Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_I01
(815 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 39 0.004
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 39 0.005
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 39 0.005
U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated io... 39 0.005
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 39 0.005
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 39 0.005
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 39 0.005
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 39 0.005
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 36 0.026
U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine re... 36 0.035
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 36 0.046
Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical pr... 36 0.046
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 35 0.080
Z70270-2|CAA94228.1| 445|Caenorhabditis elegans Hypothetical pr... 34 0.14
U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine r... 34 0.14
U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine r... 34 0.14
AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine... 34 0.14
AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical ... 34 0.14
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 33 0.18
U64843-16|AAX55689.1| 442|Caenorhabditis elegans Modulation of ... 33 0.18
U64843-15|AAF98227.2| 489|Caenorhabditis elegans Modulation of ... 33 0.18
U64843-14|AAM45353.1| 475|Caenorhabditis elegans Modulation of ... 33 0.18
AF303088-1|AAG36975.1| 489|Caenorhabditis elegans serotonin-gat... 33 0.18
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 33 0.18
AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated... 33 0.24
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 33 0.24
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 32 0.43
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 32 0.43
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 32 0.43
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 32 0.43
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 32 0.43
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 32 0.43
AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical ... 32 0.43
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 32 0.43
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 32 0.56
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 32 0.56
AL132862-1|CAB60529.2| 434|Caenorhabditis elegans Hypothetical ... 32 0.56
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 31 0.75
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 31 0.75
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 31 0.75
Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical pr... 31 0.99
U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine r... 31 0.99
AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine... 31 0.99
AF047656-8|AAC05109.2| 340|Caenorhabditis elegans Ligand-gated ... 31 0.99
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 31 1.3
AF022985-15|AAB69969.2| 435|Caenorhabditis elegans Hypothetical... 31 1.3
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 30 1.7
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 30 2.3
AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ... 29 4.0
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 29 5.3
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 29 5.3
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 29 5.3
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 29 5.3
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 29 5.3
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 29 5.3
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 29 5.3
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 29 5.3
AC006618-5|ABB88234.1| 513|Caenorhabditis elegans Gaba/glycine ... 29 5.3
AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine ... 29 5.3
Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 28 9.2
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 28 9.2
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 28 9.2
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 28 9.2
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 28 9.2
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 28 9.2
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 28 9.2
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 28 9.2
AF040661-8|AAG24222.1| 327|Caenorhabditis elegans Hypothetical ... 28 9.2
AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical ... 28 9.2
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +3
Query: 339 WL-VSSERLWRPDVVLLNAA-ATTAGDYXLR-ARVSNNGSVSXIKRLDISTPISMQLDNW 509
W+ +S+ R W PDV+ N D ++ A + NG + + +S+P +++DN+
Sbjct: 100 WIKISASRAWIPDVIFTNGIDMDPLLDKDMQMADLRYNGEIRTSRPAVVSSPCPLEIDNF 159
Query: 510 PNDLXTCXFXXGS 548
P D+ C GS
Sbjct: 160 PYDVQKCNISMGS 172
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 143 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 319
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 320 XMG 328
G
Sbjct: 130 LFG 132
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 143 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 319
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 320 XMG 328
G
Sbjct: 130 LFG 132
>U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated ion
channel protein 3 protein.
Length = 355
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +2
Query: 89 TCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRI 265
T +A +E +S S + LL +++ SPPD ++ ++ + L H I E +++
Sbjct: 56 TVGVAEFSEQYQGSS-SRLTRHLLEKHNKCSPPDGRVDISHNIELVHIIGINELNQNMQV 114
Query: 266 LADLQMNWIDKRLSWNAGXM-GLQH 337
L + W D LSW G++H
Sbjct: 115 LVYIVQQWTDASLSWKVEEFRGIKH 139
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 143 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 319
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 320 XMG 328
G
Sbjct: 130 LFG 132
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 143 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 319
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 320 XMG 328
G
Sbjct: 130 LFG 132
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 143 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 319
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 320 XMG 328
G
Sbjct: 130 LFG 132
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 143 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 319
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 320 XMG 328
G
Sbjct: 130 LFG 132
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 36.3 bits (80), Expect = 0.026
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +2
Query: 167 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 316
YD E+P + L +L+ ++E + + ++ ++ W D RLSWNA
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNA 112
>U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 3 protein.
