Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_I08
(809 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.079
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.079
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.18
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 33 0.32
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 33 0.32
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.3
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.3
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.3
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.3
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 29 3.9
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 29 5.2
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 29 5.2
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 28 6.9
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 28 6.9
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 9.1
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 28 9.1
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 28 9.1
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.7 bits (76), Expect = 0.079
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 3/59 (5%)
Frame = +3
Query: 402 PXPPXPPKX---PXPXXPXGGXXXGPPXXXXXXXGXPPXXPXXXXXGGXPXFXXNXPPP 569
P PP PP P P P G PP PP P G P PPP
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
Score = 33.1 bits (72), Expect = 0.24
Identities = 22/62 (35%), Positives = 22/62 (35%), Gaps = 3/62 (4%)
Frame = +3
Query: 393 GXFPXPPXPPKX---PXPXXPXGGXXXGPPXXXXXXXGXPPXXPXXXXXGGXPXFXXNXP 563
G P PP PP P P P G GPP G PP P G P P
Sbjct: 282 GMTPRPPPPPSSGMWPPPPPPPPGRTPGPP----GMPGMPPPPPPSRF--GPPGMGGMPP 335
Query: 564 PP 569
PP
Sbjct: 336 PP 337
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/66 (30%), Positives = 21/66 (31%), Gaps = 7/66 (10%)
Frame = +3
Query: 393 GXFPXPPXPPKXPXPXXPX-------GGXXXGPPXXXXXXXGXPPXXPXXXXXGGXPXFX 551
G P PP P P P P GG PP G PP P G +
Sbjct: 305 GRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYP 364
Query: 552 XNXPPP 569
PPP
Sbjct: 365 --PPPP 368
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.7 bits (76), Expect = 0.079
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 3/59 (5%)
Frame = +3
Query: 402 PXPPXPPKX---PXPXXPXGGXXXGPPXXXXXXXGXPPXXPXXXXXGGXPXFXXNXPPP 569
P PP PP P P P G PP PP P G P PPP
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
Score = 33.1 bits (72), Expect = 0.24
Identities = 22/62 (35%), Positives = 22/62 (35%), Gaps = 3/62 (4%)
Frame = +3
Query: 393 GXFPXPPXPPKX---PXPXXPXGGXXXGPPXXXXXXXGXPPXXPXXXXXGGXPXFXXNXP 563
G P PP PP P P P G GPP G PP P G P P
Sbjct: 292 GMTPRPPPPPSSGMWPPPPPPPPGRTPGPP----GMPGMPPPPPPSRF--GPPGMGGMPP 345
Query: 564 PP 569
PP
Sbjct: 346 PP 347
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/66 (30%), Positives = 21/66 (31%), Gaps = 7/66 (10%)
Frame = +3
Query: 393 GXFPXPPXPPKXPXPXXPX-------GGXXXGPPXXXXXXXGXPPXXPXXXXXGGXPXFX 551
G P PP P P P P GG PP G PP P G +
Sbjct: 315 GRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYP 374
Query: 552 XNXPPP 569
PPP
Sbjct: 375 --PPPP 378
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/60 (28%), Positives = 19/60 (31%)
Frame = +3
Query: 390 GGXFPXPPXPPKXPXPXXPXGGXXXGPPXXXXXXXGXPPXXPXXXXXGGXPXFXXNXPPP 569
GG P PP PP+ P P PP PP P P + PP
Sbjct: 134 GGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPP 193
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 32.7 bits (71), Expect = 0.32
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -2
Query: 562 GXFXXKXGXPPXXXXXGXXGGXPXXXXXXXGGPXXXPPXGXXGXGFLGGXGGXGKXPP 389
G F G PP G G P G P G G G G GG G PP
Sbjct: 146 GMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPP 203
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = -2
Query: 541 GXPPXXXXXGXXGGXPXXXXXXXGGPXXXPPXGXXGXGFLGGXGGXGKXPP 389
G PP G G G PP G G G GG GG G P
Sbjct: 172 GGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGGMLP 222
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 32.7 bits (71), Expect = 0.32
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -2
Query: 562 GXFXXKXGXPPXXXXXGXXGGXPXXXXXXXGGPXXXPPXGXXGXGFLGGXGGXGKXPP 389
G F G PP G G P G P G G G G GG G PP
