Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_I03
         (800 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0025 - 15577231-15577420,15577682-15577813,15578025-155781...    29   5.7  
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805...    29   5.7  
10_07_0132 + 13263577-13263732,13265391-13265456,13265607-132657...    28   7.5  
11_05_0025 + 18461288-18461968                                         28   9.9  

>06_03_0025 -
           15577231-15577420,15577682-15577813,15578025-15578173,
           15579012-15579071,15593208-15593297,15593604-15593871,
           15594517-15594608,15595355-15595441,15597333-15597440,
           15597709-15597822,15598253-15598420,15599442-15599579,
           15599699-15599908,15600986-15601237,15601965-15602111,
           15603327-15603443
          Length = 773

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = -2

Query: 388 YYKSEILEELHPSHHGEVWEQITKIAQALSSIYQYIAGNFP*LREAHVVEYFIC 227
           Y K+  +EE   S  G V+   + I   LS+I + + G+ P  +  HVVE   C
Sbjct: 466 YMKTFYMEESTFSFSGNVYVGQSDIFDTLSNIRKKLKGDCPREKIVHVVEKLHC 519


>06_01_1032 +
           8055678-8055782,8055875-8055936,8057302-8057507,
           8057595-8058314,8058404-8058603,8058988-8059172,
           8059287-8059354,8059432-8060246,8060502-8060599,
           8060702-8060887,8061358-8061538,8061651-8061812,
           8061894-8061937,8062059-8062115,8062409-8062505,
           8062614-8062786,8062868-8063081,8063270-8063395,
           8064072-8064188,8064459-8064566,8064729-8064898,
           8065049-8065127,8065211-8065285,8065845-8065942,
           8066030-8066137,8066238-8066295,8066527-8066631,
           8067461-8069516,8069804-8070697,8070896-8071852,
           8072022-8072075,8072157-8072222,8072294-8073472,
           8073868-8075598,8075764-8075829,8076763-8077788,
           8077893-8078041
          Length = 4264

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +1

Query: 154 GPDQTFGRMSGDRGSAQYRSDGAGHK*NIRQHELPAVKG 270
           GP  + G  +G RGS    +DG+G K N    E PA+ G
Sbjct: 510 GPPASEGGSAGQRGSESRMADGSG-KENGNSQENPAIFG 547


>10_07_0132 +
           13263577-13263732,13265391-13265456,13265607-13265705,
           13267020-13267084,13267210-13267294,13267389-13267422,
           13267539-13267642,13268085-13268408,13269090-13269605
          Length = 482

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +2

Query: 269 EVTGYILIYRTKGLRNLGDLFPNLTVVRGMQLFKDFALVIFDNE 400
           E +G + ++  KG++NL    P++ +V G+     F  ++FD +
Sbjct: 234 EASGLLAVF--KGMKNLPVGMPSVLIVTGLTWLSWFPFILFDTD 275


>11_05_0025 + 18461288-18461968
          Length = 226

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = -2

Query: 454 DASSLDLHQRIQSKRL*MFIVKYYKSEILEELHPSHHGEVWEQITKIAQALSSI 293
           D   LDL   +  K+     ++   +++L   HPS    + EQIT  AQ +  +
Sbjct: 81  DLMRLDLRDGVPVKKSLFDWIRTASTDVLTSSHPSSTRRILEQITLEAQLIGRV 134


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,974,847
Number of Sequences: 37544
Number of extensions: 349433
Number of successful extensions: 752
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)