Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_I12
(841 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 34 0.12
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 33 0.37
05_03_0366 - 13102147-13102281,13102560-13102739,13102791-131029... 32 0.49
07_03_1136 + 24218601-24218734,24218769-24219906 31 1.1
11_01_0242 - 1862106-1862210,1862302-1862320,1863082-1863257,186... 31 1.5
07_03_1747 + 29188568-29188715,29188793-29189541 31 1.5
11_06_0411 - 23230580-23230795,23231407-23231862,23232142-232321... 30 2.0
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 2.0
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 3.5
08_02_1291 + 25930056-25930067,25930289-25930334,25930434-259305... 29 3.5
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 28 8.1
04_03_0571 - 17269005-17269927,17270433-17270688,17272492-17273301 28 8.1
02_01_0296 + 1978565-1981197,1981216-1981639,1982280-1982771,198... 28 8.1
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 28 8.1
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/51 (37%), Positives = 22/51 (43%)
Frame = -3
Query: 839 GPWPXPXXXXPXXPPXKPFLXGGRXGXPPXXXARGPXGGXRXPPPKGLXXG 687
GP P P P PP P GG+ G PP +G G R P G+ G
Sbjct: 352 GPPPPPPPKGPSPPPPPP--PGGKKGGPPPPPPKG--GASRPPAAPGVPTG 398
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/57 (35%), Positives = 21/57 (36%)
Frame = -3
Query: 836 PWPXPXXXXPXXPPXKPFLXGGRXGXPPXXXARGPXGGXRXPPPKGLXXGXVSGXPP 666
P P P P PP P G PP +GP PPP G G G PP
Sbjct: 328 PPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGP--SPPPPPPPG---GKKGGPPP 379
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Frame = -3
Query: 836 PWPXPXXXXPXXPPXK---PFLXGGRXGXPPXXXARGPXGGXRXPPPKG 699
P P P P PP K P PP G GG PPPKG
Sbjct: 336 PPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKG 384
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -2
Query: 831 AXPXXXXPXXPXPKTLSXGGPPRPPXXXXSQGPP 730
A P P P P + G PP PP S PP
Sbjct: 334 AAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPP 367
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -2
Query: 825 PXXXXPXXPXPKTLSXGGPPRPPXXXXSQGPP 730
P P P P GGPP PP + PP
Sbjct: 359 PKGPSPPPPPPPGGKKGGPPPPPPKGGASRPP 390
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 32.7 bits (71), Expect = 0.37
Identities = 22/58 (37%), Positives = 23/58 (39%)
Frame = -3
Query: 839 GPWPXPXXXXPXXPPXKPFLXGGRXGXPPXXXARGPXGGXRXPPPKGLXXGXVSGXPP 666
GP P P P P P G G PP A G GG PPP L G + PP
Sbjct: 348 GPPPPP----PPAAPAAPRPPGPGPGPPPPPGAAGRGGG--GPPPPALPGGPRARGPP 399
>05_03_0366 -
13102147-13102281,13102560-13102739,13102791-13102992,
13104385-13104575
Length = 235
Score = 32.3 bits (70), Expect = 0.49
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -3
Query: 308 HQPSAAAPFPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQM-QGQVDYDFGVGG 144
H P AAA P VP++ P L + GG GL S S + G + D G+GG
Sbjct: 7 HSPRAAAAAPSVPSR-LPRPFLLSLSSPSRGGSGLVAASASAVAAGGSEGDGGIGG 61
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +1
Query: 700 PLGGGXRXPPXGPLAXXXGGXPXRPPXRKGFXGGXXGXXXXGXGQG 837
PLGGG PP G GG P PP G G G G G
Sbjct: 100 PLGGGGARPPGG---GGGGGPPSLPPGAGGGGGARPPAPGGGGGGG 142
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +1
Query: 700 PLGGGXRXPPXGPLAXXXGGXPXRPPXRKGFXGGXXGXXXXGXGQG 837
P GGG PP P GG RPP G GG G G G
Sbjct: 109 PGGGGGGGPPSLP-PGAGGGGGARPPAPGGGGGGGAPRRVLGGGGG 153
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 706 GGGXRXPPXGPLAXXXGGXPXRPPXRKGFXGGXXGXXXXG 825
GGG P P GG P R P G GG G G
Sbjct: 176 GGGGGGPGRAPGGGGGGGGPGRAPGGGGGGGGLGGGGGEG 215
