Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_H21
(1046 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 51 3e-07
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 46 7e-06
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 39 0.001
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 36 0.007
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 32 0.15
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.20
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 31 0.36
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 0.52
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 5.8
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 5.8
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 5.8
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 5.8
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 7.7
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 7.7
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 50.8 bits (116), Expect = 3e-07
Identities = 24/59 (40%), Positives = 25/59 (42%)
Frame = +1
Query: 415 PPPPPPPXXGXKFFFXXXPPPPPXGGXXFXXPPPPPPPPXXXGGGXXFXXXXXPPPPPP 591
P PPP P G PPPPP G PPPPPPPP GG + P P
Sbjct: 750 PVPPPAPIMGGP-----PPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 50.4 bits (115), Expect = 4e-07
Identities = 26/59 (44%), Positives = 26/59 (44%)
Frame = +1
Query: 415 PPPPPPPXXGXKFFFXXXPPPPPXGGXXFXXPPPPPPPPXXXGGGXXFXXXXXPPPPPP 591
PPPPPP P PPP PPPPPPPP G G PPPPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPP--APIMGGPPPPPPPPGVAGAG-----PPPPPPPPP 783
Score = 42.7 bits (96), Expect = 8e-05
Identities = 20/47 (42%), Positives = 21/47 (44%)
Frame = +2
Query: 419 PPPPPXXXGXNFFFXXXPPPPPGGGXFXXXPPPPPPPPXXXGGXGXF 559
PPP P G PPPPP G PPPPPPPP G +
Sbjct: 752 PPPAPIMGGP------PPPPPPPGVAGAGPPPPPPPPPAVSAGGSRY 792
Score = 39.1 bits (87), Expect = 0.001
Identities = 24/66 (36%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Frame = +1
Query: 448 KFFFXXXPPPPPXGGXXFXXPPP-PPPPPXXXGGGXXFXXXXXPPPPPPXGGXXXXXXXX 624
K PPPPP P P P PPP GG PPPPPP G
Sbjct: 726 KLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGG--------PPPPPPPPGVAGAGPPP 777
Query: 625 XXXPPP 642
PPP
Sbjct: 778 PPPPPP 783
Score = 38.7 bits (86), Expect = 0.001
Identities = 21/58 (36%), Positives = 21/58 (36%)
Frame = +3
Query: 468 PPPPPXGGGXFXXXPPPPPPPXXXGGGXGXXXXXXPPPPPPXGGGXXXXXXXXXPPPP 641
PPP P GG PPPPPP G G PPP GG P P
Sbjct: 752 PPPAPIMGG------PPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 38.3 bits (85), Expect = 0.002
Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +1
Query: 406 GGXPPPPPPPXXGXKFFFXXXPPPPP----XGGXXFXXPPPPPPP 528
GG PPPPPPP G PPPPP GG + P P P
Sbjct: 759 GGPPPPPPPP--GVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Score = 28.7 bits (61), Expect = 1.4
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -2
Query: 553 PXPPPXXXGGGGGGGXXXKXPPPXGGGGG 467
P PPP G G G PPP GG
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 26.2 bits (55), Expect = 7.7
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 601 PPPXGGGGGGXXXXKXPXPPPXXXGGG 521
PPP G G P PPP GG
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPPAVSAGG 789
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 46.4 bits (105), Expect = 7e-06
Identities = 24/61 (39%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = +1
Query: 415 PPPPPPPXXGXKFFFXXXPPPPPXGGXXFXXPPPPPPPPXXXGGGXXF--XXXXXPPPPP 588
PPPPPPP + PP G PPPPPPP G PPPPP
Sbjct: 311 PPPPPPPSRRNR-----GKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Query: 589 P 591
P
Sbjct: 366 P 366
Score = 36.3 bits (80), Expect = 0.007
