e-27
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 118 1e-26
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 117 2e-26
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 117 2e-26
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 117 2e-26
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 117 2e-26
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 117 2e-26
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 116 3e-26
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 112 5e-25
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 112 5e-25
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 111 2e-24
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 111 2e-24
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 111 2e-24
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 108 1e-23
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 105 1e-22
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 82 1e-15
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 71 1e-12
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 69 1e-11
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 63 4e-10
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 45 1e-04
AF069781-1|AAC26858.1| 338|Drosophila melanogaster Bem46-like p... 30 3.4
AE014134-529|AAF51169.1| 338|Drosophila melanogaster CG18642-PA... 30 3.4
BT021949-1|AAX51654.1| 819|Drosophila melanogaster LD12033p pro... 29 5.9
AE014296-2720|AAF49474.1| 819|Drosophila melanogaster CG16807-P... 29 5.9
AY094731-1|AAM11084.1| 708|Drosophila melanogaster GH25793p pro... 29 7.8
AE014298-1934|AAF48296.2| 1384|Drosophila melanogaster CG2691-PA... 29 7.8
AE013599-3336|AAM68207.1| 751|Drosophila melanogaster CG13503-P... 29 7.8
AE013599-3335|AAM68206.1| 751|Drosophila melanogaster CG13503-P... 29 7.8
AE013599-3334|AAM68205.1| 751|Drosophila melanogaster CG13503-P... 29 7.8
AE013599-3333|AAF46800.2| 751|Drosophila melanogaster CG13503-P... 29 7.8
AE013599-3332|AAM68204.1| 708|Drosophila melanogaster CG13503-P... 29 7.8
AE013599-3331|AAM68208.2| 761|Drosophila melanogaster CG13503-P... 29 7.8
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 127 bits (307), Expect = 2e-29
Identities = 64/152 (42%), Positives = 93/152 (61%), Gaps = 4/152 (2%)
Frame = +3
Query: 9 FPGTWKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYI----LLRPE 176
FP WK+ I+++ KPGK P SYRPI+LLS + KL+ERL+ R++ + +L
Sbjct: 489 FPKQWKMAAILMIHKPGKPEESPESYRPISLLSSLSKLWERLIANRLNDIMTERRILPDH 548
Query: 177 QFGFRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLP 356
QFGFR GHST Q+ R+ H+ + +Y AV +D+++AFDRVWH+GL+ K++ P
Sbjct: 549 QFGFRQGHSTVEQVHRLTKHILQAFDDKEYCNAVFIDMQQAFDRVWHDGLISKVKKL-FP 607
Query: 357 HAHVRLLGSYLEGRTFFVAVEGARSSVRPITA 452
+ +L SYLE R F V V + S R + A
Sbjct: 608 APYYGVLKSYLEDRRFMVRVRNSYSIPRVMRA 639
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 127 bits (307), Expect = 2e-29
Identities = 71/152 (46%), Positives = 94/152 (61%), Gaps = 4/152 (2%)
Frame = +3
Query: 9 FPGTWKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYIL---LRPE- 176
FP WKLG I ++ KPGK R+P+SYRPI+LL + K+FERL+ RI + + PE