Length = 438
Score = 35.9 bits (79), Expect = 0.035
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +3
Query: 351 SERLWRPDVVLLNAAAT---TAGDYXLRARVSNNGSVSXIKRLDISTPISMQLDNWPNDL 521
SERLW P+V +N+ +T + + + NG+V R+ +S P S +L +P D
Sbjct: 112 SERLWTPNVCFVNSKSTQVHKSPASNILLIIYPNGTVWLNYRVQVSAPCSFELSRFPIDA 171
Query: 522 XTC 530
C
Sbjct: 172 QEC 174
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 35.5 bits (78), Expect = 0.046
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Frame = +2
Query: 146 IDSLLATYDRESP----PDSKIVVNLTL---HLRHANIRESESTVRILADLQMNWIDKRL 304
+ + A +D P PD+ N TL +L+ + E E V ++ +L W D RL
Sbjct: 50 VSPVYAWFDTSKPLGYDPDAPQRYNYTLFLYNLKLIQVNEPEEQVSVVLELMEYWYDPRL 109
Query: 305 SWNA 316
SWNA
Sbjct: 110 SWNA 113
>Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical
protein T05C12.2 protein.
Length = 500
Score = 35.5 bits (78), Expect = 0.046
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 348 SSERLWRPDVVLLNAAATT-AGDYXLRARVSNNGSVSXIKRLDISTPISMQLDNWPNDLX 524
+S +LWRPDV+L N+ + + Y R VS+NG V + + +P D
Sbjct: 103 ASFKLWRPDVLLFNSVSESFDSTYSSRFIVSSNGDVQQNPPGIFRFVCQIDVTYYPFDKQ 162
Query: 525 TCXFXXGS 548
TC GS
Sbjct: 163 TCFLKLGS 170
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 34.7 bits (76), Expect = 0.080
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 321 EWGCSTWLVSSERLWRPDVVLLNAAATT-AGDYXLRARVSN-NGSVSXIKRLDISTPISM 494
+WG S ++W P++V +N +T+ G + +N G + +TP
Sbjct: 126 QWGLSWLNFYWIQIWTPNIVQINGGSTSNPGQVTSKVLAANYTGQIYLWSDFSFTTPFRF 185
Query: 495 QLDNWPNDL 521
Q +++PND+
Sbjct: 186 QYEDYPNDM 194
Score = 31.9 bits (69), Expect = 0.56
Identities = 16/79 (20%), Positives = 32/79 (40%)
Frame = +2
Query: 104 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQM 283
S C+ + + TY + +K+V ++ + + I E V++ +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 284 NWIDKRLSWNAGXMGLQHL 340
+W D +SW+ GL L
Sbjct: 114 SWNDTMVSWDKEQWGLSWL 132
>Z70270-2|CAA94228.1| 445|Caenorhabditis elegans Hypothetical
protein C53D6.3 protein.
Length = 445
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +3
Query: 354 ERLWRPDVVLLNAAATTAGDYXLRA---RVSNNGSVSXIKRLDISTPISMQLDNWPNDLX 524
+RLW P+ +N+ + R+ + NG+V R+ + P S+ L N+P DL
Sbjct: 130 DRLWTPNSCFINSKVAQIHNSPFRSVFLMLFPNGTVMVNYRVRVKGPCSLDLSNFPLDLQ 189
Query: 525 TC 530
C
Sbjct: 190 KC 191
>U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform a protein.
Length = 446
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/70 (21%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAAATTAGDYXLR--ARVSNNGSVSXIKRLDISTPISMQLDNWPND 518
V SE +W+PD+++ N A + ++ ++ + G +S + + +Q++ +P D
Sbjct: 101 VPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKISLFRAIITDITCDLQMEKFPYD 160
Query: 519 LXTCXFXXGS 548
C S
Sbjct: 161 QQICFIMLAS 170
>U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform b protein.
Length = 515
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/70 (21%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAAATTAGDYXLR--ARVSNNGSVSXIKRLDISTPISMQLDNWPND 518
V SE +W+PD+++ N A + ++ ++ + G +S + + +Q++ +P D
Sbjct: 101 VPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKISLFRAIITDITCDLQMEKFPYD 160
Query: 519 LXTCXFXXGS 548
C S
Sbjct: 161 QQICFIMLAS 170
>AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine
receptor, nicotinic,alpha 9 like (58.1 kD) alternative
variant a protein.