Identities = 22/64 (34%), Positives = 22/64 (34%), Gaps = 5/64 (7%)
Frame = +1
Query: 415 PPPPPPPXXGXKFFFXXXPPPP--PXG---GXXFXXPPPPPPPPXXXGGGXXFXXXXXPP 579
PPP PPP G PP P P PP PPP PP
Sbjct: 253 PPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPP 312
Query: 580 PPPP 591
PPPP
Sbjct: 313 PPPP 316
Score = 35.5 bits (78), Expect = 0.013
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 8/53 (15%)
Frame = +3
Query: 510 PPPPPPPXXXGG----GXGXXXXXXPPPPPPX----GGGXXXXXXXXXPPPPP 644
PPPPPP G G G PPPPPP G PPPP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPP 364
Score = 34.7 bits (76), Expect = 0.022
Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 8/54 (14%)
Frame = +1
Query: 508 PPPPPPPPXXXGG----GXXFXXXXXPPPPPPX----GGXXXXXXXXXXXPPPP 645
PPPPPPP G G PPPPPP G PPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPP 364
Score = 31.1 bits (67), Expect = 0.27
Identities = 23/84 (27%), Positives = 23/84 (27%), Gaps = 7/84 (8%)
Frame = +1
Query: 415 PPPPP------PPXXGXKFFFXXXPPPPPXGGXXFXXPPPPPPPP-XXXGGGXXFXXXXX 573
PP PP PP PP PP PP PP P
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSK 289
Query: 574 PPPPPPXGGXXXXXXXXXXXPPPP 645
PP PPP PPP
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPP 313
Score = 30.3 bits (65), Expect = 0.47
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +1
Query: 406 GGXPPPPPPPXXGXKFFFXXXPPPPPXGGXXFXXPPPPPPP 528
G PPPPPP PPP PP PPP
Sbjct: 357 GRSAPPPPPPRSAPS----TGRQPPPLSSSRAVSNPPAPPP 393
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 7/42 (16%)
Frame = +1
Query: 415 PPPPPPPXXGXKFFFXXXP-------PPPPXGGXXFXXPPPP 519
PPPPPPP P PPPP PPP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 28.3 bits (60), Expect = 1.9
Identities = 17/67 (25%), Positives = 18/67 (26%)
Frame = +3
Query: 510 PPPPPPPXXXGGGXGXXXXXXPPPPPPXGGGXXXXXXXXXPPPPPXXFFXXXGXXXXKKK 689
P PPP P G P P P P PPP KK+
Sbjct: 251 PAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKR 310
Query: 690 KXXXXPP 710
PP
Sbjct: 311 PPPPPPP 317
Score = 26.6 bits (56), Expect = 5.8
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 2/61 (3%)
Frame = +1
Query: 415 PPPPPPPXXGXKFFFXXXPPPPPXGGXXFXXPPPPPP--PPXXXGGGXXFXXXXXPPPPP 588
P PP P PP P G PP P PP G P PP
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Query: 589 P 591
P
Sbjct: 478 P 478
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 38.7 bits (86), Expect = 0.001
Identities = 24/60 (40%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = -1
Query: 590 GGGGGGXXXXXXXXPP-PXXXGGGGGGGGXXKXXPPXGGGGGXXKKKNXXPXXGGGGGGG 414
GGG GG PP P GG GG GG GG GG P GGG GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Score = 35.9 bits (79), Expect = 0.009
Identities = 25/75 (33%), Positives = 26/75 (34%)
Frame = -1
Query: 641 GGGXXXXXXXXXXXPPXGGGGGGXXXXXXXXPPPXXXGGGGGGGGXXKXXPPXGGGGGXX 462
GGG PP GG GG GG GGG G + P G GGG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGP-GGFGGGPG 245
Query: 461 KKKNXXPXXGGGGGG 417
GGG GG
Sbjct: 246 GFGGGLGGFGGGPGG 260
Score = 30.3 bits (65), Expect = 0.47
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = -2
Query: 643 GGGGGXXXXXXXXXPPPXGGGGGGXXXXKXPXPPPXXXGGGGGGGXXXKXPPPXGGGGG 467
GGG G PP GG GG G GGG G P GGG G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPG 245
Score = 30.3 bits (65), Expect = 0.47
Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = -3
Query: 531 GGGGGG--GGXXKXXPPPGGGGGXXXKKKFXPXXWGGGGGG 415
GGG GG GG PGG GG P +GGG GG
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGG 267
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 36.3 bits (80), Expect = 0.007
Identities = 16/30 (53%), Positives = 16/30 (53%)
Frame = +1