Sbjct: 488 FPYQWKLGIISMIHKPGKPEREPASYRPISLLPSISKVFERLIAVRIVSIMEAQGITPEH 547
Query: 177 QFGFRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLP 356
QFGFR+GH T QL RV+ + +S +Y ++ LDI +AFDRVWH GL K++ LP
Sbjct: 548 QFGFRAGHCTVEQLHRVVEQILTAYDSKEYCNSLFLDIREAFDRVWHIGLQLKIKQT-LP 606
Query: 357 HAHVRLLGSYLEGRTFFVAVEGARSSVRPITA 452
+ LL SYLEGR F V A S+ + A
Sbjct: 607 APYFGLLKSYLEGRRFAVRFHSAISTEHNVAA 638
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 123 bits (297), Expect = 3e-28
Identities = 63/145 (43%), Positives = 89/145 (61%), Gaps = 4/145 (2%)
Frame = +3
Query: 9 FPGTWKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYI----LLRPE 176
FP WK I+++PKPGKD+ +PSSYRPI+LL+ + KLFE++LL RISP++ L
Sbjct: 484 FPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTH 543
Query: 177 QFGFRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLP 356
QFGFR H T Q+ R+ + +Y A+ LD+ +AFDRVW +GL+ K+ LP
Sbjct: 544 QFGFREKHGTIEQVNRITSEIRTAFEHREYCTAIFLDVAQAFDRVWLDGLLFKIIKL-LP 602
Query: 357 HAHVRLLGSYLEGRTFFVAVEGARS 431
+LL SYL R F + + + S
Sbjct: 603 QNTHKLLKSYLYNRVFAIRCDTSTS 627
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 121 bits (292), Expect = 1e-27
Identities = 65/152 (42%), Positives = 93/152 (61%), Gaps = 4/152 (2%)
Frame = +3
Query: 9 FPGTWKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRI---SPYILLRPE- 176
FP WK II++ K GK SYRPI+LL +GK+ ERL+L R+ P+
Sbjct: 292 FPKAWKSASIIMIHKTGKTPTDVDSYRPISLLPSLGKIMERLILNRLLTCKDVTKAIPKF 351
Query: 177 QFGFRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLP 356
QFGFR H T QL RV++ + + +Y V LDI++AFDRVWH GL++K + P
Sbjct: 352 QFGFRLQHGTPEQLHRVVNFALEAMENKEYAVGAFLDIQQAFDRVWHPGLLYKAKRLFPP 411
Query: 357 HAHVRLLGSYLEGRTFFVAVEGARSSVRPITA 452
++ ++ S+LE RTF V+V+G +SS++PI A
Sbjct: 412 QLYL-VVKSFLEERTFHVSVDGYKSSIKPIAA 442
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 121 bits (291), Expect = 1e-27
Identities = 62/145 (42%), Positives = 88/145 (60%), Gaps = 4/145 (2%)
Frame = +3
Query: 9 FPGTWKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYI----LLRPE 176
FP WK I+++PKPGKD+ +PSSYRPI+LL+ + KLFE++LL RISP++ L
Sbjct: 484 FPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTH 543
Query: 177 QFGFRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLP 356
QFGFR H T Q+ R+ + +Y A+ LD+ +AFDRVW +GL+ K+ LP
Sbjct: 544 QFGFREKHGTIEQVNRITSEIRTAFEHREYCTAIFLDVAQAFDRVWLDGLLFKIIKL-LP 602
Query: 357 HAHVRLLGSYLEGRTFFVAVEGARS 431
+LL SYL F + + + S
Sbjct: 603 QNTHKLLKSYLYNTVFAIRCDTSTS 627
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 120 bits (290), Expect = 2e-27
Identities = 65/152 (42%), Positives = 91/152 (59%), Gaps = 4/152 (2%)
Frame = +3
Query: 9 FPGTWKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISP----YILLRPE 176
FP WK+ KII++PKPGK+ SSYRPI+LLS + KLFE+ LL R++ + ++
Sbjct: 486 FPQRWKMMKIIMIPKPGKNHTVASSYRPISLLSCISKLFEKCLLIRLNQHQTYHNIIPAH 545
Query: 177 QFGFRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLP 356
QFGFR H T Q+ R+ + +Y AV LD+ +AFD+VW +GL+ K++ LP
Sbjct: 546 QFGFRESHGTIEQVNRITTEIRTAFEYREYCTAVFLDVSQAFDKVWLDGLMFKIK-ISLP 604
Query: 357 HAHVRLLGSYLEGRTFFVAVEGARSSVRPITA 452