Length = 499
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/70 (21%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAAATTAGDYXLR--ARVSNNGSVSXIKRLDISTPISMQLDNWPND 518
V SE +W+PD+++ N A + ++ ++ + G +S + + +Q++ +P D
Sbjct: 85 VPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKISLFRAIITDITCDLQMEKFPYD 144
Query: 519 LXTCXFXXGS 548
C S
Sbjct: 145 QQICFIMLAS 154
>AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical
protein Y48B6A.4 protein.
Length = 474
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +3
Query: 321 EWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYXLRARVSNNGSVSXIKRLDISTPISM 494
E+G T L + LW+PD++L N+A + + VS+NG V +S S+
Sbjct: 92 EYGNITTLQIPHGTLWKPDILLFNSANEHFDASFPVHMVVSSNGDVLFAPPGIVSFSCSL 151
Query: 495 QLDNWPNDLXTCXFXXGS 548
+ +P D C GS
Sbjct: 152 SMTWFPYDQQVCYLKFGS 169
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 209 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 316
L +L+ ++E E V ++ +L W D RLSWN+
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNS 114
>U64843-16|AAX55689.1| 442|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform c protein.
Length = 442
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +3
Query: 357 RLWRPDVVLLNAAATT---AGDYXLRARVSNNGSVSXIKRLDISTPISMQLDNWPNDLXT 527
++W P+ ++N+ TT + + + NG+V RL + +P ++ L +P D T
Sbjct: 113 KIWSPNTCMINSKRTTVHASPSENVMVILYENGTVWINHRLSVKSPCNLDLRQFPFDTQT 172
Query: 528 C 530
C
Sbjct: 173 C 173
>U64843-15|AAF98227.2| 489|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform a protein.
Length = 489
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +3
Query: 357 RLWRPDVVLLNAAATT---AGDYXLRARVSNNGSVSXIKRLDISTPISMQLDNWPNDLXT 527
++W P+ ++N+ TT + + + NG+V RL + +P ++ L +P D T
Sbjct: 113 KIWSPNTCMINSKRTTVHASPSENVMVILYENGTVWINHRLSVKSPCNLDLRQFPFDTQT 172
Query: 528 C 530
C
Sbjct: 173 C 173
>U64843-14|AAM45353.1| 475|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform b protein.
Length = 475
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +3
Query: 357 RLWRPDVVLLNAAATT---AGDYXLRARVSNNGSVSXIKRLDISTPISMQLDNWPNDLXT 527
++W P+ ++N+ TT + + + NG+V RL + +P ++ L +P D T
Sbjct: 113 KIWSPNTCMINSKRTTVHASPSENVMVILYENGTVWINHRLSVKSPCNLDLRQFPFDTQT 172
Query: 528 C 530
C
Sbjct: 173 C 173
>AF303088-1|AAG36975.1| 489|Caenorhabditis elegans serotonin-gated
chloride channel protein.
Length = 489
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +3
Query: 357 RLWRPDVVLLNAAATT---AGDYXLRARVSNNGSVSXIKRLDISTPISMQLDNWPNDLXT 527
++W P+ ++N+ TT + + + NG+V RL + +P ++ L +P D T
Sbjct: 113 KIWSPNTCMINSKRTTVHASPSENVMVILYENGTVWINHRLSVKSPCNLDLRQFPFDTQT 172
Query: 528 C 530
C
Sbjct: 173 C 173
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 33.5 bits (73), Expect = 0.18
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Frame = +2
Query: 143 MIDSLLATYDRESPP--DSK--IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 307
+I+ L++ Y RE P DS +VV+L + L+ N+ E E + + A L+ W D+ L
Sbjct: 25 LINDLMSGYVREERPTLDSSKPVVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLR 84
Query: 308 W 310
W
Sbjct: 85 W 85
>AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated
ion channel protein 10 protein.
