Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_I08
(809 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1136 + 24218601-24218734,24218769-24219906 35 0.067
02_05_0686 - 30900748-30902167,30903442-30904742 35 0.088
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 34 0.15
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 33 0.36
07_01_0373 + 2783596-2784933 31 0.82
09_02_0543 + 10427321-10428315,10428440-10429154 31 1.4
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 30 2.5
07_01_0080 + 587674-588510 29 3.3
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 29 3.3
07_03_1542 + 27577257-27577559,27577653-27577730,27577900-275779... 29 4.4
02_04_0382 - 22501041-22501279,22501717-22501810 29 4.4
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 29 4.4
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 5.8
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 5.8
03_06_0252 - 32656068-32656276,32656361-32656550,32656682-326567... 29 5.8
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 28 7.6
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 28 7.6
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 28 7.6
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 35.1 bits (77), Expect = 0.067
Identities = 21/58 (36%), Positives = 21/58 (36%)
Frame = -2
Query: 565 GGXFXXKXGXPPXXXXXGXXGGXPXXXXXXXGGPXXXPPXGXXGXGFLGGXGGXGKXP 392
GG G PP G G GGP P G G G LGG GG G P
Sbjct: 162 GGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGGGGG-LGGGGGEGGAP 218
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/68 (32%), Positives = 22/68 (32%), Gaps = 6/68 (8%)
Frame = -2
Query: 568 GGGXFXXKXGXPPXXXXXGXXGGXPXXXXXXXGGPXXXPPXGXXGXG------FLGGXGG 407
GGG G G GG P GG PP G G LGG GG
Sbjct: 94 GGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGG 153
Query: 406 XGKXPPPP 383
G PP
Sbjct: 154 GGALARPP 161
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 34.7 bits (76), Expect = 0.088
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +3
Query: 402 PXPPXPPKXPXPXXPXGGXXXGPPXXXXXXXGXPPXXP 515
P PP P K P P P G PP G PP P
Sbjct: 344 PPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPP 381
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/54 (37%), Positives = 20/54 (37%)
Frame = +3
Query: 408 PPXPPKXPXPXXPXGGXXXGPPXXXXXXXGXPPXXPXXXXXGGXPXFXXNXPPP 569
PP PPK P P P G PP PP P GG P PPP
Sbjct: 337 PPPPPKGPPPPPPAKGP---PPPPPPKGPSPPPPPPPGGKKGGPP-----PPPP 382
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 2/57 (3%)
Frame = +3
Query: 402 PXPPXPPKXPXPXXPXGGXXXGPPXXXXXXXGXP--PXXPXXXXXGGXPXFXXNXPP 566
P PP PPK P P G PP P P P GG PP
Sbjct: 326 PPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPP 382
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 402 PXPPXPPKXPXPXXPXGGXXXGPPXXXXXXXGXPPXXP 515
P PP P P P P G PP PP P
Sbjct: 356 PPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPPAAP 393
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 33.9 bits (74), Expect = 0.15
Identities = 24/92 (26%), Positives = 29/92 (31%), Gaps = 4/92 (4%)
Frame = +3
Query: 306 GXXGNQYRXVSPIXKXVPXXXXLXXLGGGGXFPXPPXPPKX----PXPXXPXGGXXXGPP 473
G G+Q P+ + + +GG G P PP P P P G PP
Sbjct: 1129 GLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPP 1188
Query: 474 XXXXXXXGXPPXXPXXXXXGGXPXFXXNXPPP 569
G PP P P PPP
Sbjct: 1189 PRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPP 1220
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/67 (34%), Positives = 23/67 (34%), Gaps = 4/67 (5%)
Frame = +3
Query: 381 LGGGGXFPXPPX-PPKXPXPXXPXGGXXXGPPXXXXXXXGX---PPXXPXXXXXGGXPXF 548
LG G P PP P P P GG PP G PP P GG P
Sbjct: 1092 LGDYGVAPPPPSIGAGAPPPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVP-- 1149
Query: 549 XXNXPPP 569
PPP
Sbjct: 1150 ---PPPP 1153
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 387 GGGXFPXPPXPPKXPXPXXPXGGXXXGPPXXXXXXXGXPP 506
G G PP PP P P P G PP PP
Sbjct: 1191 GHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGRGLPAPP 1230
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 4/58 (6%)
Frame = +3
Query: 387 GGGXFPXPPXPPKXPXPXXPXGGXXXGPPXXXXXXXG----XPPXXPXXXXXGGXPXF 548
G G P PP PP P P G PP G PP P G P F
Sbjct: 344 GAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPPALPGGPRARGPPPF 401
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = +3
Query: 387 GGGXFPXPPXPPKXPXPXXPXGGXXXGPPXXXXXXXGXPPXXPXXXXXGGXPXFXXNXPP 566
GGG P P PP P P P P PP P G PP