+ +LL SYL R F V A S+V I A
Sbjct: 605 ESTHKLLKSYLYDRKFAVRCNTATSTVHTIEA 636
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 119 bits (287), Expect = 4e-27
Identities = 64/152 (42%), Positives = 92/152 (60%), Gaps = 4/152 (2%)
Frame = +3
Query: 9 FPGTWKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRI---SPYILLRPE- 176
FP WK II++ K GK SYRP +LL +GK+ ERL+L R+ P+
Sbjct: 490 FPKAWKSASIIMIHKTGKTPTDVDSYRPTSLLPSLGKIMERLILNRLLTCKDVTKAIPKF 549
Query: 177 QFGFRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLP 356
QFGFR H T QL RV++ + + +Y V LDI++AFDRVWH GL++K + P
Sbjct: 550 QFGFRLQHGTPEQLHRVVNFALEAMENKEYAVGAFLDIQQAFDRVWHPGLLYKAKRLFPP 609
Query: 357 HAHVRLLGSYLEGRTFFVAVEGARSSVRPITA 452
++ ++ S+LE RTF V+V+G +SS++PI A
Sbjct: 610 QLYL-VVKSFLEERTFHVSVDGYKSSIKPIAA 640
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 118 bits (284), Expect = 1e-26
Identities = 64/146 (43%), Positives = 86/146 (58%), Gaps = 4/146 (2%)
Frame = +3
Query: 9 FPGTWKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYILLRP----E 176
+P WK ++ ++ KPGK +P SYRPI+LLS + K+FERLLL+R+ L +
Sbjct: 545 YPEAWKHAQVKMILKPGKSSNEPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH 604
Query: 177 QFGFRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLP 356
QFGFR H T Q+ RV + + +Y AV LDI +AFDRVWHEGL+ KL LP
Sbjct: 605 QFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LP 663
Query: 357 HAHVRLLGSYLEGRTFFVAVEGARSS 434
+ +L SYL RTF V + +S
Sbjct: 664 YNLYIILESYLTNRTFEVKDQAGETS 689
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 117 bits (281), Expect = 2e-26
Identities = 64/146 (43%), Positives = 85/146 (58%), Gaps = 4/146 (2%)
Frame = +3
Query: 9 FPGTWKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYILLRP----E 176
+P WK ++ ++ KPGK P SYRPI+LLS + K+FERLLL+R+ L +
Sbjct: 417 YPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH 476
Query: 177 QFGFRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLP 356
QFGFR H T Q+ RV + + +Y AV LDI +AFDRVWHEGL+ KL LP
Sbjct: 477 QFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LP 535
Query: 357 HAHVRLLGSYLEGRTFFVAVEGARSS 434
+ +L SYL RTF V + +S
Sbjct: 536 YNLYIILESYLTNRTFEVKDQAGETS 561
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 117 bits (281), Expect = 2e-26
Identities = 64/146 (43%), Positives = 85/146 (58%), Gaps = 4/146 (2%)
Frame = +3
Query: 9 FPGTWKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYILLRP----E 176
+P WK ++ ++ KPGK P SYRPI+LLS + K+FERLLL+R+ L +
Sbjct: 533 YPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH 592
Query: 177 QFGFRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLP 356
QFGFR H T Q+ RV + + +Y AV LDI +AFDRVWHEGL+ KL LP
Sbjct: 593 QFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LP 651
Query: 357 HAHVRLLGSYLEGRTFFVAVEGARSS 434
+ +L SYL RTF V + +S
Sbjct: 652 YNLYIILESYLTNRTFEVKDQAGETS 677
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 117 bits (281), Expect = 2e-26
Identities = 64/146 (43%), Positives = 85/146 (58%), Gaps = 4/146 (2%)
Frame = +3
Query: 9 FPGTWKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYILLRP----E 176