Length = 493
Score = 33.1 bits (72), Expect = 0.24
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Frame = +2
Query: 107 AAECENATSL----SLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA-NIRESESTVRI 265
A CEN +L S +++ + YDR P ++VN+T+ L ++E++
Sbjct: 57 ALNCENFRTLDNETSAILNDIFVGYDRRVLPFVQGPVLVNMTIVLGILIELKENQQLAAY 116
Query: 266 LADLQMNWIDKRLSWN 313
+ W D RLSW+
Sbjct: 117 VISHTQRWYDGRLSWD 132
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 33.1 bits (72), Expect = 0.24
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 182 PPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGXM-GLQHL 340
PP +I + L++ ++ + E E L D + +W D RLSW+ G+ H+
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYGGINHI 131
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 32.3 bits (70), Expect = 0.43
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +2
Query: 143 MIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 307
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 308 WN 313
W+
Sbjct: 90 WD 91
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 32.3 bits (70), Expect = 0.43
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +2
Query: 143 MIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 307
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 308 WN 313
W+
Sbjct: 90 WD 91
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 32.3 bits (70), Expect = 0.43
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +2
Query: 143 MIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 307
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 308 WN 313
W+
Sbjct: 90 WD 91
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 32.3 bits (70), Expect = 0.43
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2
Query: 200 VVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 313
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 32.3 bits (70), Expect = 0.43
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2
Query: 200 VVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 313
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 32.3 bits (70), Expect = 0.43
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = +3
Query: 327 GCSTWLVSSERLWRPDVVLLNAAATTAGDYXL----RARVSNNGSVSXIKRLDISTPISM 494
G V S+ +W PDVVL N A G+Y + +A+++ NG+V + +
Sbjct: 97 GVEVLYVPSDTIWLPDVVLYNNA---DGNYQVTIMTKAKLTYNGTVEWAPPAIYKSMCQI 153
Query: 495 QLDNWPNDLXTCXFXXGS 548
++ +P D C GS
Sbjct: 154 DVEFFPFDRQQCEMKFGS 171
>AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical
protein Y58G8A.1 protein.
Length = 486
Score = 32.3 bits (70), Expect = 0.43
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Frame = +3
Query: 333 STWLVSSERLWRPDVVLLNAAATTAGDYXLR---ARVSNNGSVSXIKRLDISTPISMQLD 503
ST ++S +LW+P + L N+A + L A V N G V
Sbjct: 98 STLSIASSKLWQPALQLYNSARGNSWSLYLTGLPAIVYNTGKVWSRGTFSFFVTCQFDFT 157
Query: 504 NWPNDLXTC 530
NWP D +C
Sbjct: 158 NWPYDQQSC 166
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 32.3 bits (70), Expect = 0.43
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = +3
Query: 327 GCSTWLVSSERLWRPDVVLLNAAATTAGDYXL----RARVSNNGSVSXIKRLDISTPISM 494
G V S+ +W PDVVL N A G+Y + +A+++ NG+V + +
Sbjct: 97 GVEVLYVPSDTIWLPDVVLYNNA---DGNYQVTIMTKAKLTYNGTVEWAPPAIYKSMCQI 153
Query: 495 QLDNWPNDLXTCXFXXGS 548
++ +P D C GS
Sbjct: 154 DVEFFPFDRQQCEMKFGS 171
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 31.9 bits (69), Expect = 0.56
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +3
Query: 321 EW-GCSTWLVSSERLWRPDVVLLNAAATT--AGDYXLRARVSNNGSVSXIKRLDISTPIS 491
EW G ++ ++W PD + N T ++ R R V K +D++ P+S
Sbjct: 103 EWNGIERIIIPKSQIWIPDGYIFNTVEETEPLENHNARVRYDGRVEVDFNKLVDLTCPMS 162
Query: 492 MQLDNWPNDLXTCXFXXGS 548
+ ++P D+ C GS
Sbjct: 163 VL--SFPFDVQLCALQFGS 179
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 31.9 bits (69), Expect = 0.56
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +3
Query: 321 EW-GCSTWLVSSERLWRPDVVLLNAAATT--AGDYXLRARVSNNGSVSXIKRLDISTPIS 491
EW G ++ ++W PD + N T ++ R R V K +D++ P+S
Sbjct: 103 EWNGIERIIIPKSQIWIPDGYIFNTVEETEPLENHNARVRYDGRVEVDFNKLVDLTCPMS 162
Query: 492 MQLDNWPNDLXTCXFXXGS 548
+ ++P D+ C GS
Sbjct: 163 VL--SFPFDVQLCALQFGS 179
>AL132862-1|CAB60529.2| 434|Caenorhabditis elegans Hypothetical
protein Y73F8A.2 protein.