Sbjct: 268 GGGQVPAAPPPPAGPPPPAP---PPLPPSHHHHHGHHPPPPHPLPPGAGAGAGTGAPPPP 324
Query: 567 P 569
P
Sbjct: 325 P 325
>07_01_0373 + 2783596-2784933
Length = 445
Score = 31.5 bits (68), Expect = 0.82
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = -1
Query: 92 EEEKALTKEGMAEAAETXKGTISSMNRS 9
E+++ LTK G + +ET KG++ S++RS
Sbjct: 151 EQQQQLTKSGCSSTSETSKGSVLSLSRS 178
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/56 (28%), Positives = 16/56 (28%)
Frame = +3
Query: 402 PXPPXPPKXPXPXXPXGGXXXGPPXXXXXXXGXPPXXPXXXXXGGXPXFXXNXPPP 569
P PP P P P GPP PP P P PPP
Sbjct: 13 PAPPRPTPAPQATPPPAIPESGPPPPPAPDMPPPPPTPAPQSSPAPPPAPDMTPPP 68
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 402 PXPPXPPKXPXPXXPXGGXXXGPPXXXXXXXGXPPXXP 515
P PP PP P P P PP PP P
Sbjct: 353 PPPPPPPPPPPPPPPPPPPRPPPPPPPIKKGAPPPAPP 390
>07_01_0080 + 587674-588510
Length = 278
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +3
Query: 381 LGGGGXFPXPPXPPKXPXPXXPXGGXXXGPPXXXXXXXGXPP 506
LGG G F PP PP P P G PP PP
Sbjct: 82 LGGDGMFRRPPPPP----PPPPSSGSPPPPPPPPPPPPPPPP 119
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/54 (29%), Positives = 18/54 (33%)
Frame = +3
Query: 408 PPXPPKXPXPXXPXGGXXXGPPXXXXXXXGXPPXXPXXXXXGGXPXFXXNXPPP 569
PP PP+ P P P P G P P G P + PPP
Sbjct: 273 PPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPPPPPPLANGPP---RSIPPP 323
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +3
Query: 417 PPKXPXPXXPXGGXXXGPPXXXXXXXGXPPXXPXXXXXGGXPXFXXNXPPP 569
PP+ P P P PP G PP P G P PPP
Sbjct: 264 PPRPPPPQVPPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPP----PPPP 310
>07_03_1542 +
27577257-27577559,27577653-27577730,27577900-27577999,
27578677-27578819,27579242-27579478
Length = 286
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/50 (30%), Positives = 19/50 (38%)
Frame = -2
Query: 472 GGPXXXPPXGXXGXGFLGGXGGXGKXPPPPXFXKXXFXGTXXKMGETFRY 323
GG P G G +GG G PPPP T ++ FR+
Sbjct: 59 GGADGSPAGKPRGYGLVGGANGAMAPPPPPTTKSTAVETTVERVIFDFRF 108
>02_04_0382 - 22501041-22501279,22501717-22501810
Length = 110
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2
Query: 427 FLGGXGGXGKXPPPP 383
+ GG GG GK PPPP
Sbjct: 88 YYGGGGGYGKPPPPP 102
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/55 (36%), Positives = 21/55 (38%)
Frame = -2
Query: 565 GGXFXXKXGXPPXXXXXGXXGGXPXXXXXXXGGPXXXPPXGXXGXGFLGGXGGXG 401
GG + PP G GG P GGP PP G G GG GG G
Sbjct: 365 GGAPGGQGSLPPSYD--GGYGGRPMPGG---GGPGAPPPYHGGGGGGGGGGGGGG 414
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.7 bits (61), Expect = 5.8
Identities = 23/67 (34%), Positives = 23/67 (34%), Gaps = 5/67 (7%)
Frame = +3
Query: 384 GGGGXFPXPPXPPKXP--XPXXPXGG--XXXGPPXXXXXXXGXPPXXPXXXXXG-GXPXF 548
G G FP PP PP P P G GPP PP P G G P
Sbjct: 657 GIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPP-----PPPLPPANRTNGPGVPSA 711
Query: 549 XXNXPPP 569
PPP
Sbjct: 712 PPPPPPP 718
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 402 PXPPXPPKXPXPXXPXGGXXXGPP 473
P PP PP P P P GPP
Sbjct: 54 PPPPPPPGPPPPHQPQFNFGPGPP 77
>03_06_0252 - 32656068-32656276,32656361-32656550,32656682-32656780,
32656917-32657012,32657200-32658153,32658476-32658694,
32658911-32659120,32659241-32659503,32659605-32661281,
32663639-32663792
Length = 1356
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +2
Query: 182 RFRRLLRPRSDLPWDGLLNV*SSLFQRLVLRSYWAPKPNXTGXL 313
R + + LPW L+ S +L +YW P P T L
Sbjct: 1140 RLKPIKEKAGTLPWKSLIAQASMASVKLTEHAYWTPDPTFTSYL 1183
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 402 PXPPXPPKXPXPXXPXGGXXXGPP 473
P PP PP P P P G PP
Sbjct: 615 PPPPRPPGAPPPPPPPGKPGGPPP 638
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 402 PXPPXPPKXPXPXXPXGGXXXGPP 473
P PP PP P P P G PP
Sbjct: 920 PPPPRPPGAPPPPPPPGKPGGPPP 943
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/61 (27%), Positives = 17/61 (27%)
Frame = +3
Query: 387 GGGXFPXPPXPPKXPXPXXPXGGXXXGPPXXXXXXXGXPPXXPXXXXXGGXPXFXXNXPP 566
G P PP PP P P P PP P G P PP
Sbjct: 199 GPSTLPPPPPPPPLPASSEPVDPSAASLPPLPP----PPPPPPKPANIAGAPGLPLPPPP 254
Query: 567 P 569
P
Sbjct: 255 P 255
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.140 0.453
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,835,935
Number of Sequences: 37544
Number of extensions: 346651
Number of successful extensions: 1343
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1118
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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