Query: 508 PPPPPPPPXXXGGGXXFXXXXXPPPPPPXG 597
PPPPPPPP F PPPPPP G
Sbjct: 9 PPPPPPPPG-------FEPPSQPPPPPPPG 31
Score = 35.5 bits (78), Expect = 0.013
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +2
Query: 470 PPPPPGGGXFXXXPPPPPPPP 532
PPPPP G PPPPPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 34.7 bits (76), Expect = 0.022
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +3
Query: 468 PPPPPXGGGXFXXXPPPPPPP 530
PPPPP G PPPPPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 32.7 bits (71), Expect = 0.088
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +1
Query: 409 GXPPPPPPPXXGXKFFFXXXPPPPPXGG 492
G PPPPPPP F PPPPP G
Sbjct: 7 GNPPPPPPPPG---FEPPSQPPPPPPPG 31
Score = 32.7 bits (71), Expect = 0.088
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 470 PPPPPGGGXFXXXPPPPPPPP 532
PPPPP F PPPPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
Score = 32.3 bits (70), Expect = 0.12
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 406 GGXPPPPPPPXXGXKFFFXXXPPPPPXG 489
G PPPPPPP PPPPP G
Sbjct: 7 GNPPPPPPPPGFEPP---SQPPPPPPPG 31
Score = 32.3 bits (70), Expect = 0.12
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +3
Query: 468 PPPPPXGGGXFXXXPPPPPPP 530
PPPPP G PPPPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
Score = 29.9 bits (64), Expect = 0.62
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 469 PPPPPXGGXXFXXPPPPPPPPXXXG 543
PPPPP G PP PPPP G
Sbjct: 11 PPPPPPG----FEPPSQPPPPPPPG 31
Score = 27.9 bits (59), Expect = 2.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 573 PPPPPPXGGGXXXXXXXXXPPPPP 644
PPPPPP G PPPPP
Sbjct: 9 PPPPPPPPG--FEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 5.8
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 468 PPPPPXGGGXFXXXPPPPPPPXXXG 542
PPPPP G P PPPP G
Sbjct: 11 PPPPPPG----FEPPSQPPPPPPPG 31
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 31.9 bits (69), Expect = 0.15
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 406 GGXPPPPPPPXXGXKFFFXXXPPPP 480
GG PPPPPPP F+ P P
Sbjct: 303 GGLPPPPPPPPPSNDFWKDSNEPAP 327
Score = 27.9 bits (59), Expect = 2.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 476 PPPGGGXFXXXPPPPPPPP 532
P G PPPPPPPP
Sbjct: 295 PSSGDSANGGLPPPPPPPP 313
Score = 26.6 bits (56), Expect = 5.8
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 509 PPPPPPPP 532
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.5 bits (68), Expect = 0.20
Identities = 20/58 (34%), Positives = 20/58 (34%)
Frame = +1
Query: 418 PPPPPPXXGXKFFFXXXPPPPPXGGXXFXXPPPPPPPPXXXGGGXXFXXXXXPPPPPP 591
PP P PPPPP PPPP PP G PPPP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPP-----MSVPPPPSAPPMPAG------PPSAPPPPLP 1736
Score = 30.3 bits (65), Expect = 0.47
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +2
Query: 419 PPPPPXXXGXNFFFXXXPPPPPGGGXFXXXPPPPPPPP 532
PPPPP PPPP PP PPPP
Sbjct: 1707 PPPPPMSV----------PPPPSAPPMPAGPPSAPPPP 1734
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 30.7 bits (66), Expect = 0.36
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 10/58 (17%)
Frame = +1
Query: 415 PPPPPPPXXGXKFFFXXXPPPPPX----------GGXXFXXPPPPPPPPXXXGGGXXF 558
P PPPPP K P G PPPPPPPP G F
Sbjct: 905 PTPPPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPPPPPLVSAAGGKF 962
Score = 30.7 bits (66), Expect = 0.36
Identities = 17/53 (32%), Positives = 18/53 (33%), Gaps = 7/53 (13%)
Frame = +2
Query: 416 PPPPPPXXXGXNFFFXXXPP-------PPPGGGXFXXXPPPPPPPPXXXGGXG 553
PPPPPP + P G PPPPPPPP G
Sbjct: 907 PPPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPPPPPLVSAAG 959
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 2.5