Length = 434
Score = 31.9 bits (69), Expect = 0.56
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +3
Query: 357 RLWRPDVVLLNAAATTAGDY---XLRARVSNNGSVSXIKRLDISTPISMQLDNWPNDLXT 527
+LW P+V ++N+ +T D + + NG++ R+ P M L N+P D
Sbjct: 135 KLWSPNVCIVNSKSTKVHDSPKPNILLMIFPNGTIWLNYRIRSEAPCQMNLRNFPLDSIR 194
Query: 528 C 530
C
Sbjct: 195 C 195
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 31.5 bits (68), Expect = 0.75
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 345 VSSERLWRPDVVLL-NAAATTAGDYXLRARVSNNGSVSXIKRLDISTPISMQLDNWPNDL 521
V S+R+W PD+VL NA + V ++G V+ + + + ++ +P D
Sbjct: 137 VPSDRVWLPDIVLFNNADGNYEVSFKSNVFVDHHGDVTWVPPAMFKSSCRIDVEWFPFDE 196
Query: 522 XTCXFXXGS 548
C GS
Sbjct: 197 QCCTLVFGS 205
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 31.5 bits (68), Expect = 0.75
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 345 VSSERLWRPDVVLL-NAAATTAGDYXLRARVSNNGSVSXIKRLDISTPISMQLDNWPNDL 521
V S+R+W PD+VL NA + V ++G V+ + + + ++ +P D
Sbjct: 137 VPSDRVWLPDIVLFNNADGNYEVSFKSNVFVDHHGDVTWVPPAMFKSSCRIDVEWFPFDE 196
Query: 522 XTCXFXXGS 548
C GS
Sbjct: 197 QCCTLVFGS 205
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 31.5 bits (68), Expect = 0.75
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 182 PPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 313
PP +++ + + + L+ ++ E E V L D W D+RL WN
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWN 93
>Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical
protein F28F8.1 protein.
Length = 510
Score = 31.1 bits (67), Expect = 0.99
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAAATTA--GDYXLRARVSNNGSVSXIKRLDISTPISMQLDNWPND 518
V + ++W+PDV++ N A + A V N G V + + ++ L +P D
Sbjct: 106 VPAHKIWKPDVLVYNNANMNVEENEMETNAIVDNTGRVMLFRSMITDISCNLNLQQFPFD 165
Query: 519 LXTC 530
C
Sbjct: 166 QQIC 169
>U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine
receptor protein 10 protein.
Length = 510
Score = 31.1 bits (67), Expect = 0.99
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +3
Query: 357 RLWRPDVVLLNAAATT-AGDYXLRARVSNNGSVSXIKRLDISTPISMQLDNWPNDLXTCX 533
++WRPD++L N+A+ + V N G V+ I M + +P D C
Sbjct: 48 QIWRPDILLYNSASEDFDSSFKSNEVVYNTGEVNWIPPGIFRASCKMDITYFPFDDQVCY 107
Query: 534 FXXGS 548
GS
Sbjct: 108 LKFGS 112
>AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine
receptor, one ofnine alpha a7-like nicotinic
acetylcholine receptor subunits(58.6 kD) (acr-18)
protein.
Length = 510
Score = 31.1 bits (67), Expect = 0.99
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAAATTA--GDYXLRARVSNNGSVSXIKRLDISTPISMQLDNWPND 518
V + ++W+PDV++ N A + A V N G V + + ++ L +P D
Sbjct: 106 VPAHKIWKPDVLVYNNANMNVEENEMETNAIVDNTGRVMLFRSMITDISCNLNLQQFPFD 165
Query: 519 LXTC 530
C
Sbjct: 166 QQIC 169
>AF047656-8|AAC05109.2| 340|Caenorhabditis elegans Ligand-gated ion
channel protein 5 protein.
Length = 340
Score = 31.1 bits (67), Expect = 0.99
Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +3
Query: 339 WL-VSSERLWRPDVVLLNAAATTA--GDYXLRARVSNNGSVSXIKRLDISTPISMQLDNW 509
W+ +S R+W PDV+ + + + A + NG + +ST + + ++
Sbjct: 100 WIKISVSRVWVPDVIFTKRLSVESLLDEDMQMADLRYNGEIRTSLPAVVSTSCPLNIQDF 159
Query: 510 PNDLXTCXFXXGS 548
P+D+ C GS
Sbjct: 160 PHDVQECNISMGS 172
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 209 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 313
L +L+ ++E V ++ +L W D RLSWN
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWN 113
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +2
Query: 167 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 316
YD ++P + L L+ + E V ++ ++ W D RLSWNA
Sbjct: 64 YDPDAPKRYNYSIML-YSLKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNA 112
>AF022985-15|AAB69969.2| 435|Caenorhabditis elegans Hypothetical
protein T15B7.16 protein.
