Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_H16
(962 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.13
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.13
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.13
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 32 0.70
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 32 0.70
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 32 0.70
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 32 0.70
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 32 0.70
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.9
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 4.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.9
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 4.9
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 4.9
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 29 4.9
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 29 4.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 8.6
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 8.6
U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body prot... 28 8.6
U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body prot... 28 8.6
U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body prot... 28 8.6
J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein ( C.ele... 28 8.6
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = -3
Query: 783 PPPPPXXXXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXXXXXPPPXXXXXF 628
PPPPP PPPPPPP PPP F
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = -1
Query: 782 PPPPXXXXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXXXXXPPPP 645
PPPP PPPPPPP PPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = -1
Query: 782 PPPPXXXXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXXXXXPPPP 645
PPPP PPPPPPP PPPP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = -1
Query: 782 PPPPXXXXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXXXXXPPPP 645
PPPP PPPPPPP PPPP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP PPP
Sbjct: 726 PPPPPPPGGLPPITGGPPP 744
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPP PPPP
Sbjct: 727 PPPPPPGGLPPITGGPPPP 745
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = -3
Query: 783 PPPPPXXXXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXXXXXPPPXXXXXF 628
PPPPP PPPPPPP PPP F
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = -1
Query: 782 PPPPXXXXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXXXXXPPPP 645
PPPP PPPPPPP PPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = -1
Query: 782 PPPPXXXXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXXXXXPPPP 645
PPPP PPPPPPP PPPP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = -1
Query: 782 PPPPXXXXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXXXXXPPPP 645
PPPP PPPPPPP PPPP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP PPP
Sbjct: 726 PPPPPPPGGLPPITGGPPP 744
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPP PPPP
Sbjct: 727 PPPPPPGGLPPITGGPPPP 745
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = -3
Query: 783 PPPPPXXXXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXXXXXPPPXXXXXF 628
PPPPP PPPPPPP PPP F
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 376
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = -1
Query: 782 PPPPXXXXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXXXXXPPPP 645
PPPP PPPPPPP PPPP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = -1
Query: 782 PPPPXXXXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXXXXXPPPP 645
PPPP PPPPPPP PPPP
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = -1
Query: 782 PPPPXXXXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXXXXXPPPP 645
PPPP PPPPPPP PPPP
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP PPP
Sbjct: 309 PPPPPPPGGLPPITGGPPP 327
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPP PPPP
Sbjct: 310 PPPPPPGGLPPITGGPPPP 328
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 31.9 bits (69), Expect = 0.70
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP PPPP
Sbjct: 477 PPPPPPPPENEPEEFPPPP 495
Score = 31.9 bits (69), Expect = 0.70
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP PPPP
Sbjct: 478 PPPPPPPENEPEEFPPPPP 496
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 31.9 bits (69), Expect = 0.70
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP PPPP
Sbjct: 39 PPPPPPPPCGGGYEAPPPP 57
Score = 31.9 bits (69), Expect = 0.70
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP PPPP
Sbjct: 40 PPPPPPPCGGGYEAPPPPP 58
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 31.9 bits (69), Expect = 0.70
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP PPPP
Sbjct: 69 PPPPPPPLISILQQAPPPP 87
Score = 31.9 bits (69), Expect = 0.70
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP PPPP
Sbjct: 84 PPPPPPPPPPTLKAPPPPP 102
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP PPP
Sbjct: 68 PPPPPPPPLISILQQAPPP 86
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.9 bits (69), Expect = 0.70
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP PPPP
Sbjct: 1341 PPPPPPPPSDDLTPVPPPP 1359
Score = 31.9 bits (69), Expect = 0.70
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP PPPP
Sbjct: 1342 PPPPPPPSDDLTPVPPPPP 1360
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPP PPPP
Sbjct: 1343 PPPPPPSDDLTPVPPPPPP 1361
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP P PP
Sbjct: 1339 PPPPPPPPPPSDDLTPVPP 1357
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP PPP
Sbjct: 1340 PPPPPPPPPSDDLTPVPPP 1358
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
P PPPPP PPPP
Sbjct: 1375 PVPPPPPLFSPSMILPPPP 1393
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.9 bits (69), Expect = 0.70
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP PPPP
Sbjct: 561 PPPPPPPLPQNLSGAPPPP 579
Score = 31.9 bits (69), Expect = 0.70
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP PPPP
Sbjct: 576 PPPPPPPPPMLGGPPPPPP 594
Score = 31.9 bits (69), Expect = 0.70
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP PPPP
Sbjct: 577 PPPPPPPPMLGGPPPPPPP 595
Score = 31.9 bits (69), Expect = 0.70
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP PPPP
Sbjct: 578 PPPPPPPMLGGPPPPPPPP 596
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = -1
Query: 782 PPPPXXXXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXXXXXPPPP 645
PPPP PPPPPP PPPP
Sbjct: 766 PPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPP 811