>11_01_0242 -
1862106-1862210,1862302-1862320,1863082-1863257,
1863359-1863405,1864443-1865022
Length = 308
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = -3
Query: 800 PPXKPFLXGGRXGXPPXXXARGPXGGXRXPPPKGLXXGXVSGXPP 666
P +P+ GG G PP GG PP G G PP
Sbjct: 66 PSTQPYGSGGGYGAPPSTQRPQSYGGGYGAPPSSQPYGAPYGAPP 110
>07_03_1747 + 29188568-29188715,29188793-29189541
Length = 298
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +1
Query: 361 PPPGTTLSAPVYLITAPSPG*SAWTLALQFLCS*TIGPTTCRLARSSSVLG 513
PPP TT++ V L TA + S + QF+C+ TTC + S S+ G
Sbjct: 213 PPPTTTMAQHVVLPTAAA---SCHQMQDQFVCARAAETTTCCWSESESLPG 260
>11_06_0411 -
23230580-23230795,23231407-23231862,23232142-23232195,
23232251-23232367
Length = 280
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 206 VRVHRADTGRSSNELDRQTTELERRGMGLQHLAGVLGTL 322
V+ H + R S EL+RQ ELER+G L+ G L +
Sbjct: 89 VQRHGEELERQSRELERQREELERQGRELKMKDGKLNRM 127
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = -3
Query: 830 PXPXXXXPXXPPXKPFLXGGRXGXPPXXXARGPXGGXRXPPPKGLXXGXVSGXP 669
P P PP P G R G PP GG PPP G V G P
Sbjct: 1150 PPPPVGGLGGPPAPPPPAGFRGGTPPP----NAHGGVAPPPPPPRGHGGVGGPP 1199
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = -3
Query: 836 PWPXPXXXXPXXPPXKPFLXGGRXGXPPXXXARGPXGGXRXPPPKGLXXGXVSGXPP 666
P P P PP P G PP GG PPP G G + PP
Sbjct: 1110 PPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPP 1166
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +1
Query: 688 PXXRPLGG--GXRXPPXGPLAXXXGGXPXRPP 777
P P+GG G + PP PL GG P PP
Sbjct: 1122 PPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPP 1153
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/48 (29%), Positives = 17/48 (35%)
Frame = -3
Query: 809 PXXPPXKPFLXGGRXGXPPXXXARGPXGGXRXPPPKGLXXGXVSGXPP 666
P PP P + G + PP + P PPP L PP
Sbjct: 747 PPAPPPPPLMTGKKAPAPPPPPPQAPKPPGTVPPPPPLHGASGRPHPP 794
>08_02_1291 +
25930056-25930067,25930289-25930334,25930434-25930546,
25930645-25930930,25931357-25931421,25931642-25931693,
25931774-25931883,25932611-25932641,25932853-25933004,
25934622-25934840
Length = 361
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 221 HGGLGLTNVSMSQMQGQVDYDFGVGGRLPI 132
+GG L ++Q G Y +G GGRLP+
Sbjct: 100 YGGPALPRYGIAQFPGGSGYPYGYGGRLPM 129
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = -3
Query: 824 PXXXXPXXPPXKPFLXGGRXGXPPXXXARGPXGGXRXPPPKGLXXGXVSGXPP 666
P P PP KP G G P P G PPP+ + G PP
Sbjct: 227 PPLPPPPPPPPKPANIAGAPGLPLPPPPPPPPG----PPPREIVPGQTLLPPP 275
>04_03_0571 - 17269005-17269927,17270433-17270688,17272492-17273301
Length = 662
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 703 LGGGXRXPPXGPLAXXXGG 759
L GG R PP GP+A GG
Sbjct: 59 LAGGDRHPPPGPIACARGG 77
>02_01_0296 +
1978565-1981197,1981216-1981639,1982280-1982771,
1982950-1983087
Length = 1228
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 390 GRGERSPRRWLQPRLAVPRQASTSVPRTP 304
GRG RS R L+P LA+ A + +P P
Sbjct: 442 GRGPRSTLRILRPGLAISEMARSMLPAEP 470
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = -3
Query: 335 VRPPQAFRGHQPSAAAPFPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQMQGQV 168
++PP H + AP P +P+ S P++ + PH S +QM Q+
Sbjct: 551 LQPPAHMLPHAQGSRAPLPQLPSMSGPPPVNPPLPPMPHPMAMQVQGSSNQMMPQM 606
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,169,437
Number of Sequences: 37544
Number of extensions: 557384
Number of successful extensions: 1841
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1793
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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