Length = 435
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +3
Query: 354 ERLWRPDVVLLNAAAT---TAGDYXLRARVSNNGSVSXIKRLDISTPISMQLDNWPNDLX 524
E+LW P+V +N+ T ++ + + NG+V RL + +P + L +P D+
Sbjct: 113 EKLWTPNVCFVNSKKTEIHSSPTPNIFLMIYPNGTVWVNYRLQVQSPCMVDLVLFPMDIM 172
Query: 525 TC 530
C
Sbjct: 173 NC 174
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +3
Query: 354 ERLWRPDVVLLNAAATTAGDYXLRAR---VSNNGSVSXIKRLDISTPISMQLDNWPNDLX 524
+++W PD ++N+ +++ + NG V RL++ TP S+ L +P D
Sbjct: 95 KKIWTPDTCIINSKSSSIHSSPSENTFVILYENGLVWSNFRLNVKTPCSVNLKMFPFDSL 154
Query: 525 TC 530
+C
Sbjct: 155 SC 156
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +2
Query: 113 ECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE-SESTVRILADLQMN- 286
E + +L +ID+LL YD P+++ VN+T+ L + SE T D+ +
Sbjct: 9 EFNSRINLGKLIDTLLTDYDTHLLPEAE-GVNVTIELHVQGVSGISEITGDFSLDVMYSE 67
Query: 287 -WIDKRLSW 310
W D RLS+
Sbjct: 68 IWQDPRLSF 76
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +2
Query: 233 NIRESESTVRILADLQMNWIDKRLSWNA---GXMGLQHLAG 346
++ E + + + L +W+D RLSWN G + L H G
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPG 84
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +3
Query: 354 ERLWRPDVVLL-NAAATTAGDYXLRARVSNNGSVSXIKRLDISTPISMQLDNWPNDLXTC 530
E LW PD++L NA + + VS G V+ + ++ ++ +P DL C
Sbjct: 85 EMLWLPDIILYNNAHGSPWVSETTQVHVSFEGRVTWQPPVVYDAFCNIDIEWYPYDLQIC 144
Query: 531 XFXXGS 548
GS
Sbjct: 145 ELKFGS 150
>AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ion
channel protein 12 protein.
Length = 425
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = +3
Query: 321 EW-GCSTWLVSSERLWRPDVVLLNAA--ATTAGDYXLRARVSNNGSVSXIKRLDISTPIS 491
EW G + +W PD + N T ++ +R + V K +D+ P+S
Sbjct: 96 EWDGIEKITIPKSMVWLPDGYIFNTVEETDTLDNHNVRVHYNGKVEVDFNKLIDLICPMS 155
Query: 492 MQLDNWPNDLXTCXFXXGS 548
+ ++P D+ C GS
Sbjct: 156 VL--SFPFDVQLCALQFGS 172
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +3
Query: 360 LWRPDVVLLNAA-ATTAGDYXLRARVSNNGSVSXIKRLDISTPISMQLDNWPNDLXTCXF 536
+W+PDV+L N+ + + A V G+V+ I I + ++ + +P D C
Sbjct: 106 IWKPDVLLYNSVDQQFDSTWPVNAVVLYTGNVTWIPPAIIRSSCAIDIAYFPFDTQHCTM 165
Query: 537 XXGS 548
GS
Sbjct: 166 KFGS 169
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +2
Query: 119 ENATSLS-LMIDSLLATYDRESPPDSKIVVNLT-LHLRHANIRESESTVRILADLQMNWI 292
E+A L+ L I +A+ + +N L+H + E + I L+++W
Sbjct: 33 ESAKKLAKLNIPHAIASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWH 92
Query: 293 DKRLSWN 313
D RL WN
Sbjct: 93 DDRLMWN 99
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = +2
Query: 134 LSLMIDSLLATYDRESPP----DSKIVVNLTLHL-RHANIRESESTVRILADLQMNWIDK 298
+S ++++LL Y++ P + V +L R ++ E + L+M W DK
Sbjct: 29 VSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDVDEVNQVLTTSLWLEMQWYDK 88
Query: 299 RLSWNAGXMG 328
+L+WN G
Sbjct: 89 KLTWNPTDWG 98
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 357 RLWRPDVVLLNAAATT-AGDYXLRARVSNNGSVSXIKRLDISTPISMQLDNWPNDLXTCX 533
++W+PDV+L N+ T Y V + G V + + + +P D C
