SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_H10
         (848 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U08895-1|AAA81637.1|  387|Homo sapiens adhalin protein.                58   3e-08
L35853-1|AAA50461.1|  263|Homo sapiens adhalin-35 protein.             58   3e-08
L34355-1|AAA35510.1|  387|Homo sapiens 50 kD dystrophin-associat...    58   3e-08
BC025702-1|AAH25702.1|  387|Homo sapiens sarcoglycan, alpha (50k...    58   3e-08
L46810-1|AAC37583.1|  214|Homo sapiens adhalin protein.                57   7e-08
BC021709-1|AAH21709.1|  437|Homo sapiens sarcoglycan, epsilon pr...    48   6e-05
AY359042-1|AAQ89401.1|  437|Homo sapiens SGCE protein.                 48   6e-05
AJ000534-1|CAA04167.1|  437|Homo sapiens epsilon-sarcoglycan pro...    48   6e-05
AF516515-1|AAM64204.1|  437|Homo sapiens mutant epsilon-sarcogly...    48   6e-05
AF036364-1|AAC04368.1|  413|Homo sapiens epsilon-sarcoglycan pro...    48   6e-05
AC069292-1|AAS07485.1|  437|Homo sapiens unknown protein.              48   6e-05
AB117974-1|BAD21206.1|  427|Homo sapiens brain epsilon-sarcoglyc...    48   6e-05
BC037399-1|AAH37399.1|  446|Homo sapiens KIAA0415 protein protein.     34   0.57 
AB007875-1|BAA24845.1|  634|Homo sapiens KIAA0415 protein.             34   0.57 

>U08895-1|AAA81637.1|  387|Homo sapiens adhalin protein.
          Length = 387

 Score = 58.4 bits (135), Expect = 3e-08
 Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = +3

Query: 345 FHASLLGKPELPQWLHYIYSGRHHSGFIFGTPPRGTEGPLTLEVIGLNRQDFETRRVLLT 524
           +HA L G P+LP+WL Y     HH GF++G+      G   +EV   NR  F+T R  L 
Sbjct: 62  YHAHLQGHPDLPRWLRYTQRSPHHPGFLYGSATPEDRGLQVIEVTAYNRDSFDTTRQRLV 121

Query: 525 L-XGREEG 545
           L  G  EG
Sbjct: 122 LEIGDPEG 129


>L35853-1|AAA50461.1|  263|Homo sapiens adhalin-35 protein.
          Length = 263

 Score = 58.4 bits (135), Expect = 3e-08
 Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = +3

Query: 345 FHASLLGKPELPQWLHYIYSGRHHSGFIFGTPPRGTEGPLTLEVIGLNRQDFETRRVLLT 524
           +HA L G P+LP+WL Y     HH GF++G+      G   +EV   NR  F+T R  L 
Sbjct: 62  YHAHLQGHPDLPRWLRYTQRSPHHPGFLYGSATPEDRGLQVIEVTAYNRDSFDTTRQRLV 121

Query: 525 L-XGREEG 545
           L  G  EG
Sbjct: 122 LEIGDPEG 129


>L34355-1|AAA35510.1|  387|Homo sapiens 50 kD dystrophin-associated
           glycoprotein precursor protein.
          Length = 387

 Score = 58.4 bits (135), Expect = 3e-08
 Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = +3

Query: 345 FHASLLGKPELPQWLHYIYSGRHHSGFIFGTPPRGTEGPLTLEVIGLNRQDFETRRVLLT 524
           +HA L G P+LP+WL Y     HH GF++G+      G   +EV   NR  F+T R  L 
Sbjct: 62  YHAHLQGHPDLPRWLRYTQRSPHHPGFLYGSATPEDRGLQVIEVTAYNRDSFDTTRQRLV 121

Query: 525 L-XGREEG 545
           L  G  EG
Sbjct: 122 LEIGDPEG 129


>BC025702-1|AAH25702.1|  387|Homo sapiens sarcoglycan, alpha (50kDa
           dystrophin-associated glycoprotein) protein.
          Length = 387

 Score = 58.4 bits (135), Expect = 3e-08
 Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = +3

Query: 345 FHASLLGKPELPQWLHYIYSGRHHSGFIFGTPPRGTEGPLTLEVIGLNRQDFETRRVLLT 524
           +HA L G P+LP+WL Y     HH GF++G+      G   +EV   NR  F+T R  L 
Sbjct: 62  YHAHLQGHPDLPRWLRYTQRSPHHPGFLYGSATPEDRGLQVIEVTAYNRDSFDTTRQRLV 121

Query: 525 L-XGREEG 545
           L  G  EG
Sbjct: 122 LEIGDPEG 129


>L46810-1|AAC37583.1|  214|Homo sapiens adhalin protein.
          Length = 214

 Score = 57.2 bits (132), Expect = 7e-08
 Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = +3

Query: 345 FHASLLGKPELPQWLHYIYSGRHHSGFIFGTPPRGTEGPLTLEVIGLNRQDFETRRVLLT 524
           +HA L G P+LP+WL Y     HH GF++G+      G   +EV   NR  F+T R  L 
Sbjct: 62  YHAHLQGHPDLPRWLCYTQRSPHHPGFLYGSATPEDRGLQVIEVTAYNRDSFDTTRQRLV 121