+P WK ++ ++ KPGK P SYRPI+LLS + K+FERLLL+R+ L +
Sbjct: 533 YPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH 592
Query: 177 QFGFRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLP 356
QFGFR H T Q+ RV + + +Y AV LDI +AFDRVWHEGL+ KL LP
Sbjct: 593 QFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LP 651
Query: 357 HAHVRLLGSYLEGRTFFVAVEGARSS 434
+ +L SYL RTF V + +S
Sbjct: 652 YNLYIILESYLTNRTFEVKDQAGETS 677
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 117 bits (281), Expect = 2e-26
Identities = 64/146 (43%), Positives = 85/146 (58%), Gaps = 4/146 (2%)
Frame = +3
Query: 9 FPGTWKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYILLRP----E 176
+P WK ++ ++ KPGK P SYRPI+LLS + K+FERLLL+R+ L +
Sbjct: 495 YPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH 554
Query: 177 QFGFRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLP 356
QFGFR H T Q+ RV + + +Y AV LDI +AFDRVWHEGL+ KL LP
Sbjct: 555 QFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LP 613
Query: 357 HAHVRLLGSYLEGRTFFVAVEGARSS 434
+ +L SYL RTF V + +S
Sbjct: 614 YNLYIILESYLTNRTFEVKDQAGETS 639
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 117 bits (281), Expect = 2e-26
Identities = 64/146 (43%), Positives = 85/146 (58%), Gaps = 4/146 (2%)
Frame = +3
Query: 9 FPGTWKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYILLRP----E 176
+P WK ++ ++ KPGK P SYRPI+LLS + K+FERLLL+R+ L +
Sbjct: 533 YPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH 592
Query: 177 QFGFRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLP 356
QFGFR H T Q+ RV + + +Y AV LDI +AFDRVWHEGL+ KL LP
Sbjct: 593 QFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LP 651
Query: 357 HAHVRLLGSYLEGRTFFVAVEGARSS 434
+ +L SYL RTF V + +S
Sbjct: 652 YNLYIILESYLTNRTFEVKDQAGETS 677
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 116 bits (280), Expect = 3e-26
Identities = 63/146 (43%), Positives = 86/146 (58%), Gaps = 4/146 (2%)
Frame = +3
Query: 9 FPGTWKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYILLRP----E 176
+P WK ++ ++ KPGK +P SYRPI+LLS + K+FERLLL+R+ L +
Sbjct: 533 YPEAWKHAQVKMILKPGKSANEPRSYRPISLLSGLSKIFERLLLKRLFKVDLFKKAIPLH 592
Query: 177 QFGFRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLP 356
QFGFR H + Q+ RV + + +Y AV LDI +AFDRVWHEGL+ KL LP
Sbjct: 593 QFGFRKEHGSEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LP 651
Query: 357 HAHVRLLGSYLEGRTFFVAVEGARSS 434
+ +L SYL RTF V + +S
Sbjct: 652 YNLYIILESYLTNRTFEVKDQAGETS 677
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 112 bits (270), Expect = 5e-25
Identities = 58/152 (38%), Positives = 92/152 (60%), Gaps = 4/152 (2%)
Frame = +3
Query: 9 FPGTWKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYI----LLRPE 176
FP WK+ KI+ + KPGK P SYRPI+LLS + K+ E+L+ R+ ++ L
Sbjct: 513 FPRDWKIAKIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTV 572
Query: 177 QFGFRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLP 356
Q+GFR+G +T L ++ +++ + S Q V LDIE AFD VWH+GL+HKL+ G P
Sbjct: 573 QYGFRNGLNTILPTLKLRNYIKESIQSKQSVGLVTLDIEAAFDTVWHDGLLHKLKMIGTP 632
Query: 357 HAHVRLLGSYLEGRTFFVAVEGARSSVRPITA 452
++++ ++L R F V + ++S+ R + A