Sbjct: 103 KIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQKCF 162
Query: 534 FXXGS 548
F GS
Sbjct: 163 FKFGS 167
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 28.7 bits (61), Expect = 5.3
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 348 SSERLWRPDVVLLNAAA 398
SS+ +W+PDV+L N+AA
Sbjct: 105 SSDHIWKPDVLLYNSAA 121
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +3
Query: 360 LWRPDVVLLNAA-ATTAGDYXLRARVSNNGSVSXIKRLDISTPISMQLDNWPNDLXTCXF 536
+W+PDV+L N+ + + A V G+V+ I I + ++ + +P D C
Sbjct: 106 IWKPDVLLYNSVDQQFDSTWPVNAVVLYTGNVTWIPPAIIRSSCAIDIAYFPFDTQHCTM 165
Query: 537 XXGS 548
GS
Sbjct: 166 KFGS 169
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 357 RLWRPDVVLLNAAATT-AGDYXLRARVSNNGSVSXIKRLDISTPISMQLDNWPNDLXTCX 533
++W+PDV+L N+ T Y V + G V + + + +P D C
Sbjct: 103 KIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQKCF 162
Query: 534 FXXGS 548
F GS
Sbjct: 163 FKFGS 167
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 357 RLWRPDVVLLNAAATT-AGDYXLRARVSNNGSVSXIKRLDISTPISMQLDNWPNDLXTCX 533
++W+PDV+L N+ T Y V + G V + + + +P D C
Sbjct: 103 KIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQKCF 162
Query: 534 FXXGS 548
F GS
Sbjct: 163 FKFGS 167
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 357 RLWRPDVVLLNAAATT-AGDYXLRARVSNNGSVSXIKRLDISTPISMQLDNWPNDLXTCX 533
++W+PDV+L N+ T Y V + G V + + + +P D C
Sbjct: 103 KIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQKCF 162
Query: 534 FXXGS 548
F GS
Sbjct: 163 FKFGS 167
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 28.7 bits (61), Expect = 5.3
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 215 LHLRHAN-IRESESTVRILADLQMNWIDKRLSWN 313
LH+ H + I++ + +++ W+D+RL WN
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWN 95
>AC006618-5|ABB88234.1| 513|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform b protein.
Length = 513
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Frame = +3
Query: 357 RLWRPDVVLLNAAATTAGDYX---LRARVSNNGSVSXIKRLDISTPISMQLDNWPNDLXT 527
++W+PDV NA + + +GS+ R+ + ++ L+ WP D
Sbjct: 110 KMWKPDVYFANARIAEFHEVTQPNFLVWIQPDGSILYDTRISMVVVCTLNLEKWPLDSQR 169
Query: 528 C 530
C
Sbjct: 170 C 170
>AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform a protein.
Length = 546
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Frame = +3
Query: 357 RLWRPDVVLLNAAATTAGDYX---LRARVSNNGSVSXIKRLDISTPISMQLDNWPNDLXT 527
++W+PDV NA + + +GS+ R+ + ++ L+ WP D
Sbjct: 110 KMWKPDVYFANARIAEFHEVTQPNFLVWIQPDGSILYDTRISMVVVCTLNLEKWPLDSQR 169
Query: 528 C 530
C
Sbjct: 170 C 170
>Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical
protein T01H10.7 protein.
Length = 399
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = +2
Query: 167 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGXMG 328
Y+ +P V+L +L+ + E E V ++ ++ W D R++W++ G
Sbjct: 64 YNPLAPKRFNYTVSL-YYLKLVEVIEPEEKVSVVLEMAEYWYDPRIAWDSSLYG 116
>Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.3 protein.
