Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_H19
(813 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 34 0.15
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 33 0.27
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 33 0.36
09_04_0506 - 18188785-18190599 31 1.1
10_08_0218 - 15967064-15967906 31 1.4
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.4
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 30 1.9
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 30 1.9
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 1.9
02_04_0654 - 24755339-24755408,24755488-24755624,24756243-247563... 30 1.9
07_03_1136 + 24218601-24218734,24218769-24219906 30 2.5
04_01_0159 - 1824343-1824405,1824485-1824595,1825282-1825448,182... 30 2.5
03_01_0515 - 3864796-3865425 30 2.5
12_02_1174 - 26696869-26698191 29 3.3
08_02_1291 + 25930056-25930067,25930289-25930334,25930434-259305... 29 3.3
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 29 4.4
06_01_0690 + 5033943-5034740 29 4.4
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 28 7.7
07_03_0809 - 21669632-21669637,21669871-21670131,21670573-216707... 28 7.7
06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979 28 7.7
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646... 28 7.7
02_01_0296 + 1978565-1981197,1981216-1981639,1982280-1982771,198... 28 7.7
02_01_0077 - 546033-546223,546314-546566,546635-546865,547165-54... 28 7.7
01_07_0303 + 42615578-42615709,42616273-42616312,42616393-426164... 28 7.7
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +3
Query: 648 PXXXRXAXPPGGRXXDXPXPPCPPXXPAGAXRPXXGPXXPRRXXAXGXPXRPPP 809
P R PP PP PP G P P P G P PPP
Sbjct: 1166 PAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPP 1219
>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -3
Query: 805 GGRXGXPXAXXRRGXXGPXXGRXAPAGXXGGXGGXGXSXHRPPGGXAXRXXXG 647
GGR G P R G GR P G G G G PGG R G
Sbjct: 1040 GGRDG-PGGFGGRDGPGGFIGREGPGGFGGREGPVGFGGQESPGGFGGRKGPG 1091
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = -3
Query: 808 GGGRXGXPXAXXRRGXXGPXXGRXAPAGXXGGXGGXGXSXHRPPGGXAXR 659
GG R G P R G GR P G G G G PGG R
Sbjct: 1021 GGIRDG-PGGFGGRDGPGGFGGRDGPGGFGGRDGPGGFIGREGPGGFGGR 1069
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = +3
Query: 672 PPG-GRXXDXPXPPCPPXXPAGAXRPXXGPXXPRRXXAXGXPXRPPP 809
PPG G PP PP PA P P G P PPP
Sbjct: 309 PPGAGAGAGTGAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPP 355
Score = 31.9 bits (69), Expect = 0.62
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +3
Query: 672 PPGGRXXDXPXPPCPPXXPAGAXRPXXGPXXPRRXXAXGXPXRPPP 809
P P PP PP PA P GP P A G PP
Sbjct: 340 PSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPP 385
>09_04_0506 - 18188785-18190599
Length = 604
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = -3
Query: 808 GGGRXGXPXAXXRRGXXGPXXGRXAPAGXXGGXGGXGXSXHRPPGGXAXRXXXG 647
GGG G P G G G GG GG G + R GG R G
Sbjct: 293 GGGAAGGPGGAQVGGNYGGGRGGGGGGPGGGGGGGGGGNWGRGGGGMGGRGQAG 346
>10_08_0218 - 15967064-15967906
Length = 280
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -3
Query: 808 GGGRXGXPXAXXRRGXXGPXXGRXAPAGXXGGXGGXG 698
GG G + G GP G A AG GG GG G
Sbjct: 242 GGSGSGSGSGSGQAGGYGPYGGGYAQAGGQGGGGGGG 278
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +3