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = -1
Query: 782 PPPPXXXXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXXXXXPPPP 645
PPPP PPPPPP PPPP
Sbjct: 767 PPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPP 812
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = -1
Query: 782 PPPPXXXXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXXXXXPPPP 645
PPPP PPPPP P PPPP
Sbjct: 768 PPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPP 813
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = -1
Query: 782 PPPPXXXXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXXXXXPPPP 645
PPPP PPPP PP PPPP
Sbjct: 769 PPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPP 814
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = -1
Query: 782 PPPPXXXXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXXXXXPPPP 645
PPPP PPPPPP PPPP
Sbjct: 766 PPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPP 811
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = -1
Query: 782 PPPPXXXXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXXXXXPPPP 645
PPPP PPPPPP PPPP
Sbjct: 767 PPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPP 812
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = -1
Query: 782 PPPPXXXXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXXXXXPPPP 645
PPPP PPPPP P PPPP
Sbjct: 768 PPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPP 813
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = -1
Query: 782 PPPPXXXXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXXXXXPPPP 645
PPPP PPPP PP PPPP
Sbjct: 769 PPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPP 814
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 698 PPPPPPXXXXXXXXPPPP 645
PPPPPP PPPP
Sbjct: 538 PPPPPPVGMANGGPPPPP 555
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
P PPPPP PPPP
Sbjct: 536 PTPPPPPPVGMANGGPPPP 554
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPP P PPPP
Sbjct: 488 PPPPPMPSINGHAPNPPPP 506
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPP PPPP
Sbjct: 538 PPPPPPVGMANGGPPPPPP 556
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 698 PPPPPPXXXXXXXXPPPP 645
PPPPPP PPPP
Sbjct: 252 PPPPPPCPMPIPCPPPPP 269
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 698 PPPPPPXXXXXXXXPPPP 645
PPPPPP PPPP
Sbjct: 334 PPPPPPGMRYPGGMPPPP 351
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
P PPPPP PPPP
Sbjct: 285 PRPPPPPSSGMWPPPPPPP 303
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPP PPPP
Sbjct: 334 PPPPPPGMRYPGGMPPPPP 352
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPP 648
PPPPPPP PPP
Sbjct: 63 PPPPPPPPPPMCPPPPPP 80
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 698 PPPPPPXXXXXXXXPPPP 645
PPPPPP PPPP
Sbjct: 63 PPPPPPPPPPMCPPPPPP 80
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/48 (31%), Positives = 15/48 (31%), Gaps = 2/48 (4%)
Frame = -1
Query: 782 PPPPXXXXXXXXXXXXXXXXXXXXXXXPPP--PPPPXXXXXXXXPPPP 645
PPPP PPP PPPP PPPP
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPP 78
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP PP P
Sbjct: 64 PPPPPPPPPMCPPPPPPMP 82
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 698 PPPPPPXXXXXXXXPPPP 645
PPPPPP PPPP
Sbjct: 344 PPPPPPGMRYPGGMPPPP 361
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
P PPPPP PPPP
Sbjct: 295 PRPPPPPSSGMWPPPPPPP 313
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPP PPPP
Sbjct: 344 PPPPPPGMRYPGGMPPPPP 362
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 699 PPPPPPPXXXXXXXXPPP 646
PPPPPPP PPP
Sbjct: 7 PPPPPPPPPPPAASAPPP 24
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP PPP
Sbjct: 6 PPPPPPPPPPPPAASAPPP 24
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP P PP
Sbjct: 156 PPPPPPPPVSVPSSKPTPP 174
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP PPP
Sbjct: 157 PPPPPPPVSVPSSKPTPPP 175
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPP PPPP
Sbjct: 158 PPPPPPVSVPSSKPTPPPP 176
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 699 PPPPPPPXXXXXXXXPPP 646
PPPPPPP PPP
Sbjct: 7 PPPPPPPPPPPAASAPPP 24
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP PPP
Sbjct: 6 PPPPPPPPPPPPAASAPPP 24
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP P PP
Sbjct: 156 PPPPPPPPVSVPSSKPTPP 174
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP PPP
Sbjct: 157 PPPPPPPVSVPSSKPTPPP 175
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPP PPPP
Sbjct: 158 PPPPPPVSVPSSKPTPPPP 176
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPP 648
PPPPPPP PPP
Sbjct: 1014 PPPPPPPADFFANIAPPP 1031
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP PPP
Sbjct: 1013 PPPPPPPPADFFANIAPPP 1031
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPP 648
PPPPPPP PPP
Sbjct: 253 PPPPPPPADFFANIAPPP 270
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP PPP
Sbjct: 252 PPPPPPPPADFFANIAPPP 270
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP PPP
Sbjct: 122 PPPPPPPRKSRAGGSSPPP 140
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPP PPPP
Sbjct: 123 PPPPPPRKSRAGGSSPPPP 141
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPPP PP P
Sbjct: 114 PPPPPPPSGLGVAPQPPRP 132
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PPPPPP PPPP
Sbjct: 134 PPPPPPHYPPPPPHYPPPP 152
>U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body protein
1, isoform b protein.
Length = 369
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PP PPPP PPPP
Sbjct: 147 PPRPPPPVELSPPPRPPPP 165
>U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body protein
1, isoform a protein.
Length = 1010
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PP PPPP PPPP
Sbjct: 788 PPRPPPPVELSPPPRPPPP 806
>U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body protein
1, isoform c protein.
Length = 999
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PP PPPP PPPP
Sbjct: 788 PPRPPPPVELSPPPRPPPP 806
>J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein (
C.elegans vinculin (deb-1) gene, complete cds. ).
Length = 1010
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 701 PPPPPPPXXXXXXXXPPPP 645
PP PPPP PPPP
Sbjct: 788 PPRPPPPVELSPPPRPPPP 806
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,473,168
Number of Sequences: 27780
Number of extensions: 369890
Number of successful extensions: 7275
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2206
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2490012644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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