Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_I02
         (780 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0582 - 4318837-4318967,4319219-4319399,4319504-4319701,431...   136   2e-32
07_03_1272 - 25360180-25360286,25360454-25360658,25360748-253609...   132   2e-31
11_06_0458 + 23808402-23808469,23808800-23809684,23810011-238119...    29   5.5  
04_04_0518 - 25858336-25859537,25859919-25860749,25861640-25861727     28   7.2  
01_06_0902 + 32853708-32853739,32854787-32855596,32856094-328561...    28   7.2  
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308...    28   7.2  
01_06_0575 - 30357556-30357582,30357698-30357944,30358039-303581...    28   9.6  

>03_01_0582 -
           4318837-4318967,4319219-4319399,4319504-4319701,
           4319791-4320053,4320453-4320597
          Length = 305

 Score =  136 bits (328), Expect = 2e-32
 Identities = 65/109 (59%), Positives = 80/109 (73%)
 Frame = +1

Query: 52  ISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWE 231
           ++A   G    L+  E+DV  MLAA  HLG +N +FQME YVYKRR+DG ++INL +TWE
Sbjct: 1   MAAVAGGAARALSQAEQDVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIYIINLGKTWE 60

Query: 232 KLVLAARAVVAIENPADVFVISSRXFGQRAVLKFAAHTGATPIAGRFPP 378
           KL LAAR +VAIENP D+ V S+R +GQRAVLKFA +TGA  IAGR  P
Sbjct: 61  KLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTP 109


>07_03_1272 -
           25360180-25360286,25360454-25360658,25360748-25360945,
           25361034-25361296,25361865-25362009
          Length = 305

 Score =  132 bits (320), Expect = 2e-31
 Identities = 62/98 (63%), Positives = 75/98 (76%)
 Frame = +1

Query: 85  LALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVA 264
           L+  E+D+  MLAA  HLG +N +FQME YVYKRR DG ++INL +TWEKL LAAR +VA
Sbjct: 12  LSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVIVA 71

Query: 265 IENPADVFVISSRXFGQRAVLKFAAHTGATPIAGRFPP 378
           IENP D+ V S+R +GQRAVLKFA +TGA  IAGR  P
Sbjct: 72  IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTP 109


>11_06_0458 + 23808402-23808469,23808800-23809684,23810011-23811961,
            23812210-23812285,23813064-23813072,23813243-23813335,
            23813578-23813581,23813780-23814703,23814926-23815909,
            23816073-23816118,23816376-23816951,23817253-23817798,
            23817820-23818416
          Length = 2252

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -2

Query: 152  TFSAPRWVVAASILVTSSSLRASTSNP 72
            TF A RWV+AA   V  + L AS S+P
Sbjct: 2100 TFHAHRWVLAARSPVLKAKLSASPSSP 2126


>04_04_0518 - 25858336-25859537,25859919-25860749,25861640-25861727
          Length = 706

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 17/63 (26%), Positives = 30/63 (47%)
 Frame = +3

Query: 162 DGDLCLQTTC*WYPCDQLASYLGKTCSGCSCCRSHREPR*CVRHLITXLRSACCTEVCRA 341
           DG    Q+ C +  C  L+  +  +CSG  CC++   PR    + +T  +    +++ R 
Sbjct: 153 DGGTGYQSGC-FSQCRDLSGLVDGSCSGMGCCQT-TIPRGMYYYNVTFDKRFNTSQISRF 210

Query: 342 HRC 350
            RC
Sbjct: 211 GRC 213


>01_06_0902 +
           32853708-32853739,32854787-32855596,32856094-32856157,
           32856375-32856446
          Length = 325

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = +3

Query: 159 PDGDLCLQTTC*WYPCDQLASYLGKTCSGCSCCRSH 266
           P   +C+ T C    C        K CS CSC + H
Sbjct: 265 PQNSVCMVTLCTSEICSGRRYAAKKLCSACSCHKRH 300


>01_01_0409 -
           3084821-3084988,3085069-3085155,3085270-3085476,
           3085904-3085985,3086085-3086275,3086410-3086616,
           3086709-3086871,3087905-3087960,3088035-3088148,
           3088599-3089807
          Length = 827

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 22/78 (28%), Positives = 27/78 (34%)
 Frame = +3

Query: 105 CHQNACCNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASYLGKTCSGCSCCRSHREPR*C 284
           CH   C   P  GR+   P G     +      CD  A+  G TC     C  H+ P  C
Sbjct: 324 CHAGKCGGCPLQGRRT-CPCGKKDYPSL----DCDAEAATCGSTCEKVLGCGRHKCPERC 378

Query: 285 VRHLITXLRSACCTEVCR 338
            R           T+ CR
Sbjct: 379 HRGSCVETCRLVITKSCR 396


>01_06_0575 -
           30357556-30357582,30357698-30357944,30358039-30358161,
           30358275-30358301,30358475-30358633,30359764-30359948,
           30360225-30360293,30360432-30362354,30363018-30363339,
           30363506-30363543
          Length = 1039

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 195 WYPCDQLASYLGKTCSGCSCCRSHREP 275
           ++PC      +GKT S C   + HR P
Sbjct: 615 YHPCQPTVRLMGKTVSVCERSKEHRVP 641


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,701,833
Number of Sequences: 37544
Number of extensions: 333551
Number of successful extensions: 660
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)