Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_I24
(790 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 29 2.9
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 29 2.9
Z81119-8|CAB03340.1| 504|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z32679-2|CAA83592.1| 385|Caenorhabditis elegans Hypothetical pr... 29 5.0
AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical ... 29 5.0
U80836-5|AAB37892.2| 621|Caenorhabditis elegans Hypothetical pr... 28 6.6
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 28 6.6
AF068710-4|AAK72089.3| 340|Caenorhabditis elegans Serpentine re... 28 8.8
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical
protein F29D11.1 protein.
Length = 4753
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = +3
Query: 168 WHGQGESDCLIKTKHCDGPRGC*RNVISAQCSECQREEIQASAG 299
W+ G C+ + K CDG + C QCS+ + AG
Sbjct: 267 WNCPGTGHCIDQLKLCDGSKDCADGADEQQCSQNLCPSLGCQAG 310
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL
receptor-related protein protein.
Length = 4753
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = +3
Query: 168 WHGQGESDCLIKTKHCDGPRGC*RNVISAQCSECQREEIQASAG 299
W+ G C+ + K CDG + C QCS+ + AG
Sbjct: 267 WNCPGTGHCIDQLKLCDGSKDCADGADEQQCSQNLCPSLGCQAG 310
>Z81119-8|CAB03340.1| 504|Caenorhabditis elegans Hypothetical
protein T10H4.10 protein.
Length = 504
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 13 DTRENRLTFRTGSGPAFSGLPRIFLAVRSCRFRFVRDRHDSVRPPFN 153
D +L R G +G IF VR RF++ R D++ PFN
Sbjct: 200 DPEFEKLVSRLAKGFENTGFLDIFCPVRILESRFLKWRQDTIFEPFN 246
>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical protein
F54B3.1b protein.
Length = 3394
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -2
Query: 552 FSDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKP 433
F DD K ++ S + ESSSTGSS +D P+P
Sbjct: 1429 FLDDEEKTITDNSSSASSEDSDSDESSSTGSSSSSDDPRP 1468
>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical protein
F54B3.1a protein.
Length = 3396
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -2
Query: 552 FSDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKP 433
F DD K ++ S + ESSSTGSS +D P+P
Sbjct: 1429 FLDDEEKTITDNSSSASSEDSDSDESSSTGSSSSSDDPRP 1468
>Z32679-2|CAA83592.1| 385|Caenorhabditis elegans Hypothetical
protein C05B5.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -2
Query: 555 FFSDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPAPLAVVSLDS 403
F+S+ A RS + P+MS + +++T + PA S K A + D+
Sbjct: 46 FYSNITAPRSTSVLAPVMSSLEVYINTTTTSAFAPAQSIKVADILEEDADA 96
>AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical
protein Y53C10A.4 protein.
Length = 908
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = -2
Query: 549 SDDRAKRSPTYATP----LMSPYNARLESSSTGSSFPADSPKPAP 427
+DD R P + + L PY + SSS+ SS P+D P P P
Sbjct: 681 NDDSDSRFPAFKSSSVAMLTEPYKSSSSSSSSTSSIPSD-PAPRP 724
>U80836-5|AAB37892.2| 621|Caenorhabditis elegans Hypothetical
protein B0432.7 protein.
Length = 621
Score = 28.3 bits (60), Expect = 6.6
Identities = 26/79 (32%), Positives = 39/79 (49%)
Frame = +2
Query: 401 LLSSETTAKGAGLGESAGKEDPVELDSSLAL*GDMRGVA*VGDRFARSSLKNHYFHCFIT 580
+ S TT+ + +S+ ++ LD AL G +R VA + DR R SLKN F+T
Sbjct: 32 IFSLATTSAARYVSDSSA-DNTTRLDE--ALNGMIRYVADM-DRATRLSLKNQQLKEFLT 87
Query: 581 YSVGRKRCAVDNIGGRTVF 637
Y+ + NI R+ F
Sbjct: 88 YTPVILNASTTNIVTRSKF 106
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 662 WRKRSSPFKTPA*SGSXTLXGGEFDWGGTSVKNNAGV 772
W+K KTPA SG+ T GTS ++ AGV
Sbjct: 611 WKKFRQTQKTPAPSGASTSGASTSKPSGTSPESGAGV 647
>AF068710-4|AAK72089.3| 340|Caenorhabditis elegans Serpentine
receptor, class j protein16 protein.
Length = 340
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -3
Query: 749 MYRPSQTPRLXVSSNRITREF*TATSVSATSPLCTLERTPCARRYYRP 606
M + TP + V++ + ++ A SV P+C + +PC +Y P
Sbjct: 226 MKKLRDTPAMSVTTKNMHKQLFRALSVQTIIPIC-ISFSPCLAAWYGP 272
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,109,213
Number of Sequences: 27780
Number of extensions: 350567
Number of successful extensions: 968
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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