Query: 672 PPGGRXXDXPXPPCPPXXPAGAXRPXXGPXXPRRXXAXGXPXRPPP 809
PP + PP PP A P GP P A G P PPP
Sbjct: 316 PPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPP--PPAKGPPPPPPP 359
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +3
Query: 648 PXXXRXAXPPGGRXXDXPXPPCPPXXPAGAXRPXXGPXXPRRXXAXGXPXRPPP 809
P A PP PP PP P P GP P P PPP
Sbjct: 318 PPKPAAAAPPPPPPPKAAPPPPPPKGPP-PPPPAKGPPPPPPPKGPSPPPPPPP 370
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +3
Query: 672 PPGGRXXDXPXPPCPPXXPAGAXRPXXGPXXPRRXXAXGXPXRPPP 809
PP R P PP PP P G P P R A G P
Sbjct: 615 PPPPRPPGAPPPPPPPGKPGGPPPPPPRPGSLPRNLAGGDKVHRAP 660
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +3
Query: 672 PPGGRXXDXPXPPCPPXXPAGAXRPXXGPXXPRRXXAXGXPXRPPP 809
PP R P PP PP P G P P R A G P
Sbjct: 920 PPPPRPPGAPPPPPPPGKPGGPPPPPPPPGSLPRNLAGGDKVHRAP 965
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Frame = +3
Query: 672 PPGGRXX--DXPXPPCPPXXPAGA-XRPXXGPXXPRRXXAXGXPXRPPP 809
PP R P PP PP PA A R P P P PPP
Sbjct: 719 PPANRSNGPSAPAPPLPPPLPAAANKRNPPAPPPPPLMTGKKAPAPPPP 767
>02_04_0654 -
24755339-24755408,24755488-24755624,24756243-24756326,
24756929-24756944,24758035-24758405
Length = 225
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 675 PGGRXXDXPXPPCPPXXPAGAXRPXXGPXXPRRXXAXGXPXRPPP 809
P P PP PP PA + RP P P P PPP
Sbjct: 25 PSSEEQRAPPPPPPPLFPAMSARPQ--PPRPAHPARFVKPMPPPP 67
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 6/52 (11%)
Frame = -3
Query: 808 GGGRXGXPXAXXRRGXXG------PXXGRXAPAGXXGGXGGXGXSXHRPPGG 671
GGG G P G G P GR G G GG G R PGG
Sbjct: 137 GGGGGGAPRRVLGGGGGGGALARPPGGGRGGALGRPPGGGGGGGGPGRAPGG 188
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/54 (35%), Positives = 21/54 (38%), Gaps = 8/54 (14%)
Frame = -3
Query: 808 GGGRXGXPXAXXRRGXXGPXXGRXAPAGXXG--------GXGGXGXSXHRPPGG 671
GGG G P + G AP G G G GG G + RPPGG
Sbjct: 110 GGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARPPGG 163
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Frame = -3
Query: 808 GGGRXGXPXAXXRRGXXGPXXGRXAP-----AGXXGGXGGXGXSXHRPPGG 671
GGG G P G G GR AP G GG GG G + R GG
Sbjct: 175 GGGGGGGPGRAPGGGGGGGGPGR-APGGGGGGGGLGGGGGEGGAPERVIGG 224
>04_01_0159 -
1824343-1824405,1824485-1824595,1825282-1825448,
1825853-1826029,1826404-1826656
Length = 256
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -3
Query: 394 TGAESVVPGGGCSRV*QYHVRPPQAFRGHQPSAAAPFXLRSNSVVCRSNS 245
T + S GGCS + PP AFRG+ + P + V CR+ S
Sbjct: 59 TASASASASGGCSPAPPWAPSPP-AFRGNVKARYQPVMFNGSIVYCRTPS 107
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +3
Query: 672 PPGGRXXDXPXPPCPPXXPAGAXRPXXGPXXPRRXXAXGXPXRPPP 809
PP P PP PP P A P P P PPP
Sbjct: 75 PPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPPPP 120
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/54 (29%), Positives = 19/54 (35%)
Frame = +3
Query: 648 PXXXRXAXPPGGRXXDXPXPPCPPXXPAGAXRPXXGPXXPRRXXAXGXPXRPPP 809
P + PP P PP PP P P P P+ + P PPP
Sbjct: 141 PPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQP-KPQPPPSLQPPSPPPP 193
>08_02_1291 +
25930056-25930067,25930289-25930334,25930434-25930546,
25930645-25930930,25931357-25931421,25931642-25931693,
25931774-25931883,25932611-25932641,25932853-25933004,
25934622-25934840
Length = 361
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 222 HGGLGLTNVSMSQMQGQVDYDFGVGGRLPI 133