Length = 399
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +2
Query: 209 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 313
L L+ + E + V ++ ++ W D RL+WN
Sbjct: 78 LLFSLKLVEVTEPQEKVSVVMEVMEYWFDARLTWN 112
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 203 VNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWNA 316
VN+ L + H + E E T + + WID+ + W+A
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDA 92
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +3
Query: 345 VSSERLWRPDVVLL-NAAATTAGDYXLRARVSNNGSVSXIKRLDISTPISMQLDNWPNDL 521
V+ E++W PD+VL NA + + + G+V + + + ++ +P D
Sbjct: 115 VAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWVPPAIYKSSCIIDVEFFPFDD 174
Query: 522 XTCXFXXGS 548
C GS
Sbjct: 175 QLCSLTFGS 183
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +3
Query: 345 VSSERLWRPDVVLL-NAAATTAGDYXLRARVSNNGSVSXIKRLDISTPISMQLDNWPNDL 521
VS +++W PD+VL NA + +++ G + + + + ++ +P D
Sbjct: 107 VSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDVEFFPFDE 166
Query: 522 XTCXFXXGS 548
C GS
Sbjct: 167 QVCTLVFGS 175
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 348 SSERLWRPDVVLLNAA-ATTAGDYXLRARVSNNGSVSXIKRLDISTPISMQLDNWPNDLX 524
++ +W+PDV+L N+A Y + VS G V + + + + +P D
Sbjct: 107 NANAIWKPDVLLYNSADENFDSTYPVNYVVSYTGDVLQVPPGILKLSCKIDITYFPFDDQ 166
Query: 525 TCXFXXGS 548
C GS
Sbjct: 167 ICHLKFGS 174
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +3
Query: 345 VSSERLWRPDVVLL-NAAATTAGDYXLRARVSNNGSVSXIKRLDISTPISMQLDNWPNDL 521
V+ E++W PD+VL NA + + + G+V + + + ++ +P D
Sbjct: 115 VAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWVPPAIYKSSCIIDVEFFPFDD 174
Query: 522 XTCXFXXGS 548
C GS
Sbjct: 175 QLCSLTFGS 183
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +3
Query: 345 VSSERLWRPDVVLL-NAAATTAGDYXLRARVSNNGSVSXIKRLDISTPISMQLDNWPNDL 521
V+ E++W PD+VL NA + + + G+V + + + ++ +P D
Sbjct: 115 VAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWVPPAIYKSSCIIDVEFFPFDD 174
Query: 522 XTCXFXXGS 548
C GS
Sbjct: 175 QLCSLTFGS 183
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +3
Query: 345 VSSERLWRPDVVLL-NAAATTAGDYXLRARVSNNGSVSXIKRLDISTPISMQLDNWPNDL 521
VS +++W PD+VL NA + +++ G + + + + ++ +P D
Sbjct: 107 VSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDVEFFPFDE 166
Query: 522 XTCXFXXGS 548
C GS
Sbjct: 167 QVCTLVFGS 175
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +3
Query: 345 VSSERLWRPDVVLL-NAAATTAGDYXLRARVSNNGSVSXIKRLDISTPISMQLDNWPNDL 521
VS +++W PD+VL NA + +++ G + + + + ++ +P D
Sbjct: 107 VSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDVEFFPFDE 166
Query: 522 XTCXFXXGS 548
C GS
Sbjct: 167 QVCTLVFGS 175
>AF040661-8|AAG24222.1| 327|Caenorhabditis elegans Hypothetical
protein W10G11.16 protein.
Length = 327
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +3
Query: 354 ERLWRPDVVLLNAAATTAGD---YXLRARVSNNGSVSXIKRLDISTPISMQLDNWPNDLX 524
E++WRPD NA + R+ +G V R+ I ++ L +P+D
Sbjct: 35 EKIWRPDPFFANAKEAEFHEVTFLNFLMRIFPDGLVLYETRVKIKPSCNLILCKYPHDKQ 94
Query: 525 TC 530
TC
Sbjct: 95 TC 96
>AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical
protein C04C3.2 protein.
Length = 464
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = +2
Query: 143 MIDSLLATYDRESPPDSK----IVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLS 307
+I+++ YD+ P ++ ++V++T+ L +RE++ + W D +L+
Sbjct: 44 LIETIQRRYDKRVRPFAESNRPVIVHMTIVLGILTEVRENQQVASFVISHVQKWRDPKLA 103
Query: 308 WN 313
WN
Sbjct: 104 WN 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,719,250
Number of Sequences: 27780
Number of extensions: 272240
Number of successful extensions: 899
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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