Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_H13
(778 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 53 4e-08
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 50 5e-07
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 34 0.020
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 34 0.020
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 33 0.046
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 33 0.046
SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual 32 0.11
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 32 0.11
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 31 0.14
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 31 0.14
SPBC1773.12 |||transcription factor |Schizosaccharomyces pombe|c... 30 0.32
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 30 0.43
SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces pomb... 30 0.43
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 29 0.74
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 29 0.98
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 28 1.3
SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr 2|||M... 28 1.7
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 27 2.3
SPAC30D11.10 |rad22||DNA repair protein Rad22|Schizosaccharomyce... 27 2.3
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 27 2.3
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 27 2.3
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 27 3.0
SPAC19A8.12 |dcp2||mRNA decapping complex subunit Dcp2|Schizosac... 27 3.0
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 27 3.0
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 27 4.0
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 27 4.0
SPBC776.01 |rpl29||60S ribosomal protein L29|Schizosaccharomyces... 27 4.0
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 27 4.0
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 27 4.0
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 26 5.2
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 26 5.2
SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces p... 26 6.9
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 26 6.9
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 26 6.9
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 26 6.9
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 26 6.9
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 53.2 bits (122), Expect = 4e-08
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +1
Query: 454 VSALAHGEVVCAVTVSSPTKYVYTGGKGCVKVWDISQPXKAPVSQLDCLX--RDNYIRSV 627
V L H VVC V S+ KY+ TG V+D+ K + RD Y+R++
Sbjct: 307 VHTLEHPSVVCCVKFSNNGKYLATGCNQAANVFDVQTGKKLFTLHEESPDPSRDLYVRTI 366
Query: 628 KLLPDGRTLIVGGEXSNLSIWDLAS 702
PDG+ L+ G E + +WDL++
Sbjct: 367 AFSPDGKYLVTGTEDRQIKLWDLST 391
Score = 35.9 bits (79), Expect = 0.006
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 469 HGEVVCAVTVSSPTKYVYTGGKG-CVKVWDISQPXKAPVSQLDCLXRDNYIRSVKLLPDG 645
H + V +V VS +++ +G K ++ WD+ + S L C N + SV PDG
Sbjct: 537 HTDFVLSVAVSPDSRWGLSGSKDRSMQFWDL----QTGQSYLTCQGHKNSVISVCFSPDG 592
Query: 646 RTLIVGGEXSNLSIWDLASPTP 711
R G IW + +P
Sbjct: 593 RQFASGSGDLRARIWSIDPASP 614
Score = 26.2 bits (55), Expect = 5.2
Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +1
Query: 481 VCAVTVSSPTKYVYTGGKG-CVKVWDISQPXKAPVSQLDCLXRDNYIRSVKLLPDGRTLI 657
V A+ +S +++ G ++VW +S V +L+ Y S+ PD L+
Sbjct: 446 VTAIAISPNDQFIAVGSLDQIIRVWSVSGTL---VERLEGHKESVY--SIAFSPDSSILL 500
Query: 658 VGGEXSNLSIWDL 696
G + +W+L
Sbjct: 501 SGSLDKTIKVWEL 513
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 49.6 bits (113), Expect = 5e-07
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +1
Query: 436 PRHARQVSALAHGEVVCAVTVSSPTKYVYTGGKGCVKVWDISQPXKAPVSQLDCLXR--D 609
P + + L H V+C V S+ K++ TG V+++ + Q + R D
Sbjct: 275 PISVQLLHTLEHTSVICYVRFSADGKFLATGCNRAAMVFNVETGKLITLLQEESSKREGD 334
Query: 610 NYIRSVKLLPDGRTLIVGGEXSNLSIWDLA 699
Y+RSV PDG+ L G E + IWD+A
Sbjct: 335 LYVRSVAFSPDGKYLATGVEDQQIRIWDIA 364
Score = 34.7 bits (76), Expect = 0.015
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +1
Query: 469 HGEVVCAVTVSSPTKYVYTGGKG-CVKVWDISQPXKAPVSQLDCLXRDNYIRSVKLLPDG 645
H + + +VTVS K++ +G K ++ W P SQL +N + SV + P+G
Sbjct: 511 HKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPH----SQLTLQGHNNSVISVAVSPNG 566
Query: 646 RTLIVGGEXSNLSIW 690
G IW
Sbjct: 567 HCFATGSGDLRARIW 581
Score = 32.7 bits (71), Expect = 0.060
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +1
Query: 448 RQVSALAHGEV-VCAVTVSSPTKYVYTGGKGC-VKVWDISQPXKAPVSQLDCLXRDNYIR 621
++ S+ G++ V +V S KY+ TG + +++WDI+Q V +L + I
Sbjct: 325 QEESSKREGDLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKR---VYRL-LTGHEQEIY 380
Query: 622 SVKLLPDGRTLIVGGEXSNLSIWDL 696
S+ DG+TL+ G + +WD+
Sbjct: 381 SLDFSKDGKTLVSGSGDRTVCLWDV 405
Score = 25.8 bits (54), Expect = 6.9
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1
Query: 616 IRSVKLLPDGRTLIVGGEXSNLSIWDL 696
+ SV PDG+ L+ G + + +W+L
Sbjct: 461 VYSVAFSPDGKYLVSGSLDNTIKLWEL 487
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 34.3 bits (75), Expect = 0.020
Identities = 15/71 (21%), Positives = 34/71 (47%)
Frame = +1
Query: 496 VSSPTKYVYTGGKGCVKVWDISQPXKAPVSQLDCLXRDNYIRSVKLLPDGRTLIVGGEXS 675
+S K++ G V+++DI+ + P+ + N + ++ DG+ L E
Sbjct: 48 ISPDKKFLAAAGNPHVRLYDINTSSQMPLMTFE--GHTNNVTAIAFHCDGKWLATSSEDG 105
Query: 676 NLSIWDLASPT 708
+ +WD+ +P+
Sbjct: 106 TVKVWDMRAPS 116
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 34.3 bits (75), Expect = 0.020
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = +1
Query: 514 YVYTGGKGCVKVWDISQPXKAPVSQLDCLXRDNYIRSVKLLPDGRTLIVGGEXSNLSIWD 693
+V G VKVWD+ + S Y+ +V + PDG GG L +WD
Sbjct: 165 FVSAGWDKAVKVWDL-ETFSLRTSHYG---HTGYVSAVTISPDGSLCASGGRDGTLMLWD 220
Query: 694 LASPT 708
L T
Sbjct: 221 LNEST 225
Score = 28.7 bits (61), Expect = 0.98
Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +1
Query: 463 LAHGEVVCAVTVSSPTKYVYTGGKG-CVKVWDISQPXKAPVSQLDCLXRDNYIRSVKLLP 639
+ H V +V++S + V +G + +K+W+I K ++ +++ V+ P
Sbjct: 102 VGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNIIGNCKYTITDGG---HSDWVSCVRFSP 158
Query: 640 --DGRTLIVGGEXSNLSIWDL 696
D T + G + +WDL
Sbjct: 159 NPDNLTFVSAGWDKAVKVWDL 179
Score = 25.8 bits (54), Expect = 6.9
Identities = 17/83 (20%), Positives = 38/83 (45%)
Frame = +1
Query: 448 RQVSALAHGEVVCAVTVSSPTKYVYTGGKGCVKVWDISQPXKAPVSQLDCLXRDNYIRSV 627
R+++ +H CA++ S + K +++WD+ K + + + + SV
Sbjct: 57 RRLTGHSHFVSDCALSFDSHYALSASWDK-TIRLWDLE---KGECTH-QFVGHTSDVLSV 111
Query: 628 KLLPDGRTLIVGGEXSNLSIWDL 696