Sbjct: 426 GMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPP 483
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = -2
Query: 541 GXPPXXXXXGXXGGXPXXXXXXXGGPXXXPPXGXXGXGFLGGXGGXGKXPP 389
G PP G G G PP G G G GG GG G P
Sbjct: 452 GGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGGMLP 502
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = +3
Query: 384 GGGGXFPXPPXPPKXPXPXXPXGGXXXGPPXXXXXXXGXPPXXPXXXXXGGXPXFXXNXP 563
GG P PP P P G PP PP P GG P P
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP----PP 788
Query: 564 PP 569
PP
Sbjct: 789 PP 790
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/76 (30%), Positives = 24/76 (31%)
Frame = +3
Query: 339 PIXKXVPXXXXLXXLGGGGXFPXPPXPPKXPXPXXPXGGXXXGPPXXXXXXXGXPPXXPX 518
PI P L + GG PP PP P G PP G PP P
Sbjct: 708 PITGGPPPPPGLPPITGG----PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP--PP 761
Query: 519 XXXXGGXPXFXXNXPP 566
GG P PP
Sbjct: 762 PPPPGGCPPPPPPPPP 777
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = +3
Query: 390 GGXFPXPPXPPKXPXPXXPXGGXXXGPPXXXXXXXGXPPXXPXXXXXGGXPXFXXNXPPP 569
GG P P PP P P PP G PP P GG P PPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPP------PPGGLPPITGGPPPPPPP---GGLPPISGGPPPP 761
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Frame = +3
Query: 357 PXXXXLXXLGGGGXFPXPP---XPPKXPXPXXPXGGXXXGPP 473
P L + GG P PP PP P P P GG GPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPP--PPPPPPPGGFKGGPP 785
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = +3
Query: 384 GGGGXFPXPPXPPKXPXPXXPXGGXXXGPPXXXXXXXGXPPXXPXXXXXGGXPXFXXNXP 563
GG P PP P P G PP PP P GG P P
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP----PP 788
Query: 564 PP 569
PP
Sbjct: 789 PP 790
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/76 (30%), Positives = 24/76 (31%)
Frame = +3
Query: 339 PIXKXVPXXXXLXXLGGGGXFPXPPXPPKXPXPXXPXGGXXXGPPXXXXXXXGXPPXXPX 518
PI P L + GG PP PP P G PP G PP P
Sbjct: 708 PITGGPPPPPGLPPITGG----PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP--PP 761
Query: 519 XXXXGGXPXFXXNXPP 566
GG P PP
Sbjct: 762 PPPPGGCPPPPPPPPP 777
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = +3
Query: 390 GGXFPXPPXPPKXPXPXXPXGGXXXGPPXXXXXXXGXPPXXPXXXXXGGXPXFXXNXPPP 569
GG P P PP P P PP G PP P GG P PPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPP------PPGGLPPITGGPPPPPPP---GGLPPISGGPPPP 761
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Frame = +3
Query: 357 PXXXXLXXLGGGGXFPXPP---XPPKXPXPXXPXGGXXXGPP 473
P L + GG P PP PP P P P GG GPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPP--PPPPPPPGGFKGGPP 785
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = +3
Query: 384 GGGGXFPXPPXPPKXPXPXXPXGGXXXGPPXXXXXXXGXPPXXPXXXXXGGXPXFXXNXP 563
GG P PP P P G PP PP P GG P P
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP----PP 371
Query: 564 PP 569
PP
Sbjct: 372 PP 373
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/76 (30%), Positives = 24/76 (31%)
Frame = +3
Query: 339 PIXKXVPXXXXLXXLGGGGXFPXPPXPPKXPXPXXPXGGXXXGPPXXXXXXXGXPPXXPX 518
PI P L + GG PP PP P G PP G PP P
Sbjct: 291 PITGGPPPPPGLPPITGG----PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP--PP 344
Query: 519 XXXXGGXPXFXXNXPP 566
GG P PP
Sbjct: 345 PPPPGGCPPPPPPPPP 360
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = +3
Query: 390 GGXFPXPPXPPKXPXPXXPXGGXXXGPPXXXXXXXGXPPXXPXXXXXGGXPXFXXNXPPP 569
GG P P PP P P PP G PP P GG P PPP
Sbjct: 294 GGPPPPPGLPPITGGPPPPP------PPGGLPPITGGPPPPPPP---GGLPPISGGPPPP 344
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Frame = +3
Query: 357 PXXXXLXXLGGGGXFPXPP---XPPKXPXPXXPXGGXXXGPP 473
P L + GG P PP PP P P P GG GPP
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPP--PPPPPPPGGFKGGPP 368
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/60 (31%), Positives = 19/60 (31%), Gaps = 6/60 (10%)
Frame = +3
Query: 408 PPXPPKXPXPXXPXGG----XXXGPPXXXXXXXGXPP--XXPXXXXXGGXPXFXXNXPPP 569
PP PP P P GG G P G PP P G P PPP
Sbjct: 272 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 331
Score = 29.1 bits (62), Expect = 3.9
Identities = 26/96 (27%), Positives = 29/96 (30%)
Frame = +3
Query: 282 GXRNQIXQGXXGNQYRXVSPIXKXVPXXXXLXXLGGGGXFPXPPXPPKXPXPXXPXGGXX 461
G + Q G G + + P L G G PP PP P P G