+GG L ++Q G Y +G GGRLP+
Sbjct: 100 YGGPALPRYGIAQFPGGSGYPYGYGGRLPM 129
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/56 (28%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Frame = +3
Query: 648 PXXXRXAXPPGGRXXDXPXP--PCPPXXPAGAXRPXXGPXXPRRXXAXGXPXRPPP 809
P + PP + P P PP P+ P P P P RPPP
Sbjct: 561 PPIPKLLSPPAPQAPMPPLKASPVPPPEPSPPPAPKAAPPPPPPKSTGPGPPRPPP 616
>06_01_0690 + 5033943-5034740
Length = 265
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -3
Query: 808 GGGRXGXPXAXXRRGXXGPXXGRXAPAGXXGGXGGXG 698
GG G + G GP G A G GG GG G
Sbjct: 165 GGSGYGSGSGYGQAGGYGPYGGGYAQGGGGGGGGGGG 201
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/46 (30%), Positives = 17/46 (36%)
Frame = +3
Query: 672 PPGGRXXDXPXPPCPPXXPAGAXRPXXGPXXPRRXXAXGXPXRPPP 809
PP + P PP PP + P P P + P PPP
Sbjct: 83 PPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPP 128
>07_03_0809 -
21669632-21669637,21669871-21670131,21670573-21670752,
21671458-21672819
Length = 602
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 94 SLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMN 249
+L +D L+ YD+ PPDS+ V HA + +R+L + +N
Sbjct: 160 NLWTQVDILILRYDK--PPDSRFVQEALAAHAHATEGSETTAIRLLEVISLN 209
>06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979
Length = 304
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +3
Query: 699 PXPPCPPXXPAGAXRPXXGPXXPRRXXAXGXPXRPP 806
P PP PP PA P P P+ P PP
Sbjct: 55 PPPPPPPPQPAKEPPPPTKPKHPKPKQQQHPPPPPP 90
>04_03_0660 +
18463011-18463322,18463424-18463516,18464500-18464607,
18464892-18465044,18465256-18465354,18465443-18465571,
18465987-18466166,18466208-18466246,18466247-18466363,
18466445-18466609
Length = 464
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +3
Query: 666 AXPPGGRXXDXPXPPCPPXXPAGAXRPXXGPXXPRRXXAXG 788
A PP R P PP PP P +P P P R G
Sbjct: 37 APPPPARHR-APSPPRPPPPPPPPTQPAPPPPPPARSGGGG 76
>02_01_0296 +
1978565-1981197,1981216-1981639,1982280-1982771,
1982950-1983087
Length = 1228
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 392 GRGERSPRRWLQPRLAVPRQASTSVPRTP 306
GRG RS R L+P LA+ A + +P P
Sbjct: 442 GRGPRSTLRILRPGLAISEMARSMLPAEP 470
>02_01_0077 -
546033-546223,546314-546566,546635-546865,547165-547331,
547369-548008
Length = 493
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +3
Query: 675 PGGRXXDXPXPPCPPXXPAGAXRPXXGPXXPRRXXAXGXPXRPP 806
P + D P P PP P +P P PRR A PP
Sbjct: 67 PPSQEPDTPEP-APPTPPQQQQQPWQSPLPPRREPAPPRTVVPP 109
>01_07_0303 +
42615578-42615709,42616273-42616312,42616393-42616477,
42616634-42616813,42618274-42618354,42618890-42619011,
42619867-42620723,42621656-42621897,42622107-42622200,
42622306-42622476,42622695-42622740,42624101-42624111,
42624141-42624392
Length = 770
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +3
Query: 672 PPGGRXXDXPXPPCPPXXPAGAXRPXXGPXXPR-RXXAXGXPXRPP 806
P GG D P P PP P A RP R A G P PP
Sbjct: 719 PRGGSGGD-PAAPLPPTPPPEAARPQGRRRRGAPRLLALGRPGEPP 763
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,132,779
Number of Sequences: 37544
Number of extensions: 403466
Number of successful extensions: 1758
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1669
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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