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +1
Query: 508 PPPPPPPPXXXGGGXXFXXXXXPPPPPP 591
PPP PP PPPPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPP 194
Score = 27.1 bits (57), Expect(2) = 0.52
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1
Query: 499 FXXPPPPPPPP 531
+ PPPPPPPP
Sbjct: 187 YNPPPPPPPPP 197
Score = 26.2 bits (55), Expect = 7.7
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = +1
Query: 415 PPPPPPPXXGXKFFFXXXPPPPPXGGXXFXXPPPPPPPPXXXGGGXXFXXXXXPPPPPP 591
PPPPPPP + P P PP PPPPPP
Sbjct: 189 PPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQAD---PLPAPPPPPPP 244
Score = 21.4 bits (43), Expect(2) = 0.52
Identities = 8/23 (34%), Positives = 9/23 (39%)
Frame = +1
Query: 415 PPPPPPPXXGXKFFFXXXPPPPP 483
PP P + PPPPP
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPP 195
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.6 bits (56), Expect = 5.8
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = -1
Query: 590 GGGGGGXXXXXXXXPPPXXXGGGGGGGGXXKXXPPXGGGGGXXKKKNXXPXXGGGGGG 417
GG GG GGG GG GG GG + GG GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.6 bits (56), Expect = 5.8
Identities = 17/60 (28%), Positives = 17/60 (28%)
Frame = +1
Query: 418 PPPPPPXXGXKFFFXXXPPPPPXGGXXFXXPPPPPPPPXXXGGGXXFXXXXXPPPPPPXG 597
PP P P PP P PPP P P PP P P G
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIP-APSGAPPVPAPSG 1090
Score = 26.6 bits (56), Expect = 5.8
Identities = 22/83 (26%), Positives = 22/83 (26%), Gaps = 4/83 (4%)
Frame = +1
Query: 409 GXPPPPPPPXXGX---KFFFXXXPPPPPXGGXXFXXPP-PPPPPPXXXGGGXXFXXXXXP 576
G PP P P K P P P G P PP P G
Sbjct: 1090 GIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAA 1149
Query: 577 PPPPPXGGXXXXXXXXXXXPPPP 645
PP P G PP P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVP 1172
Score = 26.2 bits (55), Expect = 7.7
Identities = 18/63 (28%), Positives = 18/63 (28%), Gaps = 4/63 (6%)
Frame = +3
Query: 468 PPPPPXGGGXFXXXP----PPPPPPXXXGGGXGXXXXXXPPPPPPXGGGXXXXXXXXXPP 635
PP P G P PP P P PP PPP PP
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 636 PPP 644
PP
Sbjct: 1210 VPP 1212
Score = 26.2 bits (55), Expect = 7.7
Identities = 18/62 (29%), Positives = 18/62 (29%), Gaps = 3/62 (4%)
Frame = +3
Query: 468 PPPPPXGGGXFXXXPP---PPPPPXXXGGGXGXXXXXXPPPPPPXGGGXXXXXXXXXPPP 638
PP P G PP PP P G PP P P G PP
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Query: 639 PP 644
P
Sbjct: 1239 VP 1240
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 5.8
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 509 PPPPPPPP 532
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 5.8
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 509 PPPPPPPP 532
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.2 bits (55), Expect = 7.7
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +1
Query: 418 PPPPPPXXGXKFFFXXXPPPPPXGGXXFXXPPPPPPPPXXXGGGXXFXXXXXPPPPP 588
PP P P K PPPPP P PP P P PP
Sbjct: 731 PPTPAPTPAVKHH----PPPPPVRSS--ISPSMPPAPLTHANSSTPMNYVSQPESPP 781
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.2 bits (55), Expect = 7.7
Identities = 13/45 (28%), Positives = 13/45 (28%)
Frame = +3
Query: 510 PPPPPPPXXXGGGXGXXXXXXPPPPPPXGGGXXXXXXXXXPPPPP 644
PPPPP G PP P G P P P
Sbjct: 1883 PPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAPVP 1927
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,608,137
Number of Sequences: 5004
Number of extensions: 64750
Number of successful extensions: 820
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 549226150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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