Sbjct: 633 IYLIKIVQNFLTHRYFSVNLNSSQSARRILNA 664
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 112 bits (270), Expect = 5e-25
Identities = 58/152 (38%), Positives = 92/152 (60%), Gaps = 4/152 (2%)
Frame = +3
Query: 9 FPGTWKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYI----LLRPE 176
FP WK+ KI+ + KPGK P SYRPI+LLS + K+ E+L+ R+ ++ L
Sbjct: 461 FPRDWKIAKIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTV 520
Query: 177 QFGFRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLP 356
Q+GFR+G +T L ++ +++ + S Q V LDIE AFD VWH+GL+HKL+ G P
Sbjct: 521 QYGFRNGLNTILPTLKLRNYIKESIQSKQSVGLVTLDIEAAFDTVWHDGLLHKLKMIGTP 580
Query: 357 HAHVRLLGSYLEGRTFFVAVEGARSSVRPITA 452
++++ ++L R F V + ++S+ R + A
Sbjct: 581 IYLIKIVQNFLTHRYFSVNLNSSQSARRILNA 612
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 111 bits (266), Expect = 2e-24
Identities = 63/146 (43%), Positives = 82/146 (56%), Gaps = 4/146 (2%)
Frame = +3
Query: 9 FPGTWKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRR---ISPYILLRP-E 176
FP WK I ++PKPGK +SYRPI+LLS + KL ER+LL+R I + P
Sbjct: 89 FPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSH 148
Query: 177 QFGFRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLP 356
QFGFR H QL RV + + A LDI +AFDRVWH+GL++KL +P
Sbjct: 149 QFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKLSRL-IP 207
Query: 357 HAHVRLLGSYLEGRTFFVAVEGARSS 434
LL +YL RTF V ++G +S
Sbjct: 208 RYLFDLLENYLSNRTFSVRIDGETTS 233
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 111 bits (266), Expect = 2e-24
Identities = 63/146 (43%), Positives = 82/146 (56%), Gaps = 4/146 (2%)
Frame = +3
Query: 9 FPGTWKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRR---ISPYILLRP-E 176
FP WK I ++PKPGK +SYRPI+LLS + KL ER+LL+R I + P
Sbjct: 536 FPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSH 595
Query: 177 QFGFRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLP 356
QFGFR H QL RV + + A LDI +AFDRVWH+GL++KL +P
Sbjct: 596 QFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKLSRL-IP 654
Query: 357 HAHVRLLGSYLEGRTFFVAVEGARSS 434
LL +YL RTF V ++G +S
Sbjct: 655 RYLFDLLENYLSNRTFSVRIDGETTS 680
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 111 bits (266), Expect = 2e-24
Identities = 63/146 (43%), Positives = 82/146 (56%), Gaps = 4/146 (2%)
Frame = +3
Query: 9 FPGTWKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRR---ISPYILLRP-E 176
FP WK I ++PKPGK +SYRPI+LLS + KL ER+LL+R I + P
Sbjct: 536 FPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSH 595
Query: 177 QFGFRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLP 356
QFGFR H QL RV + + A LDI +AFDRVWH+GL++KL +P
Sbjct: 596 QFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKLSRL-IP 654
Query: 357 HAHVRLLGSYLEGRTFFVAVEGARSS 434
LL +YL RTF V ++G +S
Sbjct: 655 RYLFDLLENYLSNRTFSVRIDGETTS 680
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 108 bits (259), Expect = 1e-23
Identities = 62/146 (42%), Positives = 81/146 (55%), Gaps = 4/146 (2%)
Frame = +3
Query: 9 FPGTWKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRR---ISPYILLRPE- 176
FP WK I ++PKPGK +SYRPI+LLS + KL ER+L +R I + P
