Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_H10
         (848 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071690-1|AAL49312.1|  443|Drosophila melanogaster RH11377p pro...   106   4e-23
AF277391-1|AAG17400.1|  358|Drosophila melanogaster alpha/epsilo...   106   4e-23
AE014134-1453|AAF52634.1|  443|Drosophila melanogaster CG7851-PA...   106   4e-23

>AY071690-1|AAL49312.1|  443|Drosophila melanogaster RH11377p
           protein.
          Length = 443

 Score =  106 bits (254), Expect = 4e-23
 Identities = 43/86 (50%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
 Frame = +3

Query: 273 EMFAIPISPNLFNWTYQEFDQQYRFHASLLGKPELPQWLHYIYSGRHHSGFIFGTPPRGT 452
           E+F   I P LFNWT+Q   QQ+R+  SL   P+LP W+ Y+YS  +H+GF++GTPP  +
Sbjct: 29  ELFTYKIEPQLFNWTHQVISQQFRYRPSLKNYPDLPSWMRYMYSHEYHAGFLYGTPPASS 88

Query: 453 EG-PLTLEVIGLNRQDFETRRVLLTL 527
            G  L+L+V+ LNRQ++ETRRV++T+
Sbjct: 89  AGKDLSLDVVALNRQNYETRRVVVTM 114


>AF277391-1|AAG17400.1|  358|Drosophila melanogaster
           alpha/epsilon-sarcoglycan-likeprotein SCG-ALPHA/EPSILON
           protein.
          Length = 358

 Score =  106 bits (254), Expect = 4e-23
 Identities = 43/86 (50%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
 Frame = +3

Query: 273 EMFAIPISPNLFNWTYQEFDQQYRFHASLLGKPELPQWLHYIYSGRHHSGFIFGTPPRGT 452
           E+F   I P LFNWT+Q   QQ+R+  SL   P+LP W+ Y+YS  +H+GF++GTPP  +
Sbjct: 29  ELFTYKIEPQLFNWTHQVISQQFRYRPSLKNYPDLPSWMRYMYSHEYHAGFLYGTPPASS 88

Query: 453 EG-PLTLEVIGLNRQDFETRRVLLTL 527
            G  L+L+V+ LNRQ++ETRRV++T+
Sbjct: 89  AGKDLSLDVVALNRQNYETRRVVVTM 114


>AE014134-1453|AAF52634.1|  443|Drosophila melanogaster CG7851-PA
           protein.
          Length = 443

 Score =  106 bits (254), Expect = 4e-23
 Identities = 43/86 (50%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
 Frame = +3

Query: 273 EMFAIPISPNLFNWTYQEFDQQYRFHASLLGKPELPQWLHYIYSGRHHSGFIFGTPPRGT 452
           E+F   I P LFNWT+Q   QQ+R+  SL   P+LP W+ Y+YS  +H+GF++GTPP  +
Sbjct: 29  ELFTYKIEPQLFNWTHQVISQQFRYRPSLKNYPDLPSWMRYMYSHEYHAGFLYGTPPASS 88

Query: 453 EG-PLTLEVIGLNRQDFETRRVLLTL 527
            G  L+L+V+ LNRQ++ETRRV++T+
Sbjct: 89  AGKDLSLDVVALNRQNYETRRVVVTM 114


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,250,263
Number of Sequences: 53049
Number of extensions: 588910
Number of successful extensions: 1405
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1402
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4065385896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)