+ PD R ++ G + IW++
Sbjct: 112 SISPDNRQVVSGSRDKTIKIWNI 134
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 33.1 bits (72), Expect = 0.046
Identities = 18/83 (21%), Positives = 37/83 (44%)
Frame = +1
Query: 451 QVSALAHGEVVCAVTVSSPTKYVYTGGKGCVKVWDISQPXKAPVSQLDCLXRDNYIRSVK 630
+V + +HGE + V V + G +KVWD+ + P +L I +
Sbjct: 200 EVMSFSHGEAIDVVLPMQSGSTVISAGGPSIKVWDLVAGRQTPTKKLS--NHQKSITCLA 257
Query: 631 LLPDGRTLIVGGEXSNLSIWDLA 699
+ + L+ GG ++ I++++
Sbjct: 258 MNSENTRLLSGGLDGHVKIYNIS 280
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 33.1 bits (72), Expect = 0.046
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = +1
Query: 484 CAVTVSSPTKYVYTGGKGCVKVWDISQPXKAPVSQL-DCLXRDNYIRSVKLLPDGRTLIV 660
CA + P + G ++ W K PV ++ D I + DG L+
Sbjct: 256 CAWNPAKPDNFATAVLDGSIQFWQKGSRTKRPVMKIKDAHLPQQGISCLSFSQDGNYLLS 315
Query: 661 GGEXSNLSIWDL 696
GE + L +WDL
Sbjct: 316 RGEDNALRVWDL 327
>SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual
Length = 421
Score = 31.9 bits (69), Expect = 0.11
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +1
Query: 556 ISQPXKAPVSQLDCLXRDNYIRSVKLLPDGRTLIVGGEXSNLSIWDL 696
IS+ A V + CL ++++ + L D RTLI GG +++ +WDL
Sbjct: 209 ISRFPNAFVIEGFCLGHEDFVSRMSLY-DNRTLISGGGDNHVFVWDL 254
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 460 ALAHGEVVCAVTVSSPTKYVYTGGKG-CVKVWDISQPXK 573
A A+GE + V S + T + C+++WD +QP K
Sbjct: 58 AAAYGEAIRQVAFSKDYSRMATVSEDKCLRLWDSTQPDK 96
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 31.9 bits (69), Expect = 0.11
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 433 IPRHARQVSALAHGEVVCAVTVSSPTKYVYTGG-KGCVKVWDIS 561
IP R S AH V +T+ + TGG +G VKVWDI+
Sbjct: 90 IPSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIA 133
Score = 31.9 bits (69), Expect = 0.11
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = +1
Query: 472 GEVVCAVTVSSPTKYVYTGGKGCVKVWDISQPXKAPVSQLDCLXRDNYIRSVKLLPDGRT 651
G ++ + +S T+ V G VKVW +S V+ LD ++ + ++ DG
Sbjct: 550 GAILKLIYISQGTQVVSAAADGLVKVWSLSS--GECVATLD--NHEDRVWALASRFDGSL 605
Query: 652 LIVGGEXSNLSIW 690
L+ GG + +S+W
Sbjct: 606 LVSGGADAVVSVW 618
Score = 25.4 bits (53), Expect = 9.2
Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Frame = +1
Query: 469 HGEVVCAVTVSS-PTKYVYTGGK--GCVKVWDISQPXKAPVSQLDCLXRDNYIRSVKLLP 639
HG V+ A+ +V G V++WD++ V + + IR + P
Sbjct: 144 HGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFE----GHSSVIRGLTFEP 199
Query: 640 DGRTLIVGGEXSNLSIWDL 696
G L+ G + +W++
Sbjct: 200 TGSFLLSGSRDKTVQVWNI 218
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 31.5 bits (68), Expect = 0.14
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +1
Query: 496 VSSPTKYVYTGGKGCVKVWDISQPXKAPVSQLDCLXRDNYIRSVKLLPDGRTLIVGGEXS 675
VS P + G + +WD+ + +APV+ + + + P+ R L GG
Sbjct: 473 VSEPCCFASVDALGNLNLWDLQKDVEAPVT--SDIPDGKPLNKIAWQPEKRNLACGGLNG 530
Query: 676 NLSIWDLASP 705
N+ I+ SP
Sbjct: 531 NVHIYKHLSP 540
>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 512
Score = 31.5 bits (68), Expect = 0.14
Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = +1
Query: 499 SSPTKYVYTGGKGCVKVWD-ISQPXKAPVSQLDCLXRDNY-IRSVKLLPDGRTLIVGGEX 672
+S K+ GG +++W I+ V L L R + V+ P+G L G+
Sbjct: 29 NSLNKFATCGGDSKIRIWQLITSESSTKVEYLSTLSRHTQAVNVVRFNPEGNILATAGDE 88
Query: 673 SNLSIW 690
+ +W
Sbjct: 89 GTIMLW 94
