Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_I02
         (780 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical pr...   151   7e-37
U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical pr...    33   0.30 
Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical pr...    32   0.40 
Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical pr...    32   0.40 
U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical pr...    32   0.40 
U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical pr...    32   0.40 
Z81573-2|CAB04626.1|  294|Caenorhabditis elegans Hypothetical pr...    28   8.6  

>Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical
           protein B0393.1 protein.
          Length = 276

 Score =  151 bits (365), Expect = 7e-37
 Identities = 69/105 (65%), Positives = 85/105 (80%)
 Frame = +1

Query: 64  MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVL 243
           MSGG    AL EEDV K+LA   HLG+ N+NFQM+ YVYKRR DG ++IN+++TWEKL+L
Sbjct: 1   MSGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLL 60

Query: 244 AARAVVAIENPADVFVISSRXFGQRAVLKFAAHTGATPIAGRFPP 378
           AARA+ A+ENPADV V+S+R + QRA+LKFAAHTGAT I GRF P
Sbjct: 61  AARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSP 105


>U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical
           protein C27A2.5 protein.
          Length = 188

 Score = 32.7 bits (71), Expect = 0.30
 Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
 Frame = +3

Query: 243 GCSCCRSHREPR*CVRHLITXLRSACCTEVCRAHR-CYXYC 362
           GC CC    +   C R   T  R+ CCT  C   R C   C
Sbjct: 82  GCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGC 122


>Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical
           protein R13H4.8 protein.
          Length = 212

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
 Frame = +3

Query: 243 GCSCCRSHREPR*CVRHLITXLRSACCTEVCRAHR-CYXYC 362
           GC CC        C R   T  R+ CCT  C   R C   C
Sbjct: 83  GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGC 123


>Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical
           protein T01B7.8 protein.
          Length = 164

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
 Frame = +3

Query: 243 GCSCCRSHREPR*CVRHLITXLRSACCTEVCRAHR-CYXYC 362
           GC CC        C R   T  R+ CCT  C   R C   C
Sbjct: 81  GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGC 121


>U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical
           protein C04G6.10 protein.
          Length = 166

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
 Frame = +3

Query: 243 GCSCCRSHREPR*CVRHLITXLRSACCTEVCRAHR-CYXYC 362
           GC CC        C R   T  R+ CCT  C   R C   C
Sbjct: 82  GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGC 122


>U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical
           protein C04G6.7 protein.
          Length = 197

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
 Frame = +3

Query: 243 GCSCCRSHREPR*CVRHLITXLRSACCTEVCRAHR-CYXYC 362
           GC CC        C R   T  R+ CCT  C   R C   C
Sbjct: 83  GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGC 123


>Z81573-2|CAB04626.1|  294|Caenorhabditis elegans Hypothetical
           protein M02G9.3 protein.
          Length = 294

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +3

Query: 240 SGCSCCRSHREPR*CVRHLITXLRSACCTEVCRAHRCYXYC 362
           S  SCC S      C+   +   +S+C T +C+  +C   C
Sbjct: 38  SSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQ-QQCSNQC 77


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,718,631
Number of Sequences: 27780
Number of extensions: 257949
Number of successful extensions: 488
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)