Query: 525 L-XGREEG 545
           L  G  EG
Sbjct: 122 LEIGDPEG 129


>BC021709-1|AAH21709.1|  437|Homo sapiens sarcoglycan, epsilon
           protein.
          Length = 437

 Score = 47.6 bits (108), Expect = 6e-05
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = +3

Query: 345 FHASLLGKPELPQWLHYIYSGRHHSGFIFGTPPRGTEG-PLTLEVIGLNRQDFETRR 512
           F+ +L+G P+ P WL YI    +  G ++G+P     G P  +E+   NR+ FET R
Sbjct: 87  FNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTAENVGKPTIIEITAYNRRTFETAR 143


>AY359042-1|AAQ89401.1|  437|Homo sapiens SGCE protein.
          Length = 437

 Score = 47.6 bits (108), Expect = 6e-05
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = +3

Query: 345 FHASLLGKPELPQWLHYIYSGRHHSGFIFGTPPRGTEG-PLTLEVIGLNRQDFETRR 512
           F+ +L+G P+ P WL YI    +  G ++G+P     G P  +E+   NR+ FET R
Sbjct: 87  FNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTAENVGKPTIIEITAYNRRTFETAR 143


>AJ000534-1|CAA04167.1|  437|Homo sapiens epsilon-sarcoglycan
           protein.
          Length = 437

 Score = 47.6 bits (108), Expect = 6e-05
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = +3

Query: 345 FHASLLGKPELPQWLHYIYSGRHHSGFIFGTPPRGTEG-PLTLEVIGLNRQDFETRR 512
           F+ +L+G P+ P WL YI    +  G ++G+P     G P  +E+   NR+ FET R
Sbjct: 87  FNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTAENVGKPTIIEITAYNRRTFETAR 143


>AF516515-1|AAM64204.1|  437|Homo sapiens mutant epsilon-sarcoglycan
           protein.
          Length = 437

 Score = 47.6 bits (108), Expect = 6e-05
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = +3

Query: 345 FHASLLGKPELPQWLHYIYSGRHHSGFIFGTPPRGTEG-PLTLEVIGLNRQDFETRR 512
           F+ +L+G P+ P WL YI    +  G ++G+P     G P  +E+   NR+ FET R
Sbjct: 87  FNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTAENVGKPTIIEITAYNRRTFETAR 143


>AF036364-1|AAC04368.1|  413|Homo sapiens epsilon-sarcoglycan
           protein.
          Length = 413

 Score = 47.6 bits (108), Expect = 6e-05
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = +3

Query: 345 FHASLLGKPELPQWLHYIYSGRHHSGFIFGTPPRGTEG-PLTLEVIGLNRQDFETRR 512
           F+ +L+G P+ P WL YI    +  G ++G+P     G P  +E+   NR+ FET R
Sbjct: 63  FNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTAENVGKPTIIEITAYNRRTFETAR 119


>AC069292-1|AAS07485.1|  437|Homo sapiens unknown protein.
          Length = 437

 Score = 47.6 bits (108), Expect = 6e-05
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = +3

Query: 345 FHASLLGKPELPQWLHYIYSGRHHSGFIFGTPPRGTEG-PLTLEVIGLNRQDFETRR 512
           F+ +L+G P+ P WL YI    +  G ++G+P     G P  +E+   NR+ FET R
Sbjct: 87  FNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTAENVGKPTIIEITAYNRRTFETAR 143


>AB117974-1|BAD21206.1|  427|Homo sapiens brain epsilon-sarcoglycan
           protein.
          Length = 427

 Score = 47.6 bits (108), Expect = 6e-05
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = +3

Query: 345 FHASLLGKPELPQWLHYIYSGRHHSGFIFGTPPRGTEG-PLTLEVIGLNRQDFETRR 512
           F+ +L+G P+ P WL YI    +  G ++G+P     G P  +E+   NR+ FET R
Sbjct: 63  FNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTAENVGKPTIIEITAYNRRTFETAR 119


>BC037399-1|AAH37399.1|  446|Homo sapiens KIAA0415 protein protein.
          Length = 446

 Score = 34.3 bits (75), Expect = 0.57
 Identities = 24/54 (44%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = +3

Query: 351 ASLLGKPELPQWLHY--IYSGRHHSGFIFGTPPRGTEGPLTLEVIGLNRQDFET 506
           A+LL K  L  WL Y  +  G  HSG  F TP     GP+T EV G    DF T
Sbjct: 17  ATLLSK-RLVDWLRYASLQQGLPHSGGFFSTPRARQPGPVT-EVDGAVATDFFT 68


>AB007875-1|BAA24845.1|  634|Homo sapiens KIAA0415 protein.
          Length = 634

 Score = 34.3 bits (75), Expect = 0.57
 Identities = 24/54 (44%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = +3

Query: 351 ASLLGKPELPQWLHY--IYSGRHHSGFIFGTPPRGTEGPLTLEVIGLNRQDFET 506
           A+LL K  L  WL Y  +  G  HSG  F TP     GP+T EV G    DF T
Sbjct: 194 ATLLSK-RLVDWLRYASLQQGLPHSGGFFSTPRARQPGPVT-EVDGAVATDFFT 245


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,405,963
Number of Sequences: 237096
Number of extensions: 2096376
Number of successful extensions: 3942
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3935
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -