Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_I01
         (815 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1747 + 29188568-29188715,29188793-29189541                       31   1.1  
08_02_1291 + 25930056-25930067,25930289-25930334,25930434-259305...    29   3.3  
01_03_0098 + 12538501-12538527,12538930-12539355,12539470-12539892     29   4.4  
07_03_0809 - 21669632-21669637,21669871-21670131,21670573-216707...    28   7.7  

>07_03_1747 + 29188568-29188715,29188793-29189541
          Length = 298

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = +1

Query: 400 PPPGTTLSAPVYLITAPSPX*SAWTLALQFLCS*TIGPTTCXLARSSXVP 549
           PPP TT++  V L TA +   S   +  QF+C+     TTC  + S  +P
Sbjct: 213 PPPTTTMAQHVVLPTAAA---SCHQMQDQFVCARAAETTTCCWSESESLP 259


>08_02_1291 +
           25930056-25930067,25930289-25930334,25930434-25930546,
           25930645-25930930,25931357-25931421,25931642-25931693,
           25931774-25931883,25932611-25932641,25932853-25933004,
           25934622-25934840
          Length = 361

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 259 HGGLGLTNVSMSQMQGQVDYDFGVGGRLPI 170
           +GG  L    ++Q  G   Y +G GGRLP+
Sbjct: 100 YGGPALPRYGIAQFPGGSGYPYGYGGRLPM 129


>01_03_0098 + 12538501-12538527,12538930-12539355,12539470-12539892
          Length = 291

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 19/65 (29%), Positives = 31/65 (47%)
 Frame = +3

Query: 312 TQGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYXLRARVSNNGSVSXIKRLDISTPIS 491
           T G   CS++L    R+W     +++   +      LRA   +N S +    +D+STP +
Sbjct: 131 TVGRSFCSSFLA---RIWNNTTPIVDTGLSPGYAALLRALCPSNASATATTAIDVSTPAT 187

Query: 492 MQLDN 506
             LDN
Sbjct: 188 --LDN 190


>07_03_0809 -
           21669632-21669637,21669871-21670131,21670573-21670752,
           21671458-21672819
          Length = 602

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +2

Query: 131 SLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMN 286
           +L   +D L+  YD+  PPDS+ V        HA      + +R+L  + +N
Sbjct: 160 NLWTQVDILILRYDK--PPDSRFVQEALAAHAHATEGSETTAIRLLEVISLN 209


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,790,413
Number of Sequences: 37544
Number of extensions: 381383
Number of successful extensions: 943
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2232933960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)