>SPBC1773.12 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 594
Score = 30.3 bits (65), Expect = 0.32
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 332 RRYLAVNQHIHSTYQPRDRCSLSLFPQT-P*WVLVYRGMRDKSPR*LMVRWSAR 490
RRY + Q IH P+D LFPQ+ P W+ VYR + +K+ V W R
Sbjct: 140 RRYPGIFQ-IH----PKDYTMNDLFPQSFPTWISVYRNVPEKAWANRCVEWYFR 188
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 29.9 bits (64), Expect = 0.43
Identities = 22/115 (19%), Positives = 49/115 (42%)
Frame = +1
Query: 358 YSFHVSAEGQMQPVPFPPDALMGPGIPRHARQVSALAHGEVVCAVTVSSPTKYVYTGGKG 537
Y+ V +EG P+ + IP H V LA +S+ + +G G
Sbjct: 367 YALDVKSEGSAAPLTERASRISAIEIPGHRADVRTLA---------LSANHDVILSGANG 417
Query: 538 CVKVWDISQPXKAPVSQLDCLXRDNYIRSVKLLPDGRTLIVGGEXSNLSIWDLAS 702
+K+W ++ + + ++C Y+ + + + + ++ + L ++D+AS
Sbjct: 418 SLKLW--NKKTTSCIRTIEC----GYVLAASFINNDKCIVSAYKSGELEVYDIAS 466
Score = 25.4 bits (53), Expect = 9.2
Identities = 14/69 (20%), Positives = 31/69 (44%)
Frame = +1
Query: 499 SSPTKYVYTGGKGCVKVWDISQPXKAPVSQLDCLXRDNYIRSVKLLPDGRTLIVGGEXSN 678
SS + + G +K+WD+S + I ++ + PD + + G S+
Sbjct: 183 SSDSFLLSVGKDSFMKLWDLSIQHCVETH----VDHQGEIWAMCVSPDAKRCLTAGTGSD 238
Query: 679 LSIWDLASP 705
+ +W+++ P
Sbjct: 239 VKVWEISFP 247
>SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 710
Score = 29.9 bits (64), Expect = 0.43
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +1
Query: 508 TKYVYTGG--KGCVKVWDISQPXKAPVS--QLDCLXRDN--YIRSVKLLPDGRTLIVGGE 669
TK GG G +KVWD+S P A +S Q+D + I +VK L DG T++
Sbjct: 166 TKDHLVGGCADGVIKVWDLSTPNSAIISRMQVDRARKGEAALIWAVKSLRDG-TIVSADS 224
Query: 670 XSNLSIWD 693
+ W+
Sbjct: 225 SGAVKFWN 232
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 29.1 bits (62), Expect = 0.74
Identities = 15/65 (23%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +1
Query: 511 KYVYTGG-KGCVKVWDISQPXKAPVSQLDCLXRDNYIRSVKLLPDGRTLIVGGEXSNLSI 687
+++YTG +K W++S + +Y++ + LL + L+ G ++L +
Sbjct: 103 RHIYTGSWDHTIKKWNVSTGECVET----LIGHTDYVKCLLLLEEEGLLLSGSTDASLIV 158
Query: 688 WDLAS 702
WD++S
Sbjct: 159 WDVSS 163
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 28.7 bits (61), Expect = 0.98
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Frame = +1
Query: 469 HGEVVCAVTVSSPTKYVYTGG--KGCVKVWDISQPXKAPVSQLDCLXRDNYIRSVKLLPD 642
H V VT + YV TG K C ++WD+ + V + +V + PD
Sbjct: 462 HLSDVDCVTFHPNSAYVLTGSSDKTC-RLWDVHRGHSVRVFN----GHTQPVTAVAIAPD 516
Query: 643 GRTLIVGGEXSNLSIWDLAS 702
G T+ + +WD+ +
Sbjct: 517 GHTMASADSEGLIHLWDIGT 536
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 28.3 bits (60), Expect = 1.3
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = +1
Query: 451 QVSALAHGEVVCAVTVSSPTKYVYTGGKG-CVKVWDISQPXKAPVSQLDCLX-RDNYIRS 624
+ + H + V ++ +KY+ + +++WD + + CL NY+ S
Sbjct: 89 ECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCS-----VRCLKGHTNYVSS 143
Query: 625 VKLLPDGRTLIVGGEXSNLSIWDLASPT 708
+ P G L+ G + IW+L T
Sbjct: 144 IDFNPLGTLLVSGSWDETVRIWNLQDGT 171
>SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 556
Score = 27.9 bits (59), Expect = 1.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 604 RDNYIRSVKLLPDGRTLIVGGEXSNLSIWDLAS 702
R + +++ PDG+ +I G + IWDL S
Sbjct: 260 RSSALQTALFHPDGKRVIAAGRRKYMYIWDLES 292
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 607 DNYIRSVKLLPDGRTLIVGGEXSNLSIW 690