Sbjct: 536 FPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILPKRLYDIDSFAKAIPSH 595
Query: 177 QFGFRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLP 356
QFGFR H QL RV + + A LDI +AFDRVWH+GL++KL +P
Sbjct: 596 QFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKLSRL-IP 654
Query: 357 HAHVRLLGSYLEGRTFFVAVEGARSS 434
LL +YL RTF V ++G +S
Sbjct: 655 RYLFDLLENYLSNRTFSVRIDGETTS 680
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 105 bits (251), Expect = 1e-22
Identities = 61/146 (41%), Positives = 85/146 (58%), Gaps = 4/146 (2%)
Frame = +3
Query: 9 FPGTWKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYI----LLRPE 176
FP WK II++PKP KD+ +PS YRPI+LL+ + KLFE+ LL RISP++ L
Sbjct: 26 FPQKWKKSIIIMIPKPEKDKTQPS-YRPISLLTCLSKLFEKGLLLRISPHLKTHNTLPSY 84
Query: 177 QFGFRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLP 356
QF F + H Q+ R+ + +Y A+ LD+ +AFDRVW +GL+ K+ LP
Sbjct: 85 QFDFPAKHGAIEQVNRITTEIRTAFEHREYCTALFLDVAQAFDRVWLDGLMFKIIQL-LP 143
Query: 357 HAHVRLLGSYLEGRTFFVAVEGARSS 434
+LL SYL+ R F V + SS
Sbjct: 144 QNIHKLLKSYLDKRVFAVRCSSSTSS 169
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 81.8 bits (193), Expect = 1e-15
Identities = 45/146 (30%), Positives = 79/146 (54%), Gaps = 4/146 (2%)
Frame = +3
Query: 9 FPGTWKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYI----LLRPE 176
+P TW+ II + KP K +SYRPI+LLS +GK E+++ +R++ +I L+
Sbjct: 488 YPHTWRSAIIIPISKPNKPPSDINSYRPISLLSCLGKTLEKIIAQRLTWFIKRHNLISHN 547
Query: 177 QFGFRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLP 356
Q F+S HST L R+ H ++ ++ + + D E+AFDRV ++ +L G+
Sbjct: 548 QVAFKSNHSTMDALLRIQHFASNALSTKNHVSILATDFERAFDRVGIHAVLCRLERWGIG 607
Query: 357 HAHVRLLGSYLEGRTFFVAVEGARSS 434
L+ +++ R+F V + S+
Sbjct: 608 PRLYNLIKAFMTNRSFRVRINNVTSN 633
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 71.3 bits (167), Expect = 1e-12
Identities = 54/154 (35%), Positives = 78/154 (50%), Gaps = 13/154 (8%)
Frame = +3
Query: 9 FPGTWKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRI-----SPYILLRP 173
FP WK K+++L K P SYRP+ LL VGKLFER+L RI SP L+
Sbjct: 454 FPKRWKKMKLVLLLKGKGPANVPRSYRPLCLLDIVGKLFERILYARIELITESP-TGLQG 512
Query: 174 EQFGFRSGHSTTLQLTRVL----HHLADRR---NSGQYTVAVLLDIEKAFDRVWHEGLVH 332
+Q+GFR G ST L V L R S +Y + LD++ AF+ ++
Sbjct: 513 QQYGFRKGKSTLDALKSVTDAARKALDGNRWLGGSKKYCAIITLDVKNAFNTARWPIILG 572
Query: 333 KLRDAGLPHAHVRLLGSYLEGRT-FFVAVEGARS 431
+R+ G+P ++G+Y R ++V +G RS
Sbjct: 573 AMRNLGVPDYIRGVIGNYFRDRVLWYVTEDGPRS 606
Score = 42.3 bits (95), Expect = 8e-04
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = +2
Query: 452 TAEHTLARCSGFDEQRAALVAVIGEDLSLPRVVATMLGSDASW 580
TAEH L CS F E+RA LVA+ G LS +VA M+ W
Sbjct: 922 TAEHILLHCSRFAEERAQLVALAGSPLSPRGLVAAMMADKIVW 964
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 68.5 bits (160), Expect = 1e-11
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Frame = +3
Query: 12 PGTWKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYI----LLRPEQ 179
P +K II + KP D+ K SSYRPI+L + K+ ++++ +R+ + L+ +Q
Sbjct: 484 PQAYKTSLIIPILKPNTDKTKTSSYRPISLNCCIAKILDKIIAKRLWWLVTYNNLINDKQ 543
Query: 180 FGFRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPH 359