Sbjct: 216 GQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGS---PPPPPAAGSPPPPRTGSP 272
Query: 462 XGPPXXXXXXXGXPPXXPXXXXXGGXPXFXXNXPPP 569
PP G PP P G P PPP
Sbjct: 273 PPPP------TGSPPPPP---AGGSPPPPRAGSPPP 299
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/60 (31%), Positives = 19/60 (31%), Gaps = 6/60 (10%)
Frame = +3
Query: 408 PPXPPKXPXPXXPXGG----XXXGPPXXXXXXXGXPP--XXPXXXXXGGXPXFXXNXPPP 569
PP PP P P GG G P G PP P G P PPP
Sbjct: 293 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 352
Score = 29.1 bits (62), Expect = 3.9
Identities = 26/96 (27%), Positives = 29/96 (30%)
Frame = +3
Query: 282 GXRNQIXQGXXGNQYRXVSPIXKXVPXXXXLXXLGGGGXFPXPPXPPKXPXPXXPXGGXX 461
G + Q G G + + P L G G PP PP P P G
Sbjct: 237 GQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGS---PPPPPAAGSPPPPRTGSP 293
Query: 462 XGPPXXXXXXXGXPPXXPXXXXXGGXPXFXXNXPPP 569
PP G PP P G P PPP
Sbjct: 294 PPPP------TGSPPPPP---AGGSPPPPRAGSPPP 320
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/60 (31%), Positives = 19/60 (31%), Gaps = 6/60 (10%)
Frame = +3
Query: 408 PPXPPKXPXPXXPXGG----XXXGPPXXXXXXXGXPP--XXPXXXXXGGXPXFXXNXPPP 569
PP PP P P GG G P G PP P G P PPP
Sbjct: 278 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 337
Score = 29.1 bits (62), Expect = 3.9
Identities = 26/96 (27%), Positives = 29/96 (30%)
Frame = +3
Query: 282 GXRNQIXQGXXGNQYRXVSPIXKXVPXXXXLXXLGGGGXFPXPPXPPKXPXPXXPXGGXX 461
G + Q G G + + P L G G PP PP P P G
Sbjct: 222 GQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGS---PPPPPAAGSPPPPRTGSP 278
Query: 462 XGPPXXXXXXXGXPPXXPXXXXXGGXPXFXXNXPPP 569
PP G PP P G P PPP
Sbjct: 279 PPPP------TGSPPPPP---AGGSPPPPRAGSPPP 305
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +3
Query: 402 PXPPXPPKXPXPXXPXGGXXXGPPXXXXXXXGXPPXXPXXXXXG 533
P P PP P P P GPP PP P G
Sbjct: 238 PSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGPPTRRPPG 281
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +3
Query: 402 PXPPXPPKXPXPXXPXGGXXXGPPXXXXXXXGXPPXXPXXXXXGGXPXFXXNXPPP 569
P P PP P P P G G P PP P G P PP
Sbjct: 255 PGPAGPPGPPGPIGPPG--QPGAPGSSQPGPQGPPGDPGIDGAPGNPGSPGEPGPP 308
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/59 (27%), Positives = 17/59 (28%)
Frame = +3
Query: 393 GXFPXPPXPPKXPXPXXPXGGXXXGPPXXXXXXXGXPPXXPXXXXXGGXPXFXXNXPPP 569
G +P PP P P P G P G PP GG PP
Sbjct: 1296 GIYPGPPAPGNLPGSSRPSGNRKQPLPPPPPMIRGPPPDQMYRDRSGGGGGSMRGGFPP 1354
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/59 (27%), Positives = 17/59 (28%)
Frame = +3
Query: 393 GXFPXPPXPPKXPXPXXPXGGXXXGPPXXXXXXXGXPPXXPXXXXXGGXPXFXXNXPPP 569
G +P PP P P P G P G PP GG PP
Sbjct: 1296 GIYPGPPAPGNLPGSSRPSGNRKQPLPPPPPMIRGPPPDQMYRDRSGGGGGSMRGGFPP 1354
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.3 bits (60), Expect = 6.9
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 4/65 (6%)
Frame = +3
Query: 387 GGGXFPXPPXPPKXPXP----XXPXGGXXXGPPXXXXXXXGXPPXXPXXXXXGGXPXFXX 554
GG P PP P P P P GG GPP P P G P
Sbjct: 250 GGSSRPGPPGPAGPPGPPGNNGAPGGGYGVGPP--GPPGPSGRPGAPGQPGPDGQPGAPG 307
Query: 555 NXPPP 569
N P
Sbjct: 308 NDGTP 312
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 7/57 (12%)
Frame = +3
Query: 387 GGGXFPXPPXPPKXP-------XPXXPXGGXXXGPPXXXXXXXGXPPXXPXXXXXGG 536
GG P PP PP P P P G G P PP P GG
Sbjct: 269 GGAAQPGPPGPPGPPGNDGQPGGPGQPGGPGQDGGPGTDAAYCPCPPRTPAGGGGGG 325
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -2
Query: 568 GGGXFXXKXGXPPXXXXXGXXGGXPXXXXXXXGGPXXXPPXGXXGXGFLGGXGGXG 401
GGG G G GG GG PP G G GG GG G
Sbjct: 75 GGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCG 130
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +3
Query: 384 GGGGXF-PXPPXPPKXPXPXXPXGG 455
GGGG + P PP P P P GG
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGG 75
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +3
Query: 384 GGGGXF-PXPPXPPKXPXPXXPXGG 455
GGGG + P PP P P P GG
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGG 75
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.140 0.453
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,250,637
Number of Sequences: 27780
Number of extensions: 237217
Number of successful extensions: 899
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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