+N I ++K DGR L VGG+ L IW
Sbjct: 238 NNAIWAMKFSRDGRYLAVGGQDRILRIW 265
>SPAC30D11.10 |rad22||DNA repair protein Rad22|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 469
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -1
Query: 667 PHPRSVSARRAAV*LTVCSCPFXNN 593
P P+ +SAR AA V S PF NN
Sbjct: 334 PSPKFISARAAAAAEGVVSAPFTNN 358
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 27.5 bits (58), Expect = 2.3
Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 3/91 (3%)
Frame = +1
Query: 448 RQVSALAHGEVVCAVTVSSPTKYVYTG---GKGCVKVWDISQPXKAPVSQLDCLXRDNYI 618
R + L G VC + S + + T K V +W P ++ L N +
Sbjct: 327 RLQNKLDTGSQVCNMAWSKTSNEIVTTHGFAKNQVSLW--KYPSLKNIANLTA--HTNRV 382
Query: 619 RSVKLLPDGRTLIVGGEXSNLSIWDLASPTP 711
+ + PDG++++ G L W L + P
Sbjct: 383 LYLSMSPDGQSIVTGAGDETLRFWKLFNKKP 413
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 27.5 bits (58), Expect = 2.3
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 472 GEVVCAVTVSSPTKYVYTGGK-GCVKVWD 555
G+ + ++ VSS +YTGG G V+ WD
Sbjct: 281 GKHIWSLVVSSANPIIYTGGNDGSVRSWD 309
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 27.1 bits (57), Expect = 3.0
Identities = 17/81 (20%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = +1
Query: 472 GEVVCAVTVSSPTKYVYTG-GKGCVKVWDISQPXKAPVSQLDCLXRDNYIRSVKLLPDGR 648
G ++ A S + + TG G ++WD + P++ + N++ V PD
Sbjct: 135 GTIISAQFSPSTSSRLVTGSGDFTARLWDCDT--QTPIATMK--GHTNWVSCVAWAPDAS 190
Query: 649 TLIVGGEXSNLSIWDLASPTP 711
+ G + + WD +P
Sbjct: 191 IIATGSMDNTIRFWDPKKGSP 211
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +1
Query: 541 VKVWDISQPXKAPVSQLDCLXRDNYIRSVKLLPDGRTLIVGGEXSNLSIW 690
+KVWD+ ++ + D ++ + +V PDG+ + GG + IW
Sbjct: 455 LKVWDV----RSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
>SPAC19A8.12 |dcp2||mRNA decapping complex subunit
Dcp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 27.1 bits (57), Expect = 3.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -1
Query: 490 PRRPPHHELARRLVSHASVYQDPSRRLG--EKGQAASVPRLIRGMNMLVYRQV 338
P PP RL SH + DP LG K +AS PR++ NML + V
Sbjct: 321 PLNPPIQSSNSRL-SHDNNSFDPFAYLGLDPKNPSASFPRVVSQNNMLTNKPV 372
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 27.1 bits (57), Expect = 3.0
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 616 IRSVKLLPDGRTLIVGGEXSNLSIWDL 696
+R + + DGR ++ G S L +WDL
Sbjct: 268 VRDLAVNRDGRYMVTAGADSLLKVWDL 294
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 26.6 bits (56), Expect = 4.0
Identities = 8/32 (25%), Positives = 17/32 (53%)
Frame = +1
Query: 616 IRSVKLLPDGRTLIVGGEXSNLSIWDLASPTP 711
I S+ L +G+ + + S++ W+ +P P
Sbjct: 399 INSITFLENGKRFVTTSDDSSMRFWEYGTPVP 430
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 26.6 bits (56), Expect = 4.0
Identities = 8/35 (22%), Positives = 18/35 (51%)
Frame = +1
Query: 592 DCLXRDNYIRSVKLLPDGRTLIVGGEXSNLSIWDL 696
D + + +R + + DGRT++ + + +W L
Sbjct: 211 DLVGHTDNVRDILISDDGRTILTASSDATIKLWSL 245
>SPBC776.01 |rpl29||60S ribosomal protein L29|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 61
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +3
Query: 102 IRRETEHAY--IEARDADFGRERRGLSRGSTQGRSQASST 215
I+R +H Y ++ RDA F R ++ +RG+ + QA ++
Sbjct: 21 IKRPQKHRYDSLKYRDAKFRRNQKFANRGTVEAIRQAKAS 60
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 26.6 bits (56), Expect = 4.0