FGF+ G ST+ L V + + S +T V LD +AFDRV ++ +L++
Sbjct: 544 FGFKKGKSTSDCLLYVDYLIT---KSKMHTSLVTLDFSRAFDRVGVHSIIQQLQEWKTGP 600
Query: 360 AHVRLLGSYLEGRTFFVAVEGARSSVRPI 446
++ + +++ R V V SS P+
Sbjct: 601 KIIKYIKNFMSNRKITVRVGPHTSSPLPL 629
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 63.3 bits (147), Expect = 4e-10
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 5/152 (3%)
Frame = +3
Query: 9 FPGTWKLGKIIVLPK-PGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYILLRPE--- 176
FP WK +++ L K P KD+ +PSSYR I LL GK+ E +++ R+ + PE
Sbjct: 486 FPAEWKCPRVVSLLKGPDKDKCEPSSYRGICLLPVFGKVLEAIMVNRVREVL---PEGCR 542
Query: 177 -QFGFRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGL 353
QFGFR G V + ++ QY + +D + AFD V + +L D G
Sbjct: 543 WQFGFRQGRCVEDAWRHVKSSVG--ASAAQYVLGTFVDFKGAFDNVEWSAALSRLADLGC 600
Query: 354 PHAHVRLLGSYLEGRTFFVAVEGARSSVRPIT 449
+ L S+ GR + V P+T
Sbjct: 601 --REMGLWQSFFSGRRAVIRSSSGTVEV-PVT 629
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 44.8 bits (101), Expect = 1e-04
Identities = 34/130 (26%), Positives = 55/130 (42%)
Frame = +3
Query: 6 DFPGTWKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYILLRPEQFG 185
+ P + +L + + +PK +R P +RPI++ S + + +L R++ I P Q G
Sbjct: 390 NLPHSIRLARTVFIPKTVTAKR-PQDFRPISVPSVLVRQLNAILATRLNSSINWDPRQRG 448
Query: 186 FRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAH 365
F T V L + LD+ KAFD + H + LR G P
Sbjct: 449 FLPTDGCADNATIVDLVLRHSHKHFRSCYIANLDVSKAFDSLSHASIYDTLRAYGAPKGF 508
Query: 366 VRLLGSYLEG 395
V + + EG
Sbjct: 509 VDYVQNTYEG 518
>AF069781-1|AAC26858.1| 338|Drosophila melanogaster Bem46-like
protein protein.
Length = 338
Score = 30.3 bits (65), Expect = 3.4
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = -3
Query: 559 HRSHDARQREVLSYDRDEGGALLVESRA--TRQRVFRCAVMGRTEDRAPSTATKKVLPS- 389
H HD +++ + R GGA++V+ A + CA++ T P A + V P+
Sbjct: 171 HTRHDLDHSQLILFGRSLGGAVVVDVAADTVYGQKLMCAIVENTFSSIPEMAVELVHPAV 230
Query: 388 RYDPS 374
+Y P+
Sbjct: 231 KYIPN 235
>AE014134-529|AAF51169.1| 338|Drosophila melanogaster CG18642-PA
protein.
Length = 338
Score = 30.3 bits (65), Expect = 3.4
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = -3
Query: 559 HRSHDARQREVLSYDRDEGGALLVESRA--TRQRVFRCAVMGRTEDRAPSTATKKVLPS- 389
H HD +++ + R GGA++V+ A + CA++ T P A + V P+
Sbjct: 171 HTRHDLDHSQLILFGRSLGGAVVVDVAADTVYGQKLMCAIVENTFSSIPEMAVELVHPAV 230
Query: 388 RYDPS 374
+Y P+
Sbjct: 231 KYIPN 235
>BT021949-1|AAX51654.1| 819|Drosophila melanogaster LD12033p
protein.
Length = 819
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -2
Query: 242 CQVMQDTGQLQSRRVAASKAELLRPEENIRRYSPQEQPLEQLAHVREQG 96
CQ+M++ G++++ R A S E E ++ +PQ+ A VR +G
Sbjct: 141 CQLMEEEGRVRALRAARSLGERTVTELILQHQNPQQLSSNLWAAVRTRG 189
>AE014296-2720|AAF49474.1| 819|Drosophila melanogaster CG16807-PA
protein.
Length = 819
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -2
Query: 242 CQVMQDTGQLQSRRVAASKAELLRPEENIRRYSPQEQPLEQLAHVREQG 96
CQ+M++ G++++ R A S E E ++ +PQ+ A VR +G
Sbjct: 141 CQLMEEEGRVRALRAARSLGERTVTELILQHQNPQQLSSNLWAAVRTRG 189
>AY094731-1|AAM11084.1| 708|Drosophila melanogaster GH25793p
protein.
Length = 708
Score = 29.1 bits (62), Expect = 7.8
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 540 GSERSSPMTATRAARCSSN-PEQRASVCSAVP*WDAR 433
GSE SSP T+ + RC+ N P+ R SV P AR
Sbjct: 441 GSESSSPNTSAGSMRCAPNPPKSRPSVKPPPPPTPAR 477
>AE014298-1934|AAF48296.2| 1384|Drosophila melanogaster CG2691-PA
protein.
Length = 1384
Score = 29.1 bits (62), Expect = 7.8
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +1
Query: 58 ARTGESPPVTDRLPCSRTWASCSSGCS*GEYRRIFSSGRSNSAL 189
A TG +P T + +T+AS SGCS ++++ +S RS+SAL
Sbjct: 101 APTGTAP--TGTIKTFQTFASNYSGCSNTCFQKLVTSFRSSSAL 142
>AE013599-3336|AAM68207.1| 751|Drosophila melanogaster CG13503-PD,
isoform D protein.
Length = 751
Score = 29.1 bits (62), Expect = 7.8
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 540 GSERSSPMTATRAARCSSN-PEQRASVCSAVP*WDAR 433
GSE SSP T+ + RC+ N P+ R SV P AR
Sbjct: 441 GSESSSPNTSAGSMRCAPNPPKSRPSVKPPPPPTPAR 477
>AE013599-3335|AAM68206.1| 751|Drosophila melanogaster CG13503-PC,
isoform C protein.
Length = 751
Score = 29.1 bits (62), Expect = 7.8
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 540 GSERSSPMTATRAARCSSN-PEQRASVCSAVP*WDAR 433
GSE SSP T+ + RC+ N P+ R SV P AR
Sbjct: 441 GSESSSPNTSAGSMRCAPNPPKSRPSVKPPPPPTPAR 477
>AE013599-3334|AAM68205.1| 751|Drosophila melanogaster CG13503-PB,
isoform B protein.
Length = 751
Score = 29.1 bits (62), Expect = 7.8
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 540 GSERSSPMTATRAARCSSN-PEQRASVCSAVP*WDAR 433
GSE SSP T+ + RC+ N P+ R SV P AR
Sbjct: 441 GSESSSPNTSAGSMRCAPNPPKSRPSVKPPPPPTPAR 477
>AE013599-3333|AAF46800.2| 751|Drosophila melanogaster CG13503-PA,
isoform A protein.
Length = 751
Score = 29.1 bits (62), Expect = 7.8
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 540 GSERSSPMTATRAARCSSN-PEQRASVCSAVP*WDAR 433
GSE SSP T+ + RC+ N P+ R SV P AR
Sbjct: 441 GSESSSPNTSAGSMRCAPNPPKSRPSVKPPPPPTPAR 477
>AE013599-3332|AAM68204.1| 708|Drosophila melanogaster CG13503-PF,
isoform F protein.
Length = 708
Score = 29.1 bits (62), Expect = 7.8
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 540 GSERSSPMTATRAARCSSN-PEQRASVCSAVP*WDAR 433
GSE SSP T+ + RC+ N P+ R SV P AR
Sbjct: 441 GSESSSPNTSAGSMRCAPNPPKSRPSVKPPPPPTPAR 477
>AE013599-3331|AAM68208.2| 761|Drosophila melanogaster CG13503-PE,
isoform E protein.
Length = 761
Score = 29.1 bits (62), Expect = 7.8
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 540 GSERSSPMTATRAARCSSN-PEQRASVCSAVP*WDAR 433
GSE SSP T+ + RC+ N P+ R SV P AR
Sbjct: 451 GSESSSPNTSAGSMRCAPNPPKSRPSVKPPPPPTPAR 487
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,688,021
Number of Sequences: 53049
Number of extensions: 713819
Number of successful extensions: 2699
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 2402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2657
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3962724636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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