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = -1
Query: 439 SVYQDPSRRLGEKGQAASVPRLIRGMNMLVYRQVSARD 326
S+ +D RLG+K + +++RG+N + + ++ RD
Sbjct: 547 SLIEDRHDRLGKKDFECMIKQILRGLNYIHSQGIAHRD 584
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 26.6 bits (56), Expect = 4.0
Identities = 14/50 (28%), Positives = 18/50 (36%)
Frame = +1
Query: 541 VKVWDISQPXKAPVSQLDCLXRDNYIRSVKLLPDGRTLIVGGEXSNLSIW 690
+ +W S Q+D D + L PDGR L NL W
Sbjct: 416 LSIWSYSS--SGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFW 463
Score = 25.8 bits (54), Expect = 6.9
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 541 VKVWDISQPXKAPVSQLDCLXRDNYIRSVKLLPDGRTLIVGGEXSNLSIWDLASPT 708
V VW+ + +++ D Y+ SVK DG L VG + I+D+ S T
Sbjct: 202 VYVWNADSGSVSALAETD---ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQT 254
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 26.2 bits (55), Expect = 5.2
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 469 HG-EVVCAVTVSSPTKYVYTGGKGCVKVWDISQPXKAPVSQLDCLXRDNYIRSVKLLPDG 645
HG E++ V TK+ GG ++VWD++ K L + N IR + D
Sbjct: 55 HGHEILDLDLVYDSTKFASCGGDKFIQVWDVN-TGKVDRRLGGHLAQINTIRYNE---DS 110
Query: 646 RTLIVGGEXSNLSIWDLAS 702
L G S + +WD S
Sbjct: 111 SILASGSFDSKVRLWDCRS 129
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 26.2 bits (55), Expect = 5.2
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = -1
Query: 457 RLVSHASVYQDPSRRLGEKGQAASVPRLI 371
+L+ HA++Y S+++ +K + S P+LI
Sbjct: 428 QLLGHANLYLTTSQQIAKKYRVVSFPKLI 456
>SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 309
Score = 25.8 bits (54), Expect = 6.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 625 VKLLPDGRTLIVGGEXSNLSIWD 693
++ PD R L +GG + S+WD
Sbjct: 200 IEFSPDNRHLAIGGADAITSLWD 222
>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 275
Score = 25.8 bits (54), Expect = 6.9
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = +3
Query: 132 EARDADFGRERRGLSRGSTQGRSQASSTTVPVP--RERGARRVRPGGVLGQGGAALRAAS 305
+A DA + R L RG R + + P +RG RR R G V G G +
Sbjct: 59 DAEDAYYEVHGRRLERGGGVLRVEWAKQPPPSGPGSKRGGRRERGGRVHGDSGRLRSRSP 118
Query: 306 SPY 314
SP+
Sbjct: 119 SPH 121
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 25.8 bits (54), Expect = 6.9
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 652 LIVGGEXSNLSIWDLASPTPXIKXXXXF 735
L GG+ +LSIW A P P + F
Sbjct: 294 LACGGQDRSLSIWSSALPRPLLSCQNVF 321
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 25.8 bits (54), Expect = 6.9
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +1
Query: 616 IRSVKLLPDGRTLIVGGEXSNLSIWD 693
I V+ PDGR L+ G ++W+
Sbjct: 84 INVVRWTPDGRRLLTGSSTGEFTLWN 109
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 25.8 bits (54), Expect = 6.9
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = +1
Query: 607 DNYIRSVKLLPDGRTLIVGGEXSNLSIWDLASPTPXIK 720
D I + P G + GG + +WDL P I+
Sbjct: 546 DAGINMAQWQPKGNLFVTGGSDGIVKVWDLRLNNPFIQ 583
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.131 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,711,847
Number of Sequences: 5004
Number of extensions: 50633
Number of successful extensions: